| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF7066 | | Two-component transcriptional response regulator receiver domain | insig. | 100 | 100 |
| o | Variovorax sp. OAS795 | ABID97_RS20960 | | response regulator transcription factor | insig. | 81 | 98 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3853 | | Response regulator receiver | no data | 59 | 94 |
| | Variovorax sp. SCN45 | GFF2565 | | Two-component transcriptional response regulator receiver domain | insig. | 59 | 92 |
| | Variovorax sp. OAS795 | ABID97_RS16560 | | response regulator | sig. | 53 | 98 |
| | Variovorax sp. OAS795 | ABID97_RS07365 | | response regulator | insig. | 54 | 98 |
| | Variovorax sp. SCN45 | GFF236 | | Two-component transcriptional response regulator receiver domain | cofit | 52 | 98 |
| | Variovorax sp. SCN45 | GFF6065 | | Two-component transcriptional response regulator receiver domain | insig. | 50 | 98 |
| | Variovorax sp. OAS795 | ABID97_RS22655 | | response regulator transcription factor | no data | 47 | 96 |
| | Variovorax sp. OAS795 | ABID97_RS28665 | | response regulator | insig. | 54 | 94 |
| | Variovorax sp. SCN45 | GFF653 | | no description | insig. | 44 | 98 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2785 | | Response regulator receiver | sig. | 49 | 95 |
| | Variovorax sp. SCN45 | GFF1442 | | no description | no data | 41 | 99 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10595 | | response regulator | insig. | 39 | 94 |
| o | Ralstonia solanacearum UW163 | UW163_RS02985 | | response regulator | insig. | 39 | 94 |
| o | Ralstonia solanacearum GMI1000 | RS_RS01430 | | response regulator | insig. | 38 | 94 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS22725 | | response regulator | insig. | 38 | 94 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS06395 | | response regulator | strong | 38 | 94 |
| o | Methylophilus sp. DMC18 | GFF87 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | no data | 31 | 94 |
| | Paraburkholderia graminis OAS925 | ABIE53_002843 | | DNA-binding NarL/FixJ family response regulator | sig. | 37 | 90 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00411 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | no data | 38 | 90 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS00790 | | chemotaxis protein CheY | strong | 36 | 99 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06020 | | response regulator | insig. | 34 | 94 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS13145 | | chemotaxis protein CheY | no data | 36 | 90 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS05530 | | response regulator | strong | 33 | 90 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1948 | | Transcriptional regulatory protein UhpA | insig. | 32 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS36965 | | response regulator transcription factor | no data | 32 | 96 |
| | Lysobacter sp. OAE881 | ABIE51_RS10320 | | response regulator transcription factor | insig. | 31 | 95 |
| | Alteromonas macleodii MIT1002 | MIT1002_01198 | | Transcriptional activator protein ExaE | insig. | 29 | 94 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 28 | 99 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 28 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS05525 | | response regulator transcription factor | insig. | 25 | 98 |
| | Methylophilus sp. DMC18 | GFF88 | | Response regulator UvrY | insig. | 25 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00410 | | two component transcriptional regulator, LuxR family | insig. | 24 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_002843 | | DNA-binding NarL/FixJ family response regulator | sig. | 24 | 98 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2107 | | response regulator receiver protein (RefSeq) | strong | 29 | 90 |
| | Lysobacter sp. OAE881 | ABIE51_RS10325 | | response regulator transcription factor | insig. | 28 | 98 |
| | Pectobacterium carotovorum WPP14 | HER17_RS07710 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 26 | 98 |
| | Erwinia amylovora T8 | OLJFJH_15795 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 25 | 98 |
| | Paraburkholderia graminis OAS925 | ABIE53_000448 | | two-component system invasion response regulator UvrY | strong | 28 | 96 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS10720 | | response regulator transcription factor | insig. | 30 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS10720 | | response regulator transcription factor | insig. | 30 | 97 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06015 | | hisitidine kinase | strong | 25 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_24485 | | regulator | insig. | 31 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS00785 | | LuxR family transcriptional regulator | insig. | 27 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02179 | | two component transcriptional regulator, LuxR family | cofit | 27 | 96 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS13150 | | hisitidine kinase | no data | 23 | 98 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2397.1 | | two-component system regulatory protein | insig. | 34 | 94 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS00505 | | response regulator transcription factor RqpR | strong | 26 | 96 |
| | Rahnella sp. WP5 | EX31_RS24145 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 26 | 94 |
| | Variovorax sp. OAS795 | ABID97_RS22515 | | response regulator transcription factor | strong | 30 | 86 |
| | Dechlorosoma suillum PS | Dsui_3469 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 29 | 94 |
| | Shewanella sp. ANA-3 | Shewana3_1608 | | response regulator (RefSeq) | strong | 27 | 92 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3917 | | two component transcriptional regulator, LuxR family | insig. | 31 | 85 |
| | Shewanella oneidensis MR-1 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 27 | 92 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3359 | | response regulatory protein | sig. | 34 | 86 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3303 | lon | ATP-dependent protease La, truncation (TIGR) | cofit | 28 | 95 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS16955 | | response regulator transcription factor | insig. | 28 | 95 |
| | Shewanella amazonensis SB2B | Sama_1607 | | response regulator (RefSeq) | strong | 28 | 92 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS01790 | | LuxR family transcriptional regulator | strong | 26 | 96 |
| | Lysobacter sp. OAE881 | ABIE51_RS10620 | | response regulator transcription factor | insig. | 27 | 99 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_06135 | | two-component system response regulator UvrY | no data | 26 | 95 |
| | Dickeya dianthicola 67-19 | HGI48_RS13800 | | UvrY/SirA/GacA family response regulator transcription factor | cofit | 24 | 98 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3272 | | DNA-binding response regulator, LuxR family | insig. | 34 | 94 |
| | Variovorax sp. SCN45 | GFF5818 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 31 | 86 |
| | Dickeya dadantii 3937 | DDA3937_RS13705 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 24 | 98 |
| | Dickeya dianthicola ME23 | DZA65_RS14290 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 24 | 98 |
| | Dechlorosoma suillum PS | Dsui_2158 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | cofit | 28 | 87 |
| | Shewanella loihica PV-4 | Shew_1824 | | response regulator (RefSeq) | no data | 26 | 96 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_25245 | | regulator | strong | 31 | 85 |
| | Ralstonia solanacearum GMI1000 | RS_RS01435 | | DNA-binding response regulator | strong | 24 | 94 |
| | Variovorax sp. SCN45 | GFF5597 | | Two-component transcriptional response regulator, LuxR family | insig. | 27 | 89 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS14960 | erdR;inference=COORDINATES | response regulator transcription factor ErdR | strong | 29 | 90 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18400 | | DNA-binding response regulator | strong | 29 | 90 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42170 | erdR;inference=COORDINATES | response regulator transcription factor ErdR | strong | 29 | 90 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_1932 | | Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain | strong | 31 | 56 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS06400 | | response regulator transcription factor | strong | 24 | 94 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10600 | | DNA-binding response regulator | strong | 24 | 94 |
| | Ralstonia solanacearum UW163 | UW163_RS02980 | | DNA-binding response regulator | strong | 24 | 94 |
| | Serratia liquefaciens MT49 | IAI46_18680 | | two-component system response regulator NarL | insig. | 30 | 98 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS05670 | | response regulator transcription factor | strong | 30 | 90 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4833 | | DNA-binding response regulator, LuxR family | sig. | 29 | 97 |
| | Rhodopseudomonas palustris CGA009 | TX73_009945 | | response regulator transcription factor | insig. | 27 | 98 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS11155 | | DNA-binding response regulator | cofit | 26 | 84 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3685 | | DNA-binding response regulator, LuxR family | insig. | 26 | 96 |
| | Pseudomonas sp. SVBP6 | COO64_RS09150 | | response regulator transcription factor | insig. | 30 | 91 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS08970 | | response regulator transcription factor | insig. | 27 | 91 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05910 | | response regulator transcription factor | no data | 26 | 90 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05910 | | response regulator transcription factor | sig. | 26 | 90 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS22720 | | DNA-binding response regulator | strong | 24 | 94 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02223 | | Virulence factors putative positive transcription regulator BvgA | insig. | 30 | 97 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS09955 | | response regulator | insig. | 28 | 87 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0247 | ntrX | response regulator (TIGR) | strong | 29 | 75 |
| | Shewanella loihica PV-4 | Shew_3506 | | two component LuxR family transcriptional regulator (RefSeq) | insig. | 27 | 90 |
| | Escherichia coli ECOR27 | NOLOHH_16440 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | strong | 26 | 94 |
| | Escherichia coli ECRC62 | BNILDI_15230 | uvrY | UvrY/SirA/GacA family response regulator transcription factor | insig. | 26 | 94 |
| | Escherichia coli BW25113 | b1914 | uvrY | response regulator (NCBI) | strong | 26 | 94 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01339 | | Transcriptional regulatory protein LnrK | cofit | 26 | 95 |
| | Serratia liquefaciens MT49 | IAI46_09205 | | UvrY/SirA/GacA family response regulator transcription factor | strong | 25 | 94 |
| | Pseudomonas simiae WCS417 | PS417_24945 | | LuxR family transcriptional regulator | insig. | 32 | 94 |