Homologs of PS417_17380 from Pseudomonas simiae WCS417

membrane protein
SEED: TRAP-type C4-dicarboxylate transport system, large permease component

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_17380 membrane protein insig. 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS19305 TRAP transporter large permease insig. 98 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS19305 TRAP transporter large permease insig. 98 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03770 C4-dicarboxylate TRAP transporter large permease protein DctM no data 98 100
o Pseudomonas fluorescens FW300-N2C3 AO356_23045 hypothetical protein insig. 92 100
o Pseudomonas sp. DMC3 GFF1614 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 92 100
o Pseudomonas sp. BP01 JOY50_RS02045 TRAP transporter large permease insig. 91 100
o Pseudomonas putida KT2440 PP_1167 D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) strong 90 100
o Pseudomonas segetis P6 MPMX49_04072 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 86 100
o Pseudomonas syringae pv. syringae B728a Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 89 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0898 TRAP dicarboxylate transporter, DctM subunit insig. 89 100
o Pseudomonas sp. RS175 PFR28_02440 C4-dicarboxylate TRAP transporter large permease protein DctM strong 89 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_485 TRAP-type C4-dicarboxylate transport system, large permease component insig. 88 100
o Pseudomonas stutzeri RCH2 Psest_0361 TRAP transporter, DctM subunit insig. 85 100
o Rahnella sp. WP5 EX31_RS08020 TRAP transporter large permease insig. 76 99
o Enterobacter sp. TBS_079 MPMX20_04347 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 74 100
o Pectobacterium carotovorum WPP14 HER17_RS19685 TRAP transporter large permease cofit 74 99
o Acidovorax sp. GW101-3H11 Ac3H11_3955 TRAP-type C4-dicarboxylate transport system, large permease component insig. 76 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS16475 TRAP transporter large permease cofit 72 99
o Pantoea sp. MT58 IAI47_03220 TRAP transporter large permease insig. 72 99
o Xanthobacter sp. DMC5 GFF2559 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 49 98
o Bosea sp. OAE506 ABIE41_RS07820 TRAP transporter large permease insig. 49 99
o Agrobacterium fabrum C58 Atu3135 ABC transporter permease strong 49 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF795 TRAP-type C4-dicarboxylate transport system, large permease component insig. 44 100
o Caulobacter crescentus NA1000 CCNA_01515 C4-dicarboxylate transporter large subunit sig. 48 96
o Caulobacter crescentus NA1000 Δfur CCNA_01515 C4-dicarboxylate transporter large subunit cofit 48 96
o Sinorhizobium meliloti 1021 SM_b21351 C4-dicarboxylate large membrane transport protein insig. 47 100
o Cellulophaga baltica 18 M666_RS19730 TRAP transporter large permease subunit insig. 42 98
o Azospirillum brasilense Sp245 AZOBR_RS30120 C4-dicarboxylate ABC transporter permease insig. 44 100
o Klebsiella michiganensis M5al BWI76_RS24135 c4-dicarboxylate permease insig. 47 99
o Variovorax sp. OAS795 ABID97_RS10330 TRAP transporter large permease strong 43 95
o Escherichia coli ECOR27 NOLOHH_11090 dctQ Tripartite ATP-independent periplasmic transporter, DctM component insig. 46 99
o Azospirillum sp. SherDot2 MPMX19_05803 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 43 100
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.203.1 TRAP-type C4-dicarboxylate transport system, large permease component insig. 46 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2273 Predicted rhamnogalacturonide-specific TRAP-type transporter, large transmembrane component RhiC insig. 43 98
o Lysobacter sp. OAE881 ABIE51_RS02840 TRAP transporter large permease insig. 46 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03837 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 45 98
o Escherichia coli ECRC62 BNILDI_07135 TRAP transporter large permease cofit 45 98
o Alteromonas macleodii MIT1002 MIT1002_02428 Neu5Ac permease insig. 41 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3627 TRAP transporter, DctM subunit insig. 47 99
o Escherichia coli Nissle 1917 ECOLIN_RS17390 TRAP transporter large permease subunit insig. 45 98
  Desulfovibrio vulgaris Miyazaki F DvMF_1931 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 43 98
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3132 TRAP-type C4-dicarboxylate transport system, large permease component insig. 45 99
  Pseudomonas sp. RS175 PFR28_00121 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 42 96
  Pseudomonas sp. DMC3 GFF1144 C4-dicarboxylate TRAP transporter large permease protein DctM cofit 43 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU2823 dctM TRAP dicarboxylate transporter family protein (TIGR) insig. 42 98
  Pseudomonas stutzeri RCH2 Psest_4270 TRAP transporter, DctM subunit strong 41 99
  Pseudomonas aeruginosa PA14 IKLFDK_27640 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 42 96
o Dinoroseobacter shibae DFL-12 Dshi_0956 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 41 96
  Azospirillum brasilense Sp245 AZOBR_RS09595 C4-dicarboxylate ABC transporter permease sig. 36 99
  Rhodopseudomonas palustris CGA009 TX73_010560 TRAP transporter large permease subunit strong 36 99
o Variovorax sp. SCN45 GFF2920 TRAP-type C4-dicarboxylate transport system, large permease component insig. 40 96
  Pseudomonas segetis P6 MPMX49_03608 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 39 98
  Dechlorosoma suillum PS Dsui_3153 TRAP transporter, DctM subunit sig. 37 99
o Cupriavidus basilensis FW507-4G11 RR42_RS34990 ABC transporter permease insig. 37 99
  Dinoroseobacter shibae DFL-12 Dshi_2753 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 44 89
  Acidovorax sp. GW101-3H11 Ac3H11_163 TRAP-type C4-dicarboxylate transport system, large permease component insig. 38 95
  Variovorax sp. SCN45 GFF6470 TRAP-type C4-dicarboxylate transport system, large permease component insig. 38 99
  Azospirillum sp. SherDot2 MPMX19_00661 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 36 100
  Herbaspirillum seropedicae SmR1 HSERO_RS04250 C4-dicarboxylate ABC transporter permease sig. 38 100
  Pseudomonas segetis P6 MPMX49_04381 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 41 99
  Pseudomonas segetis P6 MPMX49_02417 C4-dicarboxylate TRAP transporter large permease protein DctM no data 41 99
  Azospirillum brasilense Sp245 AZOBR_RS27150 membrane protein insig. 40 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS21100 TRAP transporter large permease insig. 38 100
  Castellaniella sp019104865 MT123 ABCV34_RS05060 TRAP transporter large permease insig. 42 95
  Pseudomonas segetis P6 MPMX49_02444 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 41 95
  Sinorhizobium meliloti 1021 SM_b20444 hypothetical protein insig. 35 99
  Azospirillum brasilense Sp245 AZOBR_RS26625 dehydroascorbate transporter insig. 38 95
  Magnetospirillum magneticum AMB-1 AMB_RS04550 C4-dicarboxylate ABC transporter permease insig. 35 99
  Bosea sp. OAE506 ABIE41_RS18670 TRAP transporter large permease insig. 41 96
  Bosea sp. OAE506 ABIE41_RS16395 TRAP transporter large permease insig. 42 99
  Vibrio cholerae E7946 ATCC 55056 CSW01_09640 C4-dicarboxylate ABC transporter permease insig. 39 98
  Rhodospirillum rubrum S1H Rru_A3676 TRAP dicarboxylate transporter, DctM subunit (NCBI) strong 37 99
  Azospirillum sp. SherDot2 MPMX19_06063 C4-dicarboxylate TRAP transporter large permease protein DctM insig. 40 98
  Dinoroseobacter shibae DFL-12 Dshi_1832 TRAP dicarboxylate transporter, DctM subunit (RefSeq) sig. 38 96
o Fusobacterium nucleatum SB010 HUW76_03975 TRAP transporter large permease strong 38 100
  Xanthobacter sp. DMC5 GFF431 Sialic acid TRAP transporter large permease protein SiaM insig. 35 98
  Desulfovibrio vulgaris Miyazaki F DvMF_2137 TRAP dicarboxylate transporter, DctM subunit (RefSeq) cofit 39 99
  Castellaniella sp019104865 MT123 ABCV34_RS07855 TRAP transporter large permease insig. 38 98
  Castellaniella sp019104865 MT123 ABCV34_RS12260 TRAP transporter large permease insig. 39 96
  Bosea sp. OAE506 ABIE41_RS08865 TRAP transporter large permease insig. 40 98
o Rhizobium sp. OAE497 ABIE40_RS25810 TRAP transporter large permease insig. 37 88
  Bosea sp. OAE506 ABIE41_RS06675 TRAP transporter large permease insig. 36 97
  Acidovorax sp. GW101-3H11 Ac3H11_3520 TRAP-type C4-dicarboxylate transport system, large permease component insig. 39 98
  Sinorhizobium meliloti 1021 SM_b20297 permease insig. 37 99
  Pseudomonas fluorescens FW300-N2C3 AO356_25640 L-dehydroascorbate transporter large permease subunit insig. 40 94
  Acidovorax sp. GW101-3H11 Ac3H11_3227 gluconate TRAP transporter, large permease component (from data) strong 38 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2972 TRAP-type C4-dicarboxylate transport system, large permease component insig. 37 98
  Pseudomonas sp. RS175 PFR28_01613 Sialic acid TRAP transporter large permease protein SiaM insig. 40 93
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF174 TRAP-type C4-dicarboxylate transport system, large permease component no data 39 98
o Burkholderia phytofirmans PsJN BPHYT_RS24185 C4-dicarboxylate ABC transporter permease insig. 37 100
  Dinoroseobacter shibae DFL-12 Dshi_3328 TRAP dicarboxylate transporter, DctM subunit (RefSeq) insig. 40 97
  Variovorax sp. OAS795 ABID97_RS19635 TRAP transporter large permease insig. 39 95
  Bosea sp. OAE506 ABIE41_RS23665 TRAP transporter large permease insig. 37 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05326 TRAP transporter, DctM subunit insig. 37 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1302 TRAP-type C4-dicarboxylate transport system, large permease component insig. 39 94
o Escherichia fergusonii Becca EFB2_00228 Sialic acid TRAP transporter large permease protein SiaM insig. 39 98
  Escherichia coli Nissle 1917 ECOLIN_RS20465 2,3-diketo-L-gulonate TRAP transporter large permease YiaN insig. 39 98
  Agrobacterium fabrum C58 Atu2743 hypothetical protein insig. 38 100
o Paraburkholderia graminis OAS925 ABIE53_006500 tripartite ATP-independent transporter DctM subunit sig. 36 100