Homologs of PS417_24230 from Pseudomonas simiae WCS417

ATP-dependent protease
SEED: ATP-dependent protease La (EC 3.4.21.53) Type II

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_24230 ATP-dependent protease strong 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS26150 ATP-binding protein strong 100 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26150 ATP-binding protein strong 100 100
o Pseudomonas fluorescens FW300-N2E3 AO353_14055 ATP-dependent protease sig. 94 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1459 ATP-dependent protease La (EC 3.4.21.53) Type II insig. 93 100
o Pseudomonas fluorescens FW300-N2C3 AO356_15765 ATP-dependent protease insig. 95 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5093 ATP-dependent protease La (EC 3.4.21.53) Type II sig. 94 100
o Pseudomonas sp. RS175 PFR28_03779 hypothetical protein strong 94 100
o Pseudomonas syringae pv. syringae B728a Psyr_4259 ATP-dependent protease, putative insig. 91 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4259 ATP-dependent protease, putative insig. 91 97
o Pseudomonas putida KT2440 PP_0680 ATP-dependent protease-like protein strong 87 100
o Pseudomonas stutzeri RCH2 Psest_3396 Predicted ATP-dependent protease sig. 86 96
o Pseudomonas sp. S08-1 OH686_16260 ATP-dependent protease La Type II insig. 84 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2787 ATP-dependent protease La (EC 3.4.21.53) Type II insig. 94 81
o Alteromonas macleodii MIT1002 MIT1002_01859 Lon protease insig. 49 93
o Dechlorosoma suillum PS Dsui_2223 putative ATP-dependent protease insig. 40 99
o Magnetospirillum magneticum AMB-1 AMB_RS02920 ATP-dependent protease cofit 41 95
o Marinobacter adhaerens HP15 HP15_1352 peptidase S16, lon domain protein insig. 39 95
  Marinobacter adhaerens HP15 HP15_1052 peptidase S16, lon domain-containing protein strong 39 95
o Shewanella loihica PV-4 Shew_1976 putative ATP-dependent protease La-relatedprotein (RefSeq) strong 37 94
o Vibrio cholerae E7946 ATCC 55056 CSW01_18990 ATP-dependent protease cofit 35 96
o Shewanella sp. ANA-3 Shewana3_1160 ATP-dependent protease, putative (RefSeq) insig. 37 90
o Acinetobacter radioresistens SK82 MPMX26_01059 Lon protease sig. 35 97
o Shewanella oneidensis MR-1 SO3391 ATP-dependent protease, putative (NCBI ptt file) sig. 36 93
o Shewanella amazonensis SB2B Sama_2406 ATP-dependent protease, putative (RefSeq) strong 36 94
o Desulfovibrio vulgaris Miyazaki F DvMF_0312 peptidase S16 lon domain protein (RefSeq) insig. 34 99
o Desulfovibrio vulgaris Hildenborough JW710 DVU1472 ATP-dependent protease, putative (TIGR) insig. 37 96
  Desulfovibrio vulgaris Hildenborough JW710 DVU1893 ATP-dependent protease, putative (TIGR) sig. 33 91
  Desulfovibrio vulgaris Miyazaki F DvMF_0590 ATP-dependent protease, putative (RefSeq) strong 31 92
  Rhodospirillum rubrum S1H Rru_A3583 ATP-dependent protease-like (NCBI) insig. 44 59
o Acidovorax sp. GW101-3H11 Ac3H11_106 ATP-dependent protease La (EC 3.4.21.53) Type II insig. 34 93
  Serratia liquefaciens MT49 IAI46_08865 Lon protease family protein sig. 40 54
  Shewanella oneidensis MR-1 SO1857 hypothetical ATP-dependent protease (NCBI ptt file) strong 39 57
  Shewanella sp. ANA-3 Shewana3_1607 ATP-dependent protease (RefSeq) strong 38 58
  Shewanella amazonensis SB2B Sama_1606 ATP-dependent protease (RefSeq) sig. 40 55
  Rahnella sp. WP5 EX31_RS18050 Lon protease family protein insig. 41 53
  Erwinia tracheiphila SCR3 LU632_RS10000 Lon protease family protein cofit 38 55
  Pantoea sp. MT58 IAI47_12655 Lon protease family protein sig. 38 53
  Shewanella loihica PV-4 Shew_1818 ATP-dependent protease (RefSeq) no data 39 54
  Vibrio cholerae E7946 ATCC 55056 CSW01_07450 Lon protease family protein insig. 37 55
  Pectobacterium carotovorum WPP14 HER17_RS08410 Lon protease family protein cofit 38 54
  Dickeya dianthicola 67-19 HGI48_RS13315 Lon protease family protein cofit 39 53
  Dickeya dianthicola ME23 DZA65_RS13790 Lon protease family protein insig. 39 53
  Dickeya dadantii 3937 DDA3937_RS13250 Lon protease family protein cofit 39 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2788 ATP-dependent protease La (EC 3.4.21.53) Type II no data 90 18
  Klebsiella michiganensis M5al BWI76_RS09960 Lon protease strong 38 53
  Escherichia coli ECOR38 HEPCGN_23275 ycbZ Putative Lon protease-like protein cofit 37 51
  Escherichia coli BL21 ECD_00959 putative peptidase cofit 37 51
  Escherichia coli ECRC101 OKFHMN_05245 ycbZ Putative Lon protease-like protein insig. 37 51
  Escherichia coli ECRC101 MCAODC_24635 ycbZ Putative Lon protease-like protein insig. 37 51
  Escherichia coli ECRC102 NIAGMN_02965 ycbZ Putative Lon protease-like protein insig. 37 51
  Escherichia coli ECRC98 JDDGAC_08855 ycbZ Putative Lon protease-like protein no data 37 51
  Escherichia coli ECRC99 KEDOAH_22490 ycbZ Putative Lon protease-like protein no data 37 51
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02711 Lon protease cofit 37 51
  Escherichia coli BW25113 b0955 ycbZ predicted peptidase (NCBI) strong 37 51
  Escherichia coli ECOR27 NOLOHH_21800 ycbZ Putative Lon protease-like protein cofit 37 51
  Escherichia coli ECRC62 BNILDI_19965 ycbZ Putative Lon protease-like protein insig. 37 51
  Escherichia coli Nissle 1917 ECOLIN_RS05015 Lon protease family protein insig. 37 51
  Escherichia fergusonii Becca EFB2_03116 Lon protease insig. 37 51
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3246 ATP-dependent protease La (EC 3.4.21.53) Type II cofit 38 51
  Enterobacter sp. TBS_079 MPMX20_01605 Lon protease insig. 36 54
  Enterobacter asburiae PDN3 EX28DRAFT_1988 Predicted ATP-dependent protease cofit 36 54
  Rhodospirillum rubrum S1H Rru_A3583 ATP-dependent protease-like (NCBI) insig. 39 15
  Methanococcus maripaludis JJ MMJJ_RS08245 ATP-dependent protease LonB no data 46 10
  Methanococcus maripaludis S2 MMP_RS06110 ATP-dependent protease LonB strong 46 10
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07320 endopeptidase La strong 28 23
  Dechlorosoma suillum PS Dsui_2198 ATP-dependent protease La strong 29 27
  Marinobacter adhaerens HP15 HP15_2183 DNA-binding ATP-dependent protease La strong 28 25
  Pseudomonas sp. S08-1 OH686_03635 endopeptidase La strong 28 23
  Pseudomonas putida KT2440 PP_2302 DNA-binding, ATP-dependent protease strong 28 23
  Pseudomonas fluorescens FW300-N2E3 AO353_20185 DNA-binding protein strong 29 20
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2554 ATP-dependent protease La (EC 3.4.21.53) Type I strong 29 20
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3947 ATP-dependent protease La (EC 3.4.21.53) Type I no data 28 23
  Rhodanobacter denitrificans MT42 LRK55_RS16460 endopeptidase La strong 28 23
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16735 endopeptidase La strong 28 23
  Pseudomonas fluorescens FW300-N2C3 AO356_01740 DNA-binding protein strong 29 20
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2216 ATP-dependent protease La (EC 3.4.21.53) Type I no data 29 20
  Pseudomonas simiae WCS417 PS417_17225 DNA-binding protein no data 29 20
  Pseudomonas fluorescens SBW25 PFLU_RS19160 endopeptidase La strong 28 23
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19160 endopeptidase La strong 28 23
  Lysobacter sp. OAE881 ABIE51_RS14145 endopeptidase La sig. 28 23
  Pseudomonas stutzeri RCH2 Psest_2285 ATP-dependent protease La strong 30 23
  Pseudomonas syringae pv. syringae B728a Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 strong 41 9
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1749 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 sig. 41 9
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4046.1 ATP-dependent protease La (EC 3.4.21.53) Type I strong 27 23
  Rhodanobacter sp. FW510-T8 OKGIIK_08030 lon endopeptidase La cofit 29 18
  Caulobacter crescentus NA1000 CCNA_02037 ATP-dependent endopeptidase Lon strong 34 13
  Caulobacter crescentus NA1000 Δfur CCNA_02037 ATP-dependent endopeptidase Lon no data 34 13
  Rhodopseudomonas palustris CGA009 TX73_015345 endopeptidase La no data 33 13
  Pseudomonas sp. RS175 PFR28_01230 Lon protease strong 29 20
  Acidovorax sp. GW101-3H11 Ac3H11_937 ATP-dependent protease La (EC 3.4.21.53) Type I strong 34 13
  Alteromonas macleodii MIT1002 MIT1002_02757 Lon protease strong 34 13
  Ralstonia sp. UNC404CL21Col ABZR87_RS12785 endopeptidase La strong 29 27
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4044 ATP-dependent protease La (EC 3.4.21.53) Type I cofit 34 13
  Kangiella aquimarina DSM 16071 B158DRAFT_1038 ATP-dependent protease La cofit 27 24
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS06460 endopeptidase La no data 32 14
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS01340 endopeptidase La no data 29 27
  Ralstonia solanacearum UW163 UW163_RS14650 endopeptidase La no data 29 27
  Desulfovibrio vulgaris Hildenborough JW710 DVU1191 lon ATP-dependent protease La, putative (TIGR) strong 30 16
  Ralstonia solanacearum PSI07 RPSI07_RS16135 endopeptidase La no data 29 27