| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Xanthobacter sp. DMC5 | GFF1278 | | putative D,D-dipeptide transport system permease protein DdpC | insig. | 100 | 100 |
| o | Bosea sp. OAE506 | ABIE41_RS12200 | | ABC transporter permease | insig. | 78 | 94 |
| o | Rhodopseudomonas palustris CGA009 | TX73_007565 | | ABC transporter permease | insig. | 77 | 99 |
| | Bosea sp. OAE506 | ABIE41_RS09120 | | ABC transporter permease | insig. | 61 | 95 |
| | Xanthobacter sp. DMC5 | GFF1218 | | putative D,D-dipeptide transport system permease protein DdpC | insig. | 62 | 95 |
| | Variovorax sp. SCN45 | GFF7194 | | ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) | insig. | 60 | 81 |
| o | Rahnella sp. WP5 | EX31_RS00370 | | ABC transporter permease | insig. | 42 | 99 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS20880 | | ABC transporter permease subunit | insig. | 43 | 91 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS06060 | | ABC transporter permease | cofit | 43 | 94 |
| o | Dickeya dadantii 3937 | DDA3937_RS03510 | | ABC transporter permease | insig. | 45 | 89 |
| o | Pantoea sp. MT58 | IAI47_10090 | | ABC transporter permease | insig. | 42 | 94 |
| | Pectobacterium carotovorum WPP14 | HER17_RS01865 | | ABC transporter permease | cofit | 45 | 89 |
| o | Klebsiella michiganensis M5al | BWI76_RS19310 | | ABC transporter permease | sig. | 43 | 91 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004344 | | peptide/nickel transport system permease protein | insig. | 45 | 97 |
| o | Dickeya dianthicola 67-19 | HGI48_RS03610 | | ABC transporter permease | insig. | 44 | 89 |
| o | Dickeya dianthicola ME23 | DZA65_RS03730 | | ABC transporter permease | insig. | 44 | 89 |
| o | Serratia liquefaciens MT49 | IAI46_12035 | | D,D-dipeptide ABC transporter permease | insig. | 43 | 94 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_26355 | | D-ala-D-ala transporter subunit | insig. | 43 | 91 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS17275 | | ABC transporter permease subunit | insig. | 39 | 97 |
| | Rahnella sp. WP5 | EX31_RS10230 | | D,D-dipeptide ABC transporter permease | insig. | 42 | 92 |
| | Pantoea sp. MT58 | IAI47_11330 | | ABC transporter permease subunit | insig. | 41 | 90 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_06102 | | peptide/nickel transport system permease protein | insig. | 45 | 97 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS16850 | | glutathione ABC transporter permease GsiD | insig. | 46 | 88 |
| o | Enterobacter sp. TBS_079 | MPMX20_02358 | | putative D,D-dipeptide transport system permease protein DdpC | insig. | 43 | 91 |
| | Bosea sp. OAE506 | ABIE41_RS23530 | | nickel transporter permease | insig. | 45 | 89 |
| o | Escherichia coli ECRC101 | MCAODC_16610 | ddpC | D,D-dipeptide ABC transporter permease | insig. | 43 | 91 |
| o | Escherichia coli BW25113 | b1485 | ddpC | D-ala-D-ala transporter subunit (NCBI) | insig. | 43 | 91 |
| o | Escherichia coli BL21 | ECD_01443 | | D,D-dipeptide ABC transporter permease | insig. | 43 | 91 |
| o | Escherichia coli ECOR27 | NOLOHH_18970 | ddpC | D,D-dipeptide ABC transporter permease | insig. | 43 | 91 |
| o | Escherichia coli ECRC100 | OKFHMN_01330 | ddpC | D,D-dipeptide ABC transporter permease | cofit | 43 | 91 |
| o | Escherichia coli ECRC102 | NIAGMN_25460 | ddpC | D,D-dipeptide ABC transporter permease | insig. | 43 | 91 |
| o | Escherichia coli ECRC62 | BNILDI_17455 | ddpC | D,D-dipeptide ABC transporter permease | cofit | 43 | 91 |
| o | Escherichia coli ECRC98 | JDDGAC_03820 | ddpC | D,D-dipeptide ABC transporter permease | insig. | 43 | 91 |
| o | Escherichia coli ECRC99 | KEDOAH_27110 | ddpC | D,D-dipeptide ABC transporter permease | no data | 43 | 91 |
| o | Azospirillum sp. SherDot2 | MPMX19_00230 | | putative D,D-dipeptide transport system permease protein DdpC | insig. | 48 | 81 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS15585 | | ABC transporter permease | insig. | 44 | 97 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02232 | | putative D,D-dipeptide transport system permease protein DdpC | insig. | 43 | 91 |
| | Paraburkholderia graminis OAS925 | ABIE53_003269 | | glutathione transport system permease protein | insig. | 46 | 88 |
| o | Escherichia coli ECOR38 | HEPCGN_26465 | ddpC | D,D-dipeptide ABC transporter permease | insig. | 43 | 91 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_06860 | | D-ala-D-ala transporter subunit | insig. | 41 | 95 |
| o | Castellaniella sp019104865 MT123 | ABCV34_RS10990 | | ABC transporter permease | insig. | 44 | 84 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_1114 | | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | insig. | 43 | 91 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04046 | | glutathione transport system permease protein | insig. | 46 | 88 |
| o | Rhodospirillum rubrum S1H | Rru_A1919 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | insig. | 47 | 90 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_3231 | | Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) | insig. | 42 | 91 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS11980 | | glutathione ABC transporter permease | insig. | 47 | 82 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS11720 | | glutathione ABC transporter permease GsiD | insig. | 45 | 87 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS15525 | | glutathione ABC transporter permease GsiD | insig. | 45 | 87 |
| o | Agrobacterium fabrum C58 | Atu3458 | | ABC transporter permease | insig. | 44 | 83 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c28420 | | putative D,D-dipeptide transport system permease protein | sig. | 42 | 90 |
| o | Ralstonia solanacearum GMI1000 | RS_RS06930 | | glutathione ABC transporter permease GsiD | cofit | 45 | 87 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00255 | | glutathione ABC transporter permease GsiD | insig. | 45 | 87 |
| o | Ralstonia solanacearum UW163 | UW163_RS13585 | | glutathione ABC transporter permease GsiD | insig. | 45 | 87 |
| o | Rhizobium sp. OAE497 | ABIE40_RS23430 | | ABC transporter permease | insig. | 43 | 90 |
| | Agrobacterium fabrum C58 | Atu2516 | | ABC transporter, membrane spanning protein (dipeptide) | insig. | 40 | 91 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02397 | | putative D,D-dipeptide transport system permease protein DdpC | cofit | 41 | 94 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_15940 | | peptide ABC transporter permease | insig. | 44 | 84 |
| | Rahnella sp. WP5 | EX31_RS07240 | | ABC transporter permease | insig. | 39 | 91 |
| | Rahnella sp. WP5 | EX31_RS09245 | | ABC transporter permease subunit | insig. | 39 | 91 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS31240 | | cytochrome C550 | insig. | 44 | 98 |
| | Pseudomonas sp. BP01 | JOY50_RS03810 | | ABC transporter permease | insig. | 43 | 89 |
| | Azospirillum sp. SherDot2 | MPMX19_04007 | | Glutathione transport system permease protein GsiD | insig. | 45 | 83 |
| | Pantoea sp. MT58 | IAI47_04590 | | ABC transporter permease | insig. | 42 | 89 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS14585 | | ABC transporter permease | cofit | 42 | 89 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS31495 | | ABC transporter permease | insig. | 42 | 87 |
| | Rahnella sp. WP5 | EX31_RS09360 | | ABC transporter permease | insig. | 42 | 89 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS17225 | | glutathione ABC transporter permease GsiD | insig. | 44 | 82 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS11205 | | ABC transporter permease | insig. | 43 | 89 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11205 | | ABC transporter permease | insig. | 43 | 89 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01028 | | peptide/nickel transport system permease protein | insig. | 42 | 87 |
| | Paraburkholderia graminis OAS925 | ABIE53_006346 | | peptide/nickel transport system permease protein | sig. | 42 | 87 |
| o | Erwinia amylovora T8 | OLJFJH_18335 | | peptide ABC transporter permease | insig. | 41 | 87 |
| | Dickeya dadantii 3937 | DDA3937_RS20580 | | ABC transporter permease subunit | insig. | 40 | 91 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS09205 | | glutathione ABC transporter permease | insig. | 43 | 86 |
| o | Variovorax sp. OAS795 | ABID97_RS15395 | | glutathione ABC transporter permease GsiD | insig. | 43 | 90 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2397 | | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | cofit | 43 | 83 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02427 | | putative D,D-dipeptide transport system permease protein DdpC | cofit | 44 | 89 |
| | Dickeya dianthicola 67-19 | HGI48_RS00565 | | ABC transporter permease | insig. | 39 | 90 |
| o | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_20025 | gsiD | glutathione ABC transporter permease GsiD | cofit | 42 | 89 |
| o | Erwinia tracheiphila SCR3 | LU632_RS09570 | gsiD | glutathione ABC transporter permease GsiD | sig. | 42 | 89 |
| | Serratia liquefaciens MT49 | IAI46_15645 | | ABC transporter permease | insig. | 42 | 86 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS02620 | | D-ala-D-ala transporter subunit | insig. | 44 | 81 |
| o | Sinorhizobium meliloti 1021 | SMc01527 | | peptide ABC transporter permease | insig. | 42 | 91 |
| | Dickeya dianthicola 67-19 | HGI48_RS06900 | | ABC transporter permease | insig. | 42 | 85 |
| | Dickeya dianthicola ME23 | DZA65_RS07245 | | ABC transporter permease | insig. | 42 | 85 |
| | Variovorax sp. SCN45 | GFF1212 | | Oligopeptide transport permease protein OppC-like @ Glutathione ABC transporter, permease protein GsiD | insig. | 42 | 90 |
| | Pantoea sp. MT58 | IAI47_13115 | | glutathione ABC transporter permease GsiD | insig. | 41 | 91 |
| | Agrobacterium fabrum C58 | Atu4622 | | dipeptide ABC transporter permease | insig. | 40 | 97 |
| | Rhodospirillum rubrum S1H | Rru_A0801 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | insig. | 44 | 85 |
| o | Escherichia fergusonii Becca | EFB2_04508 | | putative D,D-dipeptide transport system permease protein DdpC | insig. | 42 | 83 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS23610 | | ABC transporter permease | insig. | 42 | 83 |
| | Variovorax sp. SCN45 | GFF4934 | | ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) | insig. | 43 | 88 |
| | Pectobacterium carotovorum WPP14 | HER17_RS13495 | | glutathione ABC transporter permease GsiD | insig. | 40 | 87 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02880 | | Glutathione transport system permease protein GsiD | insig. | 42 | 86 |
| | Dickeya dianthicola ME23 | DZA65_RS00600 | | ABC transporter permease | insig. | 39 | 90 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c16290 | | dipeptide transport system permease protein DppC | insig. | 44 | 82 |
| | Dickeya dadantii 3937 | DDA3937_RS16395 | | ABC transporter permease | insig. | 43 | 89 |
| | Escherichia fergusonii Becca | EFB2_03274 | | Glutathione transport system permease protein GsiD | insig. | 42 | 86 |
| | Escherichia coli ECOR27 | NOLOHH_22445 | gsiD | glutathione ABC transporter permease GsiD | insig. | 42 | 86 |
| | Escherichia coli ECOR38 | HEPCGN_01945 | gsiD | glutathione ABC transporter permease GsiD | insig. | 42 | 86 |