Homologs of GFF3473 from Variovorax sp. SCN45

no description

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF3473 no description insig. 100 100
o Pseudomonas sp. S08-1 OH686_14935 Transcriptional regulator, LysR family insig. 36 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS12505 LysR family transcriptional regulator insig. 41 92
o Variovorax sp. OAS795 ABID97_RS26100 LysR family transcriptional regulator no data 40 94
o Pseudomonas aeruginosa PUPa3 DQ20_RS44040 LysR family transcriptional regulator insig. 40 96
o Pseudomonas aeruginosa PA14 IKLFDK_03145 LysR family transcriptional regulator insig. 40 96
o Pseudomonas aeruginosa MRSN321 DY961_RS08810 LysR family transcriptional regulator insig. 40 96
o Cupriavidus basilensis FW507-4G11 RR42_RS11365 LysR family transcriptional regulator insig. 34 99
o Pseudomonas sp. DMC3 GFF966 HTH-type transcriptional regulator HdfR cofit 35 94
  Pseudomonas sp. DMC3 GFF4228 HTH-type transcriptional regulator BenM insig. 33 94
  Cupriavidus basilensis FW507-4G11 RR42_RS33430 LysR family transcriptional regulator insig. 37 93
o Marinobacter adhaerens HP15 HP15_4145 transcriptional regulator, LysR family insig. 33 94
o Pseudomonas fluorescens SBW25 PFLU_RS01035 LysR family transcriptional regulator insig. 34 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS01035 LysR family transcriptional regulator insig. 34 94
o Pseudomonas sp. SVBP6 COO64_RS12535 LysR family transcriptional regulator insig. 34 94
o Pseudomonas fluorescens FW300-N2C3 AO356_29525 transcriptional regulator insig. 34 94
o Pseudomonas orientalis W4I3 QF045_RS04085 LysR family transcriptional regulator cofit 34 97
  Variovorax sp. OAS795 ABID97_RS01210 LysR family transcriptional regulator no data 35 97
  Pseudomonas aeruginosa MRSN321 DY961_RS18065 LysR family transcriptional regulator no data 33 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS59300 LysR family transcriptional regulator insig. 33 94
  Pseudomonas sp. S08-1 OH686_16890 LysR family transcriptional regulator insig. 34 97
  Pseudomonas aeruginosa PA14 IKLFDK_24600 LysR family transcriptional regulator strong 32 97
  Pseudomonas aeruginosa MRSN321 DY961_RS27240 LysR family transcriptional regulator insig. 32 97
  Pseudomonas aeruginosa PUPa3 DQ20_RS31770 LysR family transcriptional regulator insig. 32 97
o Shewanella loihica PV-4 Shew_2959 LysR family transcriptional regulator (RefSeq) insig. 30 94
  Pseudomonas sp. SVBP6 COO64_RS12330 LysR family transcriptional regulator insig. 32 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2400 Chromosome initiation inhibitor no data 34 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_474 LysR family transcriptional regulator PA0191 insig. 36 65
  Pseudomonas sp. BP01 JOY50_RS14430 LysR family transcriptional regulator insig. 36 69
  Pseudomonas orientalis W4I3 QF045_RS04070 LysR family transcriptional regulator insig. 36 64
  Pseudomonas sp. BP01 JOY50_RS18530 LysR family transcriptional regulator insig. 31 95
  Pseudomonas fluorescens SBW25 PFLU_RS01020 LysR family transcriptional regulator insig. 35 64
  Pseudomonas fluorescens SBW25-INTG PFLU_RS01020 LysR family transcriptional regulator insig. 35 64
  Variovorax sp. SCN45 GFF7215 Transcriptional regulator, LysR family insig. 30 97
  Pseudomonas fluorescens FW300-N2C3 AO356_29540 transcriptional regulator insig. 35 64
  Pseudomonas sp. DMC3 GFF4231 hypothetical protein insig. 35 65
  Paraburkholderia graminis OAS925 ABIE53_006154 DNA-binding transcriptional LysR family regulator insig. 31 90
  Shewanella oneidensis MR-1 SO4542 transcriptional regulator, LysR family (NCBI ptt file) insig. 30 70
o Pectobacterium carotovorum WPP14 HER17_RS13950 LysR family transcriptional regulator insig. 32 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00420 hypothetical protein cofit 35 64
  Pectobacterium carotovorum WPP14 HER17_RS00730 LysR family transcriptional regulator insig. 29 93
o Dickeya dianthicola 67-19 HGI48_RS07710 LysR family transcriptional regulator insig. 30 93
  Dickeya dadantii 3937 DDA3937_RS07955 LysR family transcriptional regulator insig. 30 93
o Dickeya dianthicola ME23 DZA65_RS08305 LysR family transcriptional regulator insig. 30 93
  Dickeya dadantii 3937 DDA3937_RS08015 LysR family transcriptional regulator insig. 31 94
  Dickeya dianthicola 67-19 HGI48_RS07765 LysR family transcriptional regulator insig. 36 64
  Dickeya dianthicola ME23 DZA65_RS08360 LysR family transcriptional regulator insig. 35 65
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1048.1 Transcriptional regulator lysR family insig. 33 100
  Sphingobium sp. HT1-2 GFF2908 hypothetical protein insig. 29 98
  Escherichia coli BL21 ECD_01379 putative DNA-binding transcriptional regulator insig. 27 89
  Escherichia coli BW25113 b1422 ydcI putative transcriptional regulator LYSR-type (VIMSS) strong 27 89
  Klebsiella pneumoniae MKP103 KDGMDA_22600 LysR family transcriptional regulator sig. 35 57
  Cupriavidus basilensis FW507-4G11 RR42_RS34605 hypothetical protein insig. 31 64
  Escherichia coli BW25113 b1339 abgR predicted DNA-binding transcriptional regulator (NCBI) insig. 27 89
  Escherichia coli BL21 ECD_01316 putative DNA-binding transcriptional regulator of abgABT operon no data 27 89
  Escherichia coli ECRC100 OKFHMN_02200 abgR LysR family transcriptional regulator insig. 27 89
  Escherichia coli ECRC101 MCAODC_16055 abgR LysR family transcriptional regulator insig. 27 89
  Escherichia coli ECRC102 NIAGMN_26370 abgR LysR family transcriptional regulator cofit 27 89
  Escherichia coli ECRC98 JDDGAC_04760 abgR LysR family transcriptional regulator insig. 27 89
  Escherichia coli ECRC99 KEDOAH_26555 abgR LysR family transcriptional regulator no data 27 89
  Enterobacter asburiae PDN3 EX28DRAFT_1535 Transcriptional regulator insig. 29 64
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4462 LysR family transcriptional regulator YbhD insig. 32 63
  Escherichia fergusonii Becca EFB2_02558 HTH-type transcriptional regulator CatM insig. 27 89
  Escherichia coli Nissle 1917 ECOLIN_RS08220 LysR substrate-binding domain-containing protein insig. 27 89
  Escherichia coli ECRC62 BNILDI_17790 ydcI Uncharacterized HTH-type transcriptional regulator YdcI cofit 27 89
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02293 HTH-type transcriptional regulator CatM insig. 27 89
  Klebsiella michiganensis M5al BWI76_RS05855 LysR family transcriptional regulator insig. 31 66
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5613 Hydrogen peroxide-inducible genes activator insig. 29 64
  Pseudomonas sp. RS175 PFR28_00480 HTH-type transcriptional activator CmpR sig. 33 61
  Pseudomonas sp. S08-1 OH686_10420 hypothetical protein insig. 30 58
  Escherichia coli ECOR27 NOLOHH_19915 lysR LysR family transcriptional regulator insig. 27 89
  Escherichia coli ECRC62 BNILDI_18065 lysR LysR family transcriptional regulator insig. 27 89
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02343 HTH-type transcriptional regulator TsaR insig. 27 89
  Klebsiella michiganensis M5al BWI76_RS13280 LysR family transcriptional regulator strong 33 63
  Enterobacter sp. TBS_079 MPMX20_02040 HTH-type transcriptional regulator TsaR insig. 29 64
  Burkholderia phytofirmans PsJN BPHYT_RS28500 LysR family transcriptional regulator no data 31 61
  Pseudomonas fluorescens FW300-N2C3 AO356_05630 LysR family transcriptional regulator sig. 33 61
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2984 LysR family transcriptional regulator PA3398 strong 33 61
  Variovorax sp. OAS795 ABID97_RS06825 LysR family transcriptional regulator insig. 35 60
  Escherichia coli ECRC62 BNILDI_14075 lysR transcriptional regulator cofit 28 64
  Xanthobacter sp. DMC5 GFF3194 HTH-type transcriptional regulator ArgP insig. 27 80
  Pseudomonas fluorescens FW300-N2E3 AO353_15120 hypothetical protein insig. 31 62
  Escherichia coli ECOR27 NOLOHH_19335 ydcI Uncharacterized HTH-type transcriptional regulator YdcI sig. 27 89
  Pseudomonas syringae pv. syringae B728a Psyr_1386 transcriptional regulator, LysR family insig. 33 61
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1386 transcriptional regulator, LysR family insig. 33 61
  Klebsiella pneumoniae MKP103 KDGMDA_23225 LysR family transcriptional regulator insig. 32 63
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3152 LysR family transcriptional regulator PA3398 sig. 32 61
  Escherichia coli ECRC100 OKFHMN_01655 ydcI Uncharacterized HTH-type transcriptional regulator YdcI cofit 27 89
  Escherichia coli ECRC101 MCAODC_16280 ydcI Uncharacterized HTH-type transcriptional regulator YdcI insig. 27 89
  Escherichia coli ECRC102 NIAGMN_25790 ydcI Uncharacterized HTH-type transcriptional regulator YdcI insig. 27 89
  Escherichia coli ECRC98 JDDGAC_04145 ydcI Uncharacterized HTH-type transcriptional regulator YdcI insig. 27 89
  Escherichia coli ECRC99 KEDOAH_26785 ydcI Uncharacterized HTH-type transcriptional regulator YdcI no data 27 89
  Variovorax sp. SCN45 GFF5191 Galactose-binding protein regulator insig. 34 62
  Escherichia coli ECOR38 HEPCGN_26160 ydcI Uncharacterized HTH-type transcriptional regulator YdcI sig. 27 89
  Escherichia coli ECOR27 NOLOHH_01740 cynR transcriptional regulator CynR insig. 33 61
  Escherichia coli ECOR38 HEPCGN_07455 cynR transcriptional regulator CynR insig. 33 61
  Pseudomonas fluorescens FW300-N2E3 AO353_16845 LysR family transcriptional regulator sig. 32 61
  Pseudomonas sp. SVBP6 COO64_RS20875 LysR family transcriptional regulator insig. 36 47
  Desulfovibrio vulgaris Hildenborough JW710 DVU3313 transcriptional regulator, LysR family (TIGR) insig. 34 80
  Dickeya dadantii 3937 DDA3937_RS10670 LysR family transcriptional regulator insig. 33 58