Homologs of GFF2135 from Xanthobacter sp. DMC5

putative RNA polymerase sigma factor FecI
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Xanthobacter sp. DMC5 GFF2135 putative RNA polymerase sigma factor FecI insig. 100 100
  Xanthobacter sp. DMC5 GFF2704 putative RNA polymerase sigma factor FecI insig. 35 95
o Pseudomonas aeruginosa MRSN321 DY961_RS15880 RNA polymerase sigma factor sig. 37 96
o Pseudomonas aeruginosa PA14 IKLFDK_17505 RNA polymerase subunit sigma-70 insig. 37 96
o Azospirillum brasilense Sp245 AZOBR_RS23325 RNA polymerase sigma70 insig. 36 95
o Pseudomonas aeruginosa PUPa3 DQ20_RS41200 RNA polymerase sigma factor insig. 36 96
  Rhodospirillum rubrum S1H Rru_A2397 Sigma-24 (FecI) (NCBI) insig. 34 90
  Azospirillum sp. SherDot2 MPMX19_03247 putative RNA polymerase sigma factor FecI insig. 32 93
o Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 34 95
o Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 38 93
  Herbaspirillum seropedicae SmR1 HSERO_RS11705 extracytoplasmic-function sigma-70 factor insig. 35 81
o Pseudomonas orientalis W4I3 QF045_RS12270 sigma-70 family RNA polymerase sigma factor insig. 37 93
  Sphingobium sp. HT1-2 GFF5333 sigma factor cofit 37 86
  Pseudomonas aeruginosa MRSN321 DY961_RS18835 RNA polymerase sigma factor sig. 37 89
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma no data 37 89
  Pseudomonas aeruginosa PUPa3 DQ20_RS52975 RNA polymerase sigma factor insig. 37 89
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 35 90
o Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 37 93
o Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 37 93
o Pseudomonas sp. BP01 JOY50_RS19220 RNA polymerase sigma factor insig. 34 96
o Pseudomonas putida KT2440 PP_0865 ECF subfamily RNA polymerase sigma-24 factor insig. 37 93
  Pseudomonas sp. SVBP6 COO64_RS02925 RNA polymerase sigma factor insig. 30 96
  Pseudomonas sp. BP01 JOY50_RS22705 RNA polymerase sigma factor insig. 39 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 36 93
  Rhodospirillum rubrum S1H Rru_A0883 Sigma-24 (FecI) (NCBI) insig. 37 80
  Pseudomonas sp. SVBP6 COO64_RS16360 RNA polymerase sigma factor sig. 34 90
  Pseudomonas sp. DMC3 GFF4554 hypothetical protein cofit 35 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2293 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 35 78
  Sphingobium sp. HT1-2 GFF2715 sigma factor insig. 36 73
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 35 91
  Pseudomonas sp. BP01 JOY50_RS26335 sigma-70 family RNA polymerase sigma factor insig. 35 93
o Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 32 90
o Sinorhizobium meliloti 1021 SMc04203 RNA polymerase sigma factor FECI protein insig. 32 95
  Pectobacterium carotovorum WPP14 HER17_RS14055 sigma-70 family RNA polymerase sigma factor insig. 31 95
  Pseudomonas sp. SVBP6 COO64_RS04025 sigma-70 family RNA polymerase sigma factor insig. 35 93
  Pseudomonas simiae WCS417 PS417_24420 RNA polymerase sigma70 no data 33 96
  Pseudomonas putida KT2440 PP_4244 alternative sigma factor sig. 35 79
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 34 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01536 hypothetical protein cofit 33 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_216 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 35 78
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2986 RNA polymerase sigma factor, sigma-70 family insig. 35 83
  Pseudomonas aeruginosa MRSN321 DY961_RS18585 pvdS;inference=COORDINATES pyoverdine signaling pathway sigma factor PvdS insig. 35 78
  Pseudomonas aeruginosa PA14 IKLFDK_11920 pyoverdine signaling pathway sigma factor PvdS sig. 35 78
  Pseudomonas aeruginosa PUPa3 DQ20_RS59800 pvdS;inference=COORDINATES pyoverdine signaling pathway sigma factor PvdS insig. 35 78
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 34 93
  Pseudomonas sp. BP01 JOY50_RS00025 RNA polymerase factor sigma-70 insig. 36 80
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2404 Sigma factor PvdS, controling pyoverdin biosynthesis sig. 35 78
o Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 34 95
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 34 95
  Pseudomonas sp. RS175 PFR28_01023 hypothetical protein sig. 35 78
  Pseudomonas fluorescens FW300-N2C3 AO356_02895 RNA polymerase subunit sigma-70 strong 35 78
  Pseudomonas fluorescens SBW25 PFLU_RS26350 RNA polymerase sigma factor insig. 32 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26350 RNA polymerase sigma factor sig. 32 96
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04111 hypothetical protein insig. 35 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 36 93
  Pseudomonas sp. SVBP6 COO64_RS12800 RNA polymerase sigma factor insig. 32 99
  Pseudomonas syringae pv. syringae B728a Psyr_1943 Sigma-70 region 2 strong 35 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1943 Sigma-70 region 2 sig. 35 78
  Pseudomonas sp. SVBP6 COO64_RS14455 sigma-70 family RNA polymerase sigma factor insig. 35 90
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 35 93
  Pseudomonas fluorescens SBW25 PFLU_RS21525 RNA polymerase factor sigma-70 insig. 35 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21525 RNA polymerase factor sigma-70 sig. 35 78
  Pseudomonas simiae WCS417 PS417_19555 RNA polymerase sigma70 strong 35 78
  Pseudomonas orientalis W4I3 QF045_RS21700 RNA polymerase factor sigma-70 no data 35 78
  Pseudomonas sp. DMC3 GFF1353 putative RNA polymerase sigma factor FecI cofit 35 93
o Pseudomonas segetis P6 ACVTMO_RS11095 sigma-70 family RNA polymerase sigma factor insig. 37 92
o Variovorax sp. OAS795 ABID97_RS21515 sigma-70 family RNA polymerase sigma factor no data 30 84
o Methylophilus sp. DMC18 GFF1078 hypothetical protein insig. 29 85
  Pseudomonas sp. SVBP6 COO64_RS18740 RNA polymerase factor sigma-70 cofit 34 78
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 34 93
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 34 93
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 33 89
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 33 95
  Variovorax sp. SCN45 GFF96 RNA polymerase ECF-type sigma factor insig. 30 93
  Variovorax sp. SCN45 GFF1645 Sigma factor PvdS, controling pyoverdin biosynthesis insig. 30 90
  Burkholderia phytofirmans PsJN BPHYT_RS20215 RNA polymerase sigma 70 sig. 33 83
  Pseudomonas fluorescens FW300-N2E3 AO353_19345 RNA polymerase subunit sigma-70 insig. 36 78
o Rahnella sp. WP5 EX31_RS16485 sigma-70 family RNA polymerase sigma factor insig. 35 90
  Pseudomonas aeruginosa MRSN321 DY961_RS18335 fpvI;inference=COORDINATES pyoverdine signaling pathway sigma factor FpvI insig. 34 92
  Pseudomonas aeruginosa PA14 IKLFDK_11700 pyoverdine signaling pathway sigma factor FpvI sig. 34 92
  Pseudomonas aeruginosa PUPa3 DQ20_RS59570 fpvI;inference=COORDINATES pyoverdine signaling pathway sigma factor FpvI insig. 34 92
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 32 93
  Paraburkholderia sabiae LMG 24235 QEN71_RS15840 RNA polymerase factor sigma-70 sig. 32 80
  Acinetobacter baumannii LAC-4 RR41_RS08490 sigma-70 family RNA polymerase sigma factor strong 32 82
  Klebsiella pneumoniae MKP103 KDGMDA_00205 RNA polymerase sigma factor FecI insig. 31 92
  Dechlorosoma suillum PS Dsui_2977 RNA polymerase sigma factor, sigma-70 family insig. 36 90
o Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 34 93
  Rhodopseudomonas palustris CGA009 TX73_016965 RNA polymerase sigma factor insig. 34 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3412 FIG006045: Sigma factor, ECF subfamily insig. 36 85
  Pseudomonas stutzeri RCH2 Psest_0650 RNA polymerase sigma factor, sigma-70 family insig. 31 89
  Herbaspirillum seropedicae SmR1 HSERO_RS12165 RNA polymerase sigma factor insig. 35 93
  Xanthobacter sp. DMC5 GFF2424 putative RNA polymerase sigma factor FecI insig. 31 93
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 33 96
  Pseudomonas orientalis W4I3 QF045_RS09635 RNA polymerase sigma factor insig. 31 90
  Pseudomonas fluorescens SBW25 PFLU_RS06940 sigma-70 family RNA polymerase sigma factor insig. 32 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06940 sigma-70 family RNA polymerase sigma factor sig. 32 87
  Klebsiella pneumoniae MKP103 KDGMDA_00600 RNA polymerase subunit sigma-70 insig. 33 92
  Pseudomonas fluorescens SBW25 PFLU_RS17395 sigma-70 family RNA polymerase sigma factor insig. 31 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17395 sigma-70 family RNA polymerase sigma factor strong 31 91
  Methylophilus sp. DMC18 GFF1839 hypothetical protein insig. 34 77