Homologs of GFF4630 from Variovorax sp. SCN45

O-antigen export system permease protein RfbD
KEGG: lipopolysaccharide transport system permease protein

80 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF4630 O-antigen export system permease protein RfbD no data 100 100
o Variovorax sp. OAS795 ABID97_RS05720 ABC transporter permease no data 85 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4626 O-antigen export system permease protein RfbD no data 37 96
o Erwinia tracheiphila SCR3 LU632_RS08880 ABC transporter permease cofit 37 88
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_19010 ABC transporter permease no data 35 97
o Azospirillum brasilense Sp245 AZOBR_RS33470 sugar ABC transporter permease strong 38 100
o Mycobacterium tuberculosis H37Rv Rv3783 Probable O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter RfbD no data 36 99
o Burkholderia phytofirmans PsJN BPHYT_RS33205 ABC transporter no data 32 96
o Dickeya dianthicola 67-19 HGI48_RS18600 ABC transporter permease strong 31 96
o Dickeya dadantii 3937 DDA3937_RS18670 ABC transporter permease strong 30 96
o Dickeya dianthicola ME23 DZA65_RS19735 ABC transporter permease strong 30 96
o Caulobacter crescentus NA1000 CCNA_00671 ABC-type polysaccharide/polyol phosphate export system, permease component no data 29 96
o Caulobacter crescentus NA1000 Δfur CCNA_00671 ABC-type polysaccharide/polyol phosphate export system, permease component cofit 29 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_01295 ABC transporter permease strong 25 87
o Phocaeicola dorei CL03T12C01 ABI39_RS13680 ABC transporter permease insig. 29 79
o Magnetospirillum magneticum AMB-1 AMB_RS05435 ABC transporter permease cofit 29 89
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS01115 ABC transporter permease no data 31 69
  Pseudomonas fluorescens FW300-N2E3 AO353_02005 hypothetical protein insig. 24 79
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_337 O-antigen export system permease protein RfbD strong 26 80
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1845 O-antigen export system, permease protein strong 26 88
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01800 ABC transporter permease cofit 23 98
o Rahnella sp. WP5 EX31_RS11480 ABC transporter permease cofit 26 83
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01668 hypothetical protein strong 28 71
  Pseudomonas putida KT2440 PP_1778 Lipopolysaccharide ABC export system, permease protein strong 24 75
  Burkholderia phytofirmans PsJN BPHYT_RS21440 sugar ABC transporter permease insig. 25 79
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS17700 ABC transporter permease strong 24 86
  Lysobacter sp. OAE881 ABIE51_RS04300 ABC transporter permease no data 26 77
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS18750 ABC transporter permease no data 25 86
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04827 lipopolysaccharide transport system permease protein no data 22 82
  Azospirillum brasilense Sp245 AZOBR_RS33925 ABC transporter strong 26 69
o Rhodanobacter denitrificans MT42 LRK55_RS05405 ABC transporter permease strong 24 83
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2592 ABC-type polysaccharide/polyol phosphate export systems, permease component insig. 24 78
  Magnetospirillum magneticum AMB-1 AMB_RS05475 hypothetical protein cofit 27 86
  Pseudomonas segetis P6 MPMX49_00390 Teichoic acid translocation permease protein TagG strong 25 69
  Desulfovibrio vulgaris Miyazaki F DvMF_2701 ABC-2 type transporter (RefSeq) no data 28 76
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4513.1 O-antigen export system permease protein RfbD no data 28 86
o Paraburkholderia graminis OAS925 ABIE53_001145 lipopolysaccharide transport system permease protein strong 27 84
o Synechocystis sp000284455 PCC 6803 SGL_RS03520 ABC transporter permease strong 26 85
  Pseudomonas sp. DMC3 GFF547 Teichoic acid translocation permease protein TagG cofit 28 63
  Pseudomonas syringae pv. syringae B728a Psyr_0610 ABC-2 insig. 23 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0610 ABC-2 insig. 23 78
  Paraburkholderia graminis OAS925 ABIE53_001154 lipopolysaccharide transport system permease protein strong 23 82
  Bosea sp. OAE506 ABIE41_RS03025 ABC transporter permease no data 28 69
o Bifidobacterium breve UCC2003 BBR_RS19765 ABC transporter permease no data 25 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2336 O-antigen export system permease protein RfbD sig. 27 70
  Pseudomonas fluorescens FW300-N2E3 AO353_10255 ABC transporter sig. 27 70
  Paraburkholderia sabiae LMG 24235 QEN71_RS25730 ABC transporter permease strong 21 82
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04281 Polysialic acid transport protein KpsM cofit 25 71
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05655 ABC transporter permease cofit 23 86
  Pseudomonas syringae pv. syringae B728a Psyr_0917 ABC-2 strong 25 66
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0917 ABC-2 strong 25 66
o Rhodanobacter sp. FW510-T8 OKGIIK_01190 Transport permease protein cofit 26 86
o Synechococcus elongatus PCC 7942 Synpcc7942_1126 ABC transporter permease protein strong 27 84
o Castellaniella sp019104865 MT123 ABCV34_RS12950 ABC transporter permease strong 26 91
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1963 O-antigen export system permease protein RfbD sig. 28 69
  Pseudomonas simiae WCS417 PS417_20640 sugar ABC transporter permease no data 28 75
  Synechocystis sp000284455 PCC 6803 SGL_RS18245 ABC transporter permease no data 23 81
  Desulfovibrio vulgaris Hildenborough JW710 DVUA0077 ABC transporter, permease protein (TIGR) no data 25 85
  Pseudomonas sp. SVBP6 COO64_RS06645 ABC transporter permease cofit 24 69
  Pseudomonas aeruginosa PA14 IKLFDK_26160 ABC transporter insig. 27 63
  Pseudomonas fluorescens FW300-N2C3 AO356_11825 ABC transporter strong 27 70
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4240 O-antigen export system permease protein RfbD insig. 27 70
  Klebsiella michiganensis M5al BWI76_RS18990 ABC transporter permease cofit 22 85
  Phocaeicola dorei CL03T12C01 ABI39_RS20530 ABC transporter permease insig. 25 96
  Pseudomonas fluorescens FW300-N2C3 AO356_00760 sugar ABC transporter permease insig. 24 72
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04375 ABC transporter permease no data 24 82
  Serratia liquefaciens MT49 IAI46_08125 ABC transporter permease no data 19 86
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_209 O-antigen export system permease protein RfbD insig. 22 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS06735 ABC transporter permease strong 25 86
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02307 hypothetical protein cofit 23 73
  Castellaniella sp019104865 MT123 ABCV34_RS10020 ABC transporter permease insig. 28 55
  Escherichia coli Nissle 1917 ECOLIN_RS17035 ABC transporter permease no data 23 86
  Pantoea sp. MT58 IAI47_07010 ABC transporter permease cofit 22 80
  Erwinia amylovora T8 OLJFJH_12105 ABC transporter permease strong 20 86
  Escherichia fergusonii Becca EFB2_00855 Polysialic acid transport protein KpsM insig. 23 86
  Synechocystis sp000284455 PCC 6803 SGL_RS09455 ABC transporter permease insig. 22 75
  Azospirillum sp. SherDot2 MPMX19_06721 hypothetical protein no data 24 79
  Pseudomonas sp. DMC3 GFF4663 Teichoic acid translocation permease protein TagG strong 23 78
  Escherichia coli ECOR38 HEPCGN_18100 kpsM Polysialic acid transport protein strong 23 73
  Escherichia coli BL21 ECD_02828 Polysialic acid transport protein kpsM cofit 23 86