Homologs of GFF4819 from Xanthobacter sp. DMC5

Tyrosine recombinase XerC
SEED: Integrase

142 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF4819 Tyrosine recombinase XerC insig. 100 100
  Xanthobacter sp. DMC5 GFF2699 Tyrosine recombinase XerC insig. 39 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2604 Site-specific recombinase XerD insig. 36 96
  Xanthobacter sp. DMC5 GFF3621 Tyrosine recombinase XerC insig. 33 100
  Xanthobacter sp. DMC5 GFF2731 hypothetical protein insig. 41 65
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11865 tyrosine-type recombinase/integrase insig. 32 96
  Dinoroseobacter shibae DFL-12 Dshi_0395 integrase family protein (RefSeq) insig. 32 97
  Phaeobacter inhibens DSM 17395 PGA1_c00260 putative phage integrase, catalytic core insig. 33 92
  Azospirillum brasilense Sp245 AZOBR_RS24420 integrase insig. 30 91
  Azospirillum brasilense Sp245 AZOBR_RS30360 integrase insig. 29 92
  Dickeya dianthicola 67-19 HGI48_RS04125 tyrosine-type recombinase/integrase insig. 27 92
  Variovorax sp. SCN45 GFF7326 Integrase insig. 26 92
  Dinoroseobacter shibae DFL-12 Dshi_3213 integrase family protein (RefSeq) insig. 27 96
  Ralstonia solanacearum GMI1000 RS_RS13140 DUF4102 domain-containing protein insig. 26 99
  Shewanella oneidensis MR-1 SOA0044 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 27 98
  Shewanella sp. ANA-3 Shewana3_1244 phage integrase family protein (RefSeq) insig. 25 99
  Castellaniella sp019104865 MT123 ABCV34_RS15835 site-specific integrase insig. 25 92
  Variovorax sp. SCN45 GFF4896 Integrase insig. 27 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4150 Integrase insig. 26 92
  Pseudomonas aeruginosa PA14 IKLFDK_12665 integrase sig. 25 92
  Shewanella oneidensis MR-1 SO_A0045 site-specific recombinase, phage integrase family (NCBI) insig. 27 92
  Acinetobacter radioresistens SK82 MPMX26_01846 hypothetical protein no data 25 96
  Magnetospirillum magneticum AMB-1 AMB_RS20435 DUF4102 domain-containing protein insig. 23 86
  Erwinia tracheiphila SCR3 LU632_RS03400 integrase family protein insig. 25 92
  Acinetobacter baumannii LAC-4 RR41_RS09210 integrase family protein insig. 26 96
  Klebsiella pneumoniae MKP103 KDGMDA_19720 integrase insig. 24 91
  Klebsiella pneumoniae MRSN742743 KFA93_RS20210 tyrosine-type recombinase/integrase insig. 24 91
  Magnetospirillum magneticum AMB-1 AMB_RS03365 site-specific integrase insig. 25 92
  Kangiella aquimarina DSM 16071 B158DRAFT_0218 Site-specific recombinase XerD insig. 24 92
  Klebsiella michiganensis M5al BWI76_RS12025 integrase insig. 23 85
  Ralstonia solanacearum PSI07 RPSI07_RS12430 DUF4102 domain-containing protein insig. 24 90
  Escherichia coli BW25113 b2442 intZ CPZ-55 prophage; predicted integrase (RefSeq) insig. 26 90
  Azospirillum sp. SherDot2 MPMX19_02360 Prophage integrase IntA cofit 24 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_757 phage-related integrase insig. 27 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4378 Integrase insig. 26 83
  Rhodopseudomonas palustris CGA009 TX73_021145 site-specific integrase insig. 30 59
  Magnetospirillum magneticum AMB-1 AMB_RS24300 DUF4102 domain-containing protein cofit 24 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_15355 integrase insig. 26 84
  Castellaniella sp019104865 MT123 ABCV34_RS11900 tyrosine-type recombinase/integrase insig. 23 90
  Pseudomonas stutzeri RCH2 Psest_3052 Site-specific recombinase XerD insig. 28 51
  Pseudomonas aeruginosa PA14 IKLFDK_19405 integrase insig. 24 84
  Ralstonia solanacearum UW163 UW163_RS08775 integrase insig. 24 89
  Ralstonia solanacearum GMI1000 RS_RS12480 DUF4102 domain-containing protein insig. 23 90
  Pseudomonas sp. BP01 JOY50_RS26295 integrase arm-type DNA-binding domain-containing protein insig. 31 47
  Pseudomonas aeruginosa PUPa3 DQ20_RS43980 tyrosine-type recombinase/integrase insig. 30 52
  Acidovorax sp. GW101-3H11 Ac3H11_54 Integrase insig. 26 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_04365 integrase insig. 25 57
  Pseudomonas stutzeri RCH2 Psest_1102 Integrase insig. 23 82
  Acinetobacter baumannii LAC-4 RR41_RS08440 tyrosine-type recombinase/integrase insig. 21 89
  Escherichia coli BW25113 b0281 intF CP4-6 prophage; predicted phage integrase (NCBI) insig. 23 88
  Pseudomonas orientalis W4I3 QF045_RS04535 tyrosine-type recombinase/integrase insig. 27 66
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 25 48
  Acidovorax sp. GW101-3H11 Ac3H11_2470 putative phage integrase insig. 24 96
  Pseudomonas aeruginosa PA14 IKLFDK_03615 Putative integrase sig. 27 48
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3004 Integrase insig. 25 43
  Pseudomonas sp. SVBP6 COO64_RS11155 phage integrase central domain-containing protein insig. 28 34
  Escherichia coli ECOR38 HEPCGN_04445 xerD integrase insig. 29 50
  Escherichia coli ECRC100 OKFHMN_26010 xerD integrase insig. 29 50
  Escherichia coli ECRC101 MCAODC_19380 xerD integrase insig. 29 50
  Escherichia coli ECRC98 JDDGAC_00600 xerD integrase insig. 29 50
  Escherichia coli ECRC99 KEDOAH_02080 xerD integrase no data 29 50
  Pseudomonas aeruginosa MRSN321 DY961_RS08885 tyrosine-type recombinase/integrase cofit 27 50
  Escherichia coli ECRC102 NIAGMN_02040 xerD integrase insig. 29 50
  Pseudomonas sp. DMC3 GFF4361 Prophage integrase IntA cofit 25 43
  Pseudomonas aeruginosa PUPa3 DQ20_RS55485 tyrosine-type recombinase/integrase insig. 31 38
  Dickeya dadantii 3937 DDA3937_RS09105 tyrosine-type recombinase/integrase insig. 25 89
  Cupriavidus basilensis FW507-4G11 RR42_RS19640 hypothetical protein insig. 29 43
  Acinetobacter baumannii LAC-4 RR41_RS17765 site-specific tyrosine recombinase XerD no data 26 47
  Sinorhizobium meliloti 1021 SMc00691 site-specific tyrosine recombinase XerD sig. 27 51
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00507 Prophage integrase IntA cofit 24 66
  Phaeobacter inhibens DSM 17395 PGA1_c30770 putative phage integrase insig. 24 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4358 Integrase insig. 26 82
  Acinetobacter radioresistens SK82 MPMX26_02861 Prophage integrase IntS insig. 20 89
  Shewanella sp. ANA-3 Shewana3_2953 phage integrase family protein (RefSeq) cofit 20 83
  Agrobacterium fabrum C58 Atu1194 phage-related integrase insig. 26 63
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02610 site-specific integrase insig. 25 49
  Serratia liquefaciens MT49 IAI46_09295 tyrosine-type recombinase/integrase insig. 20 89
  Acinetobacter baumannii LAC-4 RR41_RS08125 site-specific integrase insig. 23 56
  Pectobacterium carotovorum WPP14 HER17_RS18625 tyrosine-type recombinase/integrase cofit 31 37
  Cupriavidus basilensis FW507-4G11 RR42_RS18650 preprotein translocase insig. 25 65
  Phaeobacter inhibens DSM 17395 PGA1_c19240 putative phage integrase protein insig. 26 39
  Pseudomonas simiae WCS417 PS417_10250 integrase insig. 23 85
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS01440 tyrosine-type recombinase/integrase insig. 31 40
  Pseudomonas aeruginosa PUPa3 DQ20_RS43310 tyrosine-type recombinase/integrase insig. 22 91
  Pseudomonas syringae pv. syringae B728a Psyr_1286 tyrosine recombinase XerD subunit sig. 27 40
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1286 tyrosine recombinase XerD subunit sig. 27 40
  Escherichia fergusonii Becca EFB2_01976 Prophage integrase IntA insig. 25 73
  Escherichia coli Nissle 1917 ECOLIN_RS11220 site-specific integrase insig. 25 73
  Pseudomonas sp. RS175 PFR28_00331 Tyrosine recombinase XerD strong 27 40
  Shewanella amazonensis SB2B Sama_2739 integrase/recombinase XerD (RefSeq) strong 27 47
  Enterobacter sp. TBS_079 MPMX20_03950 Tyrosine recombinase XerC strong 29 33
  Enterobacter sp. TBS_079 MPMX20_00413 Prophage integrase IntS insig. 26 57
  Acinetobacter radioresistens SK82 MPMX26_00169 Tyrosine recombinase XerD no data 26 47
  Desulfovibrio vulgaris Hildenborough JW710 DVU2828 site-specific recombinase, phage integrase family (TIGR) insig. 23 69
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04165 site-specific tyrosine recombinase XerD no data 31 19
  Erwinia tracheiphila SCR3 LU632_RS06490 site-specific integrase insig. 27 45
  Ralstonia solanacearum UW163 UW163_RS10310 integrase insig. 23 91
  Pseudomonas sp. S08-1 OH686_17750 tyrosine recombinase XerD insig. 26 48
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_16730 Prophage p4 integrase no data 25 45
  Dickeya dadantii 3937 DDA3937_RS04115 site-specific integrase insig. 29 33
  Dickeya dianthicola ME23 DZA65_RS04005 site-specific integrase insig. 29 33
  Shewanella sp. ANA-3 Shewana3_3331 tyrosine recombinase XerD (RefSeq) strong 28 35
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS04515 tyrosine-type recombinase/integrase cofit 23 90
  Dickeya dianthicola 67-19 HGI48_RS04290 tyrosine-type recombinase/integrase insig. 37 22
  Paraburkholderia graminis OAS925 ABIE53_001680 integrase insig. 26 44
  Pseudomonas simiae WCS417 PS417_22895 tyrosine recombinase XerD strong 27 40
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS02275 integrase arm-type DNA-binding domain-containing protein insig. 23 83
  Dinoroseobacter shibae DFL-12 Dshi_1611 integrase family protein (RefSeq) strong 43 11
  Magnetospirillum magneticum AMB-1 AMB_RS19880 site-specific tyrosine recombinase XerD cofit 37 18
  Azospirillum sp. SherDot2 MPMX19_02643 Tyrosine recombinase XerD no data 34 17
  Pseudomonas segetis P6 ACVTMO_RS06550 phage integrase insig. 28 43
  Pseudomonas protegens RBAN4 FABNJH_05695 xerD site-specific tyrosine recombinase XerD insig. 27 40
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3011 Tyrosine recombinase XerD insig. 27 40
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1721 Tyrosine recombinase XerD strong 26 40
  Pseudomonas fluorescens FW300-N2C3 AO356_06385 recombinase XerD strong 26 40
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3145 Tyrosine recombinase XerD no data 26 40
  Rhodanobacter sp. FW510-T8 OKGIIK_15325 xerC tyrosine recombinase XerC insig. 28 47
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04729 Tyrosine recombinase XerD cofit 26 40
  Agrobacterium fabrum C58 Atu3629 site-specific tyrosine recombinase XerD no data 32 18
  Pseudomonas sp. DMC3 GFF1987 Tyrosine recombinase XerD insig. 26 40
  Pseudomonas simiae WCS417 PS417_00885 integrase insig. 23 84
  Pseudomonas fluorescens FW300-N2E3 AO353_04365 recombinase XerD strong 26 40
  Pseudomonas fluorescens SBW25 PFLU_RS00900 tyrosine-type recombinase/integrase insig. 24 84
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00900 tyrosine-type recombinase/integrase insig. 24 84
  Xanthobacter sp. DMC5 GFF2054 Tyrosine recombinase XerC no data 45 11
  Sinorhizobium meliloti 1021 SMc02489 site-specific tyrosine recombinase XerC no data 44 12
  Pseudomonas aeruginosa PA14 IKLFDK_05595 integrase insig. 31 33
  Azospirillum brasilense Sp245 AZOBR_RS15305 putative phage integrase insig. 23 49
  Shewanella oneidensis MR-1 SO0950 xerD integrase/recombinase XerD (NCBI ptt file) strong 28 35
  Dickeya dianthicola 67-19 HGI48_RS05235 tyrosine-type recombinase/integrase insig. 28 38
  Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD strong 28 40
  Pseudomonas orientalis W4I3 QF045_RS25085 site-specific tyrosine recombinase XerD cofit 26 40
  Serratia liquefaciens MT49 IAI46_13845 tyrosine-type recombinase/integrase insig. 25 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS39870 tyrosine-type recombinase/integrase insig. 32 32
  Pseudomonas fluorescens SBW25 PFLU_RS24560 site-specific tyrosine recombinase XerD sig. 27 40
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24560 site-specific tyrosine recombinase XerD strong 27 40
  Castellaniella sp019104865 MT123 ABCV34_RS03400 integrase arm-type DNA-binding domain-containing protein insig. 21 59
  Xanthobacter sp. DMC5 GFF3081 Tyrosine recombinase XerD no data 36 19
  Rhodopseudomonas palustris CGA009 TX73_000945 tyrosine recombinase XerC sig. 32 32
  Rhizobium sp. OAE497 ABIE40_RS17950 tyrosine recombinase XerC insig. 48 12
  Phaeobacter inhibens DSM 17395 PGA1_c05760 putative tyrosine recombinase XerC strong 47 11
  Pseudomonas sp. SVBP6 COO64_RS20275 site-specific integrase insig. 24 26