Homologs of PS417_22640 from Pseudomonas simiae WCS417

cytochrome C biogenesis protein CcmE
SEED: C4-dicarboxylate transport sensor protein
KEGG: two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_22640 cytochrome C biogenesis protein CcmE strong 100 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04681 C4-dicarboxylate transport sensor protein DctB cofit 94 100
o Pseudomonas fluorescens SBW25 PFLU_RS24275 sensor histidine kinase insig. 96 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS24275 sensor histidine kinase strong 96 100
o Pseudomonas orientalis W4I3 QF045_RS24810 ATP-binding protein cofit 95 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5488 C4-dicarboxylate transport sensor protein strong 81 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1807 C4-dicarboxylate transport sensor protein strong 80 100
o Pseudomonas sp. DMC3 GFF5040 C4-dicarboxylate transport sensor protein DctB insig. 81 99
o Pseudomonas sp. RS175 PFR28_03461 C4-dicarboxylate transport sensor protein DctB strong 80 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_684 C4-dicarboxylate transport sensor protein strong 81 99
o Pseudomonas fluorescens FW300-N2E3 AO353_03800 cytochrome C biogenesis protein CcmE strong 82 100
o Pseudomonas fluorescens FW300-N2C3 AO356_17805 cytochrome C biogenesis protein CcmE strong 81 99
o Pseudomonas sp. SVBP6 COO64_RS26180 ATP-binding protein cofit 75 98
o Pseudomonas syringae pv. syringae B728a Psyr_3994 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal strong 71 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3994 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal insig. 71 98
o Pseudomonas putida KT2440 PP_1402 C4-dicarboxylate transport sensor protein strong 73 98
o Pseudomonas sp. BP01 JOY50_RS14535 ATP-binding protein insig. 72 98
o Pseudomonas aeruginosa PA14 IKLFDK_25850 two-component sensor histidine kinase sig. 66 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS58290 sensor histidine kinase strong 66 95
o Pseudomonas aeruginosa MRSN321 DY961_RS25860 sensor histidine kinase strong 66 95
o Pseudomonas stutzeri RCH2 Psest_4131 alpha-ketoglutarate sensor protein (mifS) (from data) strong 54 98
o Pseudomonas segetis P6 ACVTMO_RS01060 sensor histidine kinase insig. 52 98
o Magnetospirillum magneticum AMB-1 AMB_RS08385 sensor histidine kinase insig. 40 91
o Azospirillum sp. SherDot2 MPMX19_05979 C4-dicarboxylate transport sensor protein DctB insig. 44 91
  Dechlorosoma suillum PS Dsui_3485 signal transduction histidine kinase regulating C4-dicarboxylate transport system cofit 36 99
  Azospirillum sp. SherDot2 MPMX19_04252 C4-dicarboxylate transport sensor protein DctB insig. 42 95
o Azospirillum brasilense Sp245 AZOBR_RS21135 histidine kinase strong 42 91
  Xanthobacter sp. DMC5 GFF2902 C4-dicarboxylate transport sensor protein DctB insig. 38 92
  Dechlorosoma suillum PS Dsui_3465 signal transduction histidine kinase regulating C4-dicarboxylate transport system cofit 37 93
  Azospirillum sp. SherDot2 MPMX19_03596 C4-dicarboxylate transport sensor protein DctB insig. 37 91
  Ralstonia solanacearum GMI1000 RS_RS17235 sensor histidine kinase insig. 37 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23230 sensor histidine kinase insig. 36 90
  Ralstonia solanacearum UW163 UW163_RS16480 sensor histidine kinase insig. 36 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS16300 sensor histidine kinase sig. 36 90
  Ralstonia solanacearum PSI07 RPSI07_RS00040 sensor histidine kinase insig. 36 92
  Cupriavidus basilensis FW507-4G11 RR42_RS01700 ATPase insig. 36 90
  Herbaspirillum seropedicae SmR1 HSERO_RS16815 C4-dicarboxylate ABC transporter strong 34 96
  Dinoroseobacter shibae DFL-12 Dshi_1197 integral membrane sensor signal transduction histidine kinase (RefSeq) strong 37 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02038 two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB strong 34 96
  Cupriavidus basilensis FW507-4G11 RR42_RS03985 histidine kinase strong 36 96
  Cupriavidus basilensis FW507-4G11 RR42_RS26065 histidine kinase insig. 37 97
  Paraburkholderia graminis OAS925 ABIE53_001851 two-component system C4-dicarboxylate transport sensor histidine kinase DctB sig. 35 89
  Burkholderia phytofirmans PsJN BPHYT_RS02515 ATPase strong 34 96
  Vibrio cholerae E7946 ATCC 55056 CSW01_09630 sensor histidine kinase cofit 33 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4774 Signal transduction histidine kinase regulating C4-dicarboxylate transport system (EC 2.7.13.3) strong 33 99
  Paraburkholderia graminis OAS925 ABIE53_000647 two-component system C4-dicarboxylate transport sensor histidine kinase DctB strong 34 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS06630 sensor histidine kinase sig. 36 90
  Pseudomonas orientalis W4I3 QF045_RS08465 sensor histidine kinase cofit 33 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS10790 sensor histidine kinase insig. 36 90
  Ralstonia solanacearum UW163 UW163_RS02790 sensor histidine kinase insig. 36 90
  Ralstonia solanacearum PSI07 RPSI07_RS22525 sensor histidine kinase cofit 36 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS37770 ATP-binding protein insig. 35 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS01370 ATP-binding protein strong 33 91
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01295 C4-dicarboxylate transport sensor protein DctB cofit 32 99
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_775 Signal transduction histidine kinase regulating C4-dicarboxylate transport system (EC 2.7.13.3) sig. 32 99
  Xanthobacter sp. DMC5 GFF3676 C4-dicarboxylate transport sensor protein DctB strong 36 90
  Ralstonia solanacearum GMI1000 RS_RS01630 sensor histidine kinase strong 37 90
  Shewanella sp. ANA-3 Shewana3_1413 ATPase domain-containing protein (RefSeq) strong 31 98
  Pseudomonas fluorescens SBW25 PFLU_RS05625 sensor histidine kinase insig. 32 99
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05625 sensor histidine kinase strong 32 99
  Variovorax sp. OAS795 ABID97_RS26600 ATP-binding protein strong 35 92
  Pseudomonas simiae WCS417 PS417_05540 histidine kinase strong 32 99
  Acidovorax sp. GW101-3H11 Ac3H11_718 Sensor histidine kinase strong 47 63
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1032.1 Sensor histidine kinase insig. 46 61
  Variovorax sp. SCN45 GFF1692 Two-component system sensor histidine kinase insig. 35 92
  Pseudomonas sp. RS175 PFR28_04890 C4-dicarboxylate transport sensor protein DctB strong 35 93
  Pseudomonas sp. S08-1 OH686_13330 Signal transduction histidine kinase regulating C4-dicarboxylate transport system cofit 35 93
  Pseudomonas sp. DMC3 GFF5114 C4-dicarboxylate transport sensor protein DctB cofit 32 99
  Marinobacter adhaerens HP15 HP15_724 periplasmic sensor signal transduction histidine kinase strong 33 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5566 Signal transduction histidine kinase regulating C4-dicarboxylate transport system (EC 2.7.13.3) insig. 32 98
  Pseudomonas orientalis W4I3 QF045_RS04430 ATP-binding protein cofit 34 95
  Shewanella loihica PV-4 Shew_1443 integral membrane sensor signal transduction histidine kinase (RefSeq) strong 32 91
  Pseudomonas syringae pv. syringae B728a Psyr_3912 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal insig. 33 99
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3912 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal insig. 33 99
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08530 PAS-domain containing protein insig. 48 51
  Sinorhizobium meliloti 1021 SM_b20612 C4-dicarboxylate transport sensor protein strong 34 94
  Pseudomonas sp. BP01 JOY50_RS26415 ATP-binding protein insig. 34 94
  Pseudomonas fluorescens FW300-N2E3 AO353_16270 histidine kinase strong 32 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1665 Signal transduction histidine kinase regulating C4-dicarboxylate transport system insig. 34 93
  Pseudomonas fluorescens SBW25 PFLU_RS01405 sensor histidine kinase strong 34 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS01405 sensor histidine kinase strong 34 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3882 Signal transduction histidine kinase regulating C4-dicarboxylate transport system strong 34 93
  Agrobacterium fabrum C58 Atu0113 two component sensor kinase insig. 34 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00487 C4-dicarboxylate transport sensor protein DctB cofit 34 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_400 Signal transduction histidine kinase regulating C4-dicarboxylate transport system strong 34 93
  Pseudomonas simiae WCS417 PS417_01310 ATPase insig. 35 93
  Pseudomonas fluorescens FW300-N2E3 AO353_11865 ATPase sig. 34 93
  Rhodospirillum rubrum S1H Rru_A1436 Histidine Kinase (NCBI) strong 34 92
  Shewanella amazonensis SB2B Sama_2212 putative two-component sensor histidine kinase protein (RefSeq) strong 32 98
  Pseudomonas fluorescens FW300-N2C3 AO356_10060 ATPase cofit 34 93
  Pseudomonas sp. RS175 PFR28_03375 C4-dicarboxylate transport sensor protein DctB sig. 33 93
  Pseudomonas sp. DMC3 GFF4158 C4-dicarboxylate transport sensor protein DctB cofit 34 93
  Pseudomonas fluorescens FW300-N2C3 AO356_18210 histidine kinase insig. 31 99
  Pseudomonas sp. S08-1 OH686_14360 Signal transduction histidine kinase regulating C4-dicarboxylate transport system cofit 35 91
  Pseudomonas aeruginosa PA14 IKLFDK_27660 two-component system sensor histidine kinase DctB strong 34 93
  Pseudomonas aeruginosa PUPa3 DQ20_RS50425 dctB;inference=COORDINATES two-component system sensor histidine kinase DctB strong 34 93
  Pseudomonas aeruginosa MRSN321 DY961_RS11675 dctB;inference=COORDINATES two-component system sensor histidine kinase DctB strong 34 93
  Pseudomonas sp. SVBP6 COO64_RS00590 ATP-binding protein insig. 34 97
  Escherichia fergusonii Becca EFB2_04537 C4-dicarboxylate transport sensor protein DctB insig. 32 97
  Escherichia coli Nissle 1917 ECOLIN_RS23465 ATP-binding protein insig. 32 97