Homologs of PGA1_c29320 from Phaeobacter inhibens DSM 17395

putative endoribonuclease L-PSP
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_c29320 putative endoribonuclease L-PSP sig. 100 100
o Dinoroseobacter shibae DFL-12 Dshi_0137 Endoribonuclease L-PSP (RefSeq) strong 65 98
o Rhodospirillum rubrum S1H Rru_A2457 Endoribonuclease L-PSP (NCBI) no data 58 100
o Magnetospirillum magneticum AMB-1 AMB_RS13835 RidA family protein insig. 57 99
o Caulobacter crescentus NA1000 CCNA_02241 endoribonuclease L-PSP strong 58 98
o Caulobacter crescentus NA1000 Δfur CCNA_02241 endoribonuclease L-PSP insig. 58 98
o Rhizobium sp. OAE497 ABIE40_RS08890 RidA family protein insig. 54 99
o Bosea sp. OAE506 ABIE41_RS18195 RidA family protein insig. 53 99
o Xanthobacter sp. DMC5 GFF387 hypothetical protein sig. 56 99
o Agrobacterium fabrum C58 Atu1372 hypothetical protein strong 51 98
o Sinorhizobium meliloti 1021 SMc02103 hypothetical protein insig. 55 99
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08380 RidA family protein strong 53 99
o Azospirillum brasilense Sp245 AZOBR_RS05145 endoribonuclease sig. 56 99
o Sphingobium sp. HT1-2 GFF3346 RidA/YER057c/UK114 superfamily, group 1 cofit 57 99
o Rhodopseudomonas palustris CGA009 TX73_016220 RidA family protein sig. 53 99
o Ralstonia solanacearum GMI1000 RS_RS04880 RidA family protein no data 50 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2685 Putative translation initiation inhibitor, yjgF family strong 53 99
o Azospirillum sp. SherDot2 MPMX19_00535 hypothetical protein insig. 54 99
o Paraburkholderia graminis OAS925 ABIE53_001398 enamine deaminase RidA (YjgF/YER057c/UK114 family) strong 50 97
o Burkholderia phytofirmans PsJN BPHYT_RS05960 endoribonuclease L-PSP strong 50 96
o Herbaspirillum seropedicae SmR1 HSERO_RS09045 translation initiation inhibitor protein no data 45 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00270 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family strong 49 96
o Ralstonia solanacearum PSI07 RPSI07_RS19360 RidA family protein no data 49 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS24665 RidA family protein insig. 49 96
o Acidovorax sp. GW101-3H11 Ac3H11_268 Bona fide RidA/YjgF/TdcF/RutC subgroup sig. 47 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14100 RidA family protein no data 50 99
o Ralstonia solanacearum UW163 UW163_RS15710 RidA family protein insig. 50 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS09820 RidA family protein insig. 50 99
o Cupriavidus basilensis FW507-4G11 RR42_RS26810 endoribonuclease insig. 48 100
o Cellulophaga baltica 18 M666_RS04690 RidA family protein insig. 46 99
  Burkholderia phytofirmans PsJN BPHYT_RS10460 endoribonuclease no data 41 96
o Pseudomonas sp. SVBP6 COO64_RS23680 RidA family protein insig. 43 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_10595 NAD(P)H:quinone oxidoreductase, type IV insig. 38 98
o Mycobacterium tuberculosis H37Rv Rv3678c Conserved protein no data 45 99
  Bosea sp. OAE506 ABIE41_RS21995 RidA family protein insig. 43 99
  Cupriavidus basilensis FW507-4G11 RR42_RS14585 L-PSP family endoribonuclease sig. 45 99
  Agrobacterium fabrum C58 Atu3265 hypothetical protein insig. 47 94
o Pseudomonas sp. BP01 JOY50_RS05535 RidA family protein no data 44 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5556 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 45 96
  Burkholderia phytofirmans PsJN BPHYT_RS13395 endoribonuclease L-PSP insig. 39 99
o Variovorax sp. SCN45 GFF2690 RidA/YER057c/UK114 superfamily, group 1 no data 45 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2090 Putative translation initiation inhibitor, yjgF family insig. 39 100
o Variovorax sp. OAS795 ABID97_RS20010 RidA family protein no data 46 96
  Pseudomonas sp. BP01 JOY50_RS05210 RidA family protein no data 39 99
o Pseudomonas simiae WCS417 PS417_06660 endoribonuclease insig. 44 98
o Shewanella oneidensis MR-1 SO1960 conserved hypothetical protein (NCBI ptt file) insig. 39 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01472 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 37 99
  Rhizobium sp. OAE497 ABIE40_RS26075 RidA family protein insig. 47 94
o Pseudomonas fluorescens SBW25 PFLU_RS06690 RidA family protein insig. 43 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS06690 RidA family protein insig. 43 98
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3623 Endoribonuclease L-PSP insig. 44 98
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1690 Putative translation initiation inhibitor, yjgF family no data 37 98
  Variovorax sp. SCN45 GFF116 RidA/YER057c/UK114 superfamily, group 1 insig. 42 97
  Acidovorax sp. GW101-3H11 Ac3H11_3793 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 42 82
  Burkholderia phytofirmans PsJN BPHYT_RS35560 endoribonuclease L-PSP insig. 40 95
o Pseudomonas aeruginosa PA14 IKLFDK_03535 RidA family protein insig. 40 88
  Variovorax sp. SCN45 GFF3327 RidA/YER057c/UK114 superfamily, group 1 insig. 39 96
  Pseudomonas simiae WCS417 PS417_14845 endoribonuclease L-PSP insig. 40 94
o Pseudomonas fluorescens FW300-N2E3 AO353_14625 hypothetical protein insig. 34 91
  Pseudomonas fluorescens SBW25 PFLU_RS16860 RidA family protein insig. 42 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS16860 RidA family protein strong 42 82
  Variovorax sp. SCN45 GFF195 RidA/YER057c/UK114 superfamily, group 1 insig. 35 91
  Variovorax sp. OAS795 ABID97_RS02865 RidA family protein insig. 39 78
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4927 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein insig. 35 91
o Pseudomonas sp. DMC3 GFF4390 hypothetical protein insig. 32 91
  Variovorax sp. SCN45 GFF4151 RidA/YER057c/UK114 superfamily, group 1 insig. 35 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS08380 RidA family protein insig. 31 98
  Methylophilus sp. DMC18 GFF1301 2-iminobutanoate/2-iminopropanoate deaminase cofit 33 90
  Variovorax sp. OAS795 ABID97_RS01340 RidA family protein insig. 24 98
  Pseudomonas sp. S08-1 OH686_13545 RidA/YER057c/UK114 superfamily protein strong 31 91
  Marinobacter adhaerens HP15 HP15_306 YjgF-like protein strong 30 93
  Acinetobacter baumannii LAC-4 RR41_RS01650 RidA family protein sig. 29 93
  Ralstonia solanacearum PSI07 RPSI07_RS06815 RidA family protein insig. 35 89
  Pseudomonas stutzeri RCH2 Psest_3818 endoribonuclease L-PSP, putative strong 30 92
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 30 89
  Shewanella amazonensis SB2B Sama_0263 YjgF-like protein (RefSeq) strong 29 89
  Ralstonia solanacearum GMI1000 RS_RS24425 RidA family protein insig. 33 89
  Shewanella loihica PV-4 Shew_3500 putative endoribonuclease L-PSP (RefSeq) strong 29 89
  Pseudomonas sp. DMC3 GFF420 2-iminobutanoate/2-iminopropanoate deaminase strong 29 89
  Pseudomonas fluorescens FW300-N2C3 AO356_12475 reactive intermediate/imine deaminase strong 29 89
  Lysobacter sp. OAE881 ABIE51_RS17260 RidA family protein strong 31 90
  Pseudomonas fluorescens SBW25 PFLU_RS13590 RidA family protein insig. 31 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13590 RidA family protein insig. 31 90
  Pseudomonas sp. SVBP6 COO64_RS01560 RidA family protein strong 29 89
  Pseudomonas fluorescens GW456-L13 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 29 89
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup strong 29 89
  Pseudomonas fluorescens FW300-N2E3 AO353_09285 reactive intermediate/imine deaminase strong 29 89
  Pseudomonas sp. RS175 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase strong 28 89
  Pseudomonas putida KT2440 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase strong 29 89
  Pseudomonas sp. BP01 JOY50_RS08980 RidA family protein cofit 28 89
  Pseudomonas fluorescens SBW25 PFLU_RS29515 RidA family protein strong 27 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29515 RidA family protein strong 27 89
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00035 2-iminobutanoate/2-iminopropanoate deaminase strong 27 89
  Pseudomonas simiae WCS417 PS417_27835 endoribonuclease strong 27 89
  Acinetobacter radioresistens SK82 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase strong 27 93
  Kangiella aquimarina DSM 16071 B158DRAFT_0573 endoribonuclease L-PSP, putative sig. 28 90
  Cellulophaga baltica 18 M666_RS12150 RidA family protein insig. 28 90
  Pseudomonas aeruginosa PA14 IKLFDK_26760 reactive intermediate/imine deaminase insig. 27 90
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16635 RidA family protein insig. 32 87
  Ralstonia solanacearum UW163 UW163_RS17990 RidA family protein insig. 32 87