Homologs of GFF1632 from Variovorax sp. SCN45

RNA polymerase ECF-type sigma factor
SEED: RNA polymerase sigma-70 factor, ECF subfamily
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF1632 RNA polymerase ECF-type sigma factor insig. 100 100
o Variovorax sp. OAS795 ABID97_RS21425 sigma-70 family RNA polymerase sigma factor insig. 76 100
  Pseudomonas sp. SVBP6 COO64_RS16380 RNA polymerase sigma factor insig. 34 86
  Variovorax sp. SCN45 GFF2440 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 31 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1181 FIG006045: Sigma factor, ECF subfamily insig. 32 84
  Dechlorosoma suillum PS Dsui_2948 RNA polymerase sigma factor, sigma-70 family insig. 33 80
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 33 80
  Pseudomonas aeruginosa PUPa3 DQ20_RS41200 RNA polymerase sigma factor insig. 32 88
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 30 84
  Pseudomonas aeruginosa MRSN321 DY961_RS15880 RNA polymerase sigma factor sig. 33 82
  Pseudomonas aeruginosa PA14 IKLFDK_17505 RNA polymerase subunit sigma-70 insig. 33 82
  Pseudomonas sp. SVBP6 COO64_RS14455 sigma-70 family RNA polymerase sigma factor insig. 31 82
  Herbaspirillum seropedicae SmR1 HSERO_RS11705 extracytoplasmic-function sigma-70 factor insig. 31 89
  Pseudomonas sp. SVBP6 COO64_RS02925 RNA polymerase sigma factor insig. 33 82
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 32 83
  Pseudomonas sp. SVBP6 COO64_RS25100 sigma-70 family RNA polymerase sigma factor insig. 34 76
  Pseudomonas putida KT2440 PP_0667 RNA polymerase sigma-70 factor, ECF subfamily insig. 30 89
  Pseudomonas sp. BP01 JOY50_RS12755 sigma-70 family RNA polymerase sigma factor insig. 34 80
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 28 83
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 28 83
  Pseudomonas aeruginosa MRSN321 DY961_RS18835 RNA polymerase sigma factor sig. 29 83
  Pseudomonas aeruginosa PA14 IKLFDK_06170 RNA polymerase subunit sigma no data 29 83
  Pseudomonas aeruginosa PUPa3 DQ20_RS52975 RNA polymerase sigma factor insig. 29 83
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3357 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 89
  Pseudomonas sp. BP01 JOY50_RS26950 sigma-70 family RNA polymerase sigma factor insig. 31 80
  Methylophilus sp. DMC18 GFF1870 hypothetical protein insig. 29 80
  Pseudomonas fluorescens SBW25 PFLU_RS17395 sigma-70 family RNA polymerase sigma factor insig. 30 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17395 sigma-70 family RNA polymerase sigma factor strong 30 81
  Pseudomonas simiae WCS417 PS417_24420 RNA polymerase sigma70 no data 33 82
  Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 30 79
  Pseudomonas sp. BP01 JOY50_RS02475 sigma-70 family RNA polymerase sigma factor no data 33 84
  Pseudomonas fluorescens SBW25 PFLU_RS26350 RNA polymerase sigma factor insig. 33 82
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26350 RNA polymerase sigma factor sig. 33 82
  Pseudomonas sp. DMC3 GFF2767 putative RNA polymerase sigma factor FecI insig. 32 82
  Pectobacterium carotovorum WPP14 HER17_RS14055 sigma-70 family RNA polymerase sigma factor insig. 32 78
  Pseudomonas fluorescens SBW25 PFLU_RS06940 sigma-70 family RNA polymerase sigma factor insig. 35 53
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06940 sigma-70 family RNA polymerase sigma factor sig. 35 53
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 28 83
  Pseudomonas sp. SVBP6 COO64_RS16360 RNA polymerase sigma factor sig. 31 80
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 29 80
  Acinetobacter baumannii LAC-4 RR41_RS08490 sigma-70 family RNA polymerase sigma factor strong 24 80
  Pseudomonas sp. BP01 JOY50_RS26335 sigma-70 family RNA polymerase sigma factor insig. 31 83
  Pseudomonas orientalis W4I3 QF045_RS09635 RNA polymerase sigma factor insig. 34 53
  Pseudomonas sp. BP01 JOY50_RS22945 sigma-70 family RNA polymerase sigma factor insig. 30 82
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 29 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 29 80
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 33 68
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01536 hypothetical protein cofit 35 53
  Pseudomonas sp. BP01 JOY50_RS24800 sigma-70 family RNA polymerase sigma factor insig. 31 82
  Pseudomonas simiae WCS417 PS417_09655 RNA polymerase sigma factor insig. 31 82
  Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 31 63
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 29 80
  Pseudomonas segetis P6 ACVTMO_RS15980 sigma-70 family RNA polymerase sigma factor insig. 28 80
  Variovorax sp. SCN45 GFF1524 FIG006045: Sigma factor, ECF subfamily insig. 27 80
  Pseudomonas sp. SVBP6 COO64_RS19180 sigma-70 family RNA polymerase sigma factor insig. 33 83
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 33 53
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 31 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4581 RNA polymerase sigma-70 factor, ECF subfamily no data 31 89
  Pseudomonas sp. DMC3 GFF570 putative RNA polymerase sigma factor FecI cofit 29 83
  Klebsiella michiganensis M5al BWI76_RS11395 RNA polymerase sigma factor FecI strong 27 80
  Variovorax sp. SCN45 GFF4261 RNA polymerase ECF-type sigma factor insig. 29 84
  Sphingobium sp. HT1-2 GFF3691 RNA polymerase ECF-type sigma factor cofit 42 47
  Pseudomonas simiae WCS417 PS417_15890 RNA polymerase sigma factor sig. 33 56
  Pseudomonas fluorescens FW300-N2C3 AO356_05230 RNA polymerase subunit sigma-24 insig. 31 67
  Pseudomonas aeruginosa PA14 IKLFDK_10030 RNA polymerase subunit sigma insig. 29 82
  Methylophilus sp. DMC18 GFF1078 hypothetical protein insig. 28 79
  Pseudomonas aeruginosa MRSN321 DY961_RS16440 sigma-70 family RNA polymerase sigma factor insig. 29 82
  Klebsiella pneumoniae MKP103 KDGMDA_00205 RNA polymerase sigma factor FecI insig. 28 80
  Pseudomonas aeruginosa PUPa3 DQ20_RS38760 sigma-70 family RNA polymerase sigma factor insig. 29 82
  Pseudomonas sp. DMC3 GFF759 putative RNA polymerase sigma factor FecI insig. 36 51
  Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 31 78
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 29 84
  Pseudomonas fluorescens SBW25 PFLU_RS17705 sigma-70 family RNA polymerase sigma factor insig. 33 56
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17705 sigma-70 family RNA polymerase sigma factor sig. 33 56
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.715.1 RNA polymerase sigma factor insig. 28 80
  Pseudomonas simiae WCS417 PS417_05100 RNA polymerase sigma factor sig. 30 80
  Pseudomonas sp. DMC3 GFF1889 putative RNA polymerase sigma factor FecI cofit 30 80
  Pseudomonas sp. BP01 JOY50_RS01650 sigma-70 family RNA polymerase sigma factor insig. 29 78
  Pseudomonas aeruginosa MRSN321 DY961_RS13375 sigma-70 family RNA polymerase sigma factor insig. 31 83
  Pseudomonas aeruginosa PA14 IKLFDK_20100 RNA polymerase subunit sigma sig. 31 83
  Pseudomonas aeruginosa PUPa3 DQ20_RS48675 sigma-70 family RNA polymerase sigma factor insig. 31 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5307 FIG006045: Sigma factor, ECF subfamily strong 29 80
  Sphingobium sp. HT1-2 GFF4047 RNA polymerase ECF-type sigma factor cofit 34 61
  Pseudomonas fluorescens FW300-N2E3 AO353_19345 RNA polymerase subunit sigma-70 insig. 28 63
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 30 78
  Azospirillum brasilense Sp245 AZOBR_RS29160 putative RNA polymerase sigma-70 factor ECF subfamily insig. 26 84
  Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 32 78
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00175 putative RNA polymerase sigma factor FecI cofit 31 82
  Pseudomonas syringae pv. syringae B728a Psyr_1943 Sigma-70 region 2 strong 29 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1943 Sigma-70 region 2 sig. 29 63
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 27 80
  Pseudomonas putida KT2440 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein insig. 30 85
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02135 putative RNA polymerase sigma factor FecI cofit 29 82
  Pseudomonas orientalis W4I3 QF045_RS08085 sigma-70 family RNA polymerase sigma factor insig. 29 80
  Pseudomonas aeruginosa MRSN321 DY961_RS27025 RNA polymerase sigma factor insig. 34 54
  Pseudomonas aeruginosa PA14 IKLFDK_24795 RNA polymerase sigma factor insig. 34 54
  Pseudomonas aeruginosa PUPa3 DQ20_RS31565 RNA polymerase sigma factor sig. 34 54
  Pseudomonas orientalis W4I3 QF045_RS02910 sigma-70 family RNA polymerase sigma factor insig. 29 83
  Pseudomonas sp. BP01 JOY50_RS19840 sigma-70 family RNA polymerase sigma factor no data 28 80