Homologs of Psest_1627 from Pseudomonas stutzeri RCH2

Superfamily II DNA and RNA helicases
SEED: ATP-dependent RNA helicase SrmB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas stutzeri RCH2 Psest_1627 Superfamily II DNA and RNA helicases strong 100 100
o Pseudomonas sp. DMC3 GFF2355 ATP-dependent RNA helicase RhlE no data 78 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4451 ATP-dependent RNA helicase SrmB strong 77 100
o Pseudomonas sp. S08-1 OH686_05415 ATP-dependent RNA helicase SrmB cofit 79 100
o Pseudomonas sp. RS175 PFR28_00756 ATP-dependent RNA helicase RhlE insig. 78 100
o Pseudomonas simiae WCS417 PS417_20275 RNA helicase no data 77 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2675 ATP-dependent RNA helicase SrmB insig. 74 100
o Pseudomonas fluorescens FW300-N2C3 AO356_04210 RNA helicase no data 74 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_543 ATP-dependent RNA helicase SrmB no data 77 100
o Pseudomonas fluorescens FW300-N2E3 AO353_18305 RNA helicase sig. 77 100
o Pseudomonas fluorescens SBW25 PFLU_RS22195 DEAD/DEAH box helicase strong 76 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS22195 DEAD/DEAH box helicase strong 76 100
o Pseudomonas syringae pv. syringae B728a Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal sig. 75 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3791 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 75 100
o Pseudomonas sp. SVBP6 COO64_RS21930 DEAD/DEAH box helicase insig. 75 99
o Pseudomonas putida KT2440 PP_4532 ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis strong 74 100
o Pseudomonas sp. BP01 JOY50_RS01230 DEAD/DEAH box helicase insig. 74 100
o Pseudomonas aeruginosa PA14 IKLFDK_17790 RNA helicase insig. 72 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1312 Superfamily II DNA and RNA helicases insig. 45 98
  Herbaspirillum seropedicae SmR1 HSERO_RS17855 DEAD/DEAH box helicase sig. 41 99
o Shewanella oneidensis MR-1 SO2838 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) insig. 42 100
  Cupriavidus basilensis FW507-4G11 RR42_RS14810 DEAD/DEAH box helicase insig. 38 99
  Vibrio cholerae E7946 ATCC 55056 CSW01_18020 DEAD/DEAH box helicase cofit 44 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS15540 DEAD/DEAH box helicase sig. 45 82
o Shewanella sp. ANA-3 Shewana3_2606 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 43 86
  Ralstonia solanacearum PSI07 RPSI07_RS13580 ATP-dependent helicase sig. 44 82
  Paraburkholderia graminis OAS925 ABIE53_001438 ATP-dependent RNA helicase RhlE strong 46 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03650 ATP-dependent helicase insig. 44 82
  Ralstonia solanacearum UW163 UW163_RS10020 ATP-dependent helicase insig. 44 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS24485 DEAD/DEAH box helicase insig. 44 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00308 Superfamily II DNA and RNA helicase strong 45 83
  Ralstonia solanacearum GMI1000 RS_RS11095 ATP-dependent helicase sig. 44 82
  Acidovorax sp. GW101-3H11 Ac3H11_1125 ATP-dependent RNA helicase Bcep18194_A5658 no data 43 84
  Pseudomonas aeruginosa PA14 IKLFDK_20375 DEAD/DEAH box helicase insig. 44 83
o Shewanella amazonensis SB2B Sama_1273 DEAD/DEAH box helicase-like protein (RefSeq) no data 39 99
  Dechlorosoma suillum PS Dsui_3406 DNA/RNA helicase, superfamily II insig. 38 95
  Burkholderia phytofirmans PsJN BPHYT_RS06155 DEAD/DEAH box helicase strong 45 82
o Shewanella loihica PV-4 Shew_2452 DEAD/DEAH box helicase domain-containing protein (RefSeq) no data 42 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF222 ATP-dependent RNA helicase Bcep18194_A5658 insig. 42 83
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5046 ATP-dependent RNA helicase PA3950 strong 44 83
o Pantoea sp. MT58 IAI47_04835 ATP-dependent RNA helicase SrmB strong 40 95
  Pseudomonas fluorescens FW300-N2C3 AO356_15530 DEAD/DEAH box helicase sig. 44 83
  Cupriavidus basilensis FW507-4G11 RR42_RS14720 RNA helicase no data 42 84
  Ralstonia solanacearum GMI1000 RS_RS02695 RNA helicase sig. 39 95
  Pseudomonas fluorescens FW300-N2E3 AO353_06265 DEAD/DEAH box helicase strong 44 83
  Pseudomonas sp. RS175 PFR28_03825 ATP-dependent RNA helicase RhlE insig. 42 88
  Vibrio cholerae E7946 ATCC 55056 CSW01_14335 ATP-dependent helicase insig. 42 88
  Dechlorosoma suillum PS Dsui_3174 DNA/RNA helicase, superfamily II insig. 43 85
  Paraburkholderia graminis OAS925 ABIE53_003462 ATP-dependent RNA helicase RhlE sig. 41 84
  Klebsiella michiganensis M5al BWI76_RS08915 ATP-dependent RNA helicase RhlE sig. 44 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04222 ATP-dependent RNA helicase RhlE sig. 42 84
  Ralstonia sp. UNC404CL21Col ABZR87_RS07850 DEAD/DEAH box helicase sig. 41 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2736 ATP-dependent RNA helicase PA3950 sig. 44 83
  Methylophilus sp. DMC18 GFF1281 ATP-dependent RNA helicase RhlE cofit 42 84
o Erwinia amylovora T8 OLJFJH_10200 ATP-dependent RNA helicase SrmB strong 41 100
  Ralstonia solanacearum PSI07 RPSI07_RS21325 RNA helicase sig. 39 95
  Enterobacter sp. TBS_079 MPMX20_01425 ATP-dependent RNA helicase RhlE insig. 43 82
o Serratia liquefaciens MT49 IAI46_19600 ATP-dependent RNA helicase SrmB strong 42 94
  Burkholderia phytofirmans PsJN BPHYT_RS16445 RNA helicase strong 41 84
  Cupriavidus basilensis FW507-4G11 RR42_RS02870 RNA helicase sig. 41 84
  Pantoea sp. MT58 IAI47_13435 ATP-dependent RNA helicase RhlE insig. 42 84
  Castellaniella sp019104865 MT123 ABCV34_RS07925 DEAD/DEAH box helicase cofit 43 82
  Pseudomonas sp. BP01 JOY50_RS21825 DEAD/DEAH box helicase insig. 43 82
  Pseudomonas sp. S08-1 OH686_16620 ATP-dependent RNA helicase insig. 40 96
  Enterobacter asburiae PDN3 EX28DRAFT_2194 Superfamily II DNA and RNA helicases insig. 43 82
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11875 RNA helicase strong 41 84
  Ralstonia solanacearum UW163 UW163_RS01715 RNA helicase insig. 41 84
  Pseudomonas sp. DMC3 GFF3924 ATP-dependent RNA helicase RhlE cofit 43 83
  Azospirillum sp. SherDot2 MPMX19_02011 RNA helicase CrhR strong 40 95
  Pseudomonas simiae WCS417 PS417_24500 DEAD/DEAH box helicase strong 43 83
  Pseudomonas putida KT2440 PP_4766 ATP-dependent RNA helicase strong 42 83
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF696 ATP-dependent RNA helicase RhlE insig. 43 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS02265 DEAD/DEAH box helicase strong 41 84
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07310 DEAD/DEAH box helicase insig. 44 85
  Pseudomonas sp. SVBP6 COO64_RS15390 DEAD/DEAH box helicase insig. 43 81
  Pseudomonas syringae pv. syringae B728a Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal insig. 41 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal strong 41 88
  Pseudomonas fluorescens SBW25 PFLU_RS26425 DEAD/DEAH box helicase insig. 43 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26425 DEAD/DEAH box helicase sig. 43 83
  Castellaniella sp019104865 MT123 ABCV34_RS12515 DEAD/DEAH box helicase cofit 42 85
  Herbaspirillum seropedicae SmR1 HSERO_RS08565 RNA helicase insig. 39 84
  Rhodanobacter denitrificans MT42 LRK55_RS02395 DEAD/DEAH box helicase insig. 43 85
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02640 DEAD/DEAH box helicase sig. 43 85
  Vibrio cholerae E7946 ATCC 55056 CSW01_03475 ATP-dependent RNA helicase SrmB cofit 43 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1409 ATP-dependent RNA helicase PA3950 insig. 42 83
  Escherichia coli ECOR38 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE cofit 42 84
  Pseudomonas stutzeri RCH2 Psest_3505 Superfamily II DNA and RNA helicases strong 42 82
  Escherichia coli BL21 ECD_00764 ATP-dependent RNA helicase insig. 42 84
  Escherichia coli ECOR27 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE cofit 42 84
  Escherichia coli ECRC100 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE cofit 42 84
  Escherichia coli ECRC101 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE cofit 42 84
  Escherichia coli ECRC102 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE insig. 42 84
  Escherichia coli ECRC62 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE insig. 42 84
  Escherichia coli ECRC98 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE cofit 42 84
  Escherichia coli ECRC99 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE no data 42 84
  Escherichia coli Nissle 1917 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE insig. 42 84
  Escherichia coli BW25113 b0797 rhlE RNA helicase (NCBI) sig. 42 84
  Variovorax sp. OAS795 ABID97_RS22030 DEAD/DEAH box helicase strong 41 83
  Variovorax sp. SCN45 GFF1917 ATP-dependent RNA helicase Bcep18194_A5658 strong 41 83
  Escherichia fergusonii Becca EFB2_03308 ATP-dependent RNA helicase RhlE insig. 42 84