Homologs of GFF104 from Variovorax sp. SCN45

General secretion pathway protein D
SEED: General secretion pathway protein D
KEGG: general secretion pathway protein D

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF104 General secretion pathway protein D insig. 100 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_651 General secretion pathway protein D insig. 58 80
  Pseudomonas fluorescens FW300-N2C3 AO356_24790 type II secretion system protein GspD insig. 57 80
o Pseudomonas sp. RS175 PFR28_01750 Secretin XcpQ insig. 56 82
o Pseudomonas fluorescens SBW25 PFLU_RS11890 type II secretion system secretin GspD insig. 57 80
o Pseudomonas fluorescens SBW25-INTG PFLU_RS11890 type II secretion system secretin GspD insig. 57 80
  Pseudomonas fluorescens SBW25 PFLU_RS15750 type II secretion system secretin GspD insig. 57 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15750 type II secretion system secretin GspD insig. 57 78
  Pseudomonas simiae WCS417 PS417_11295 general secretion pathway protein GspD insig. 57 79
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1390 General secretion pathway protein D insig. 43 81
  Cupriavidus basilensis FW507-4G11 RR42_RS19520 general secretion pathway protein GspD strong 43 84
  Ralstonia sp. UNC404CL21Col ABZR87_RS03450 type II secretion system secretin GspD strong 42 83
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS07740 type II secretion system protein GspD strong 40 85
  Ralstonia solanacearum UW163 UW163_RS05885 type II secretion system protein GspD insig. 40 85
  Ralstonia solanacearum PSI07 RPSI07_RS09520 type II secretion system protein GspD cofit 42 83
  Variovorax sp. SCN45 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) cofit 40 81
  Acidovorax sp. GW101-3H11 Ac3H11_2030 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) strong 42 78
  Burkholderia phytofirmans PsJN BPHYT_RS19595 general secretion pathway protein GspD sig. 38 85
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02356 general secretion pathway protein D cofit 39 77
  Acinetobacter radioresistens SK82 MPMX26_00196 Secretin XcpQ cofit 31 76
  Variovorax sp. OAS795 ABID97_RS06950 type II secretion system secretin GspD insig. 42 48
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3945 type II secretion system protein D cofit 31 74
  Pseudomonas sp. S08-1 OH686_11840 type II secretion system protein D insig. 42 38
  Paraburkholderia graminis OAS925 ABIE53_000295 general secretion pathway protein D strong 40 36
  Erwinia tracheiphila SCR3 LU632_RS25230 gspD type II secretion system secretin GspD insig. 27 82
  Ralstonia solanacearum GMI1000 RS_RS15640 type II secretion system protein GspD strong 45 35
  Caulobacter crescentus NA1000 CCNA_00172 type II secretion pathway protein D cofit 42 34
  Caulobacter crescentus NA1000 Δfur CCNA_00172 type II secretion pathway protein D cofit 42 34
  Escherichia coli ECOR38 HEPCGN_18050 gspD general secretion pathway protein D strong 36 39
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00739 Type II secretion system protein D insig. 36 39
  Escherichia coli BL21 ECD_02838 putative type II secretion protein GspD strong 36 39
  Escherichia coli ECOR27 NOLOHH_10975 gspD general secretion pathway protein D cofit 36 39
  Escherichia coli Nissle 1917 ECOLIN_RS17085 type II secretion system secretin GspD insig. 36 39
  Escherichia fergusonii Becca EFB2_00845 Secretin GspD 2 insig. 36 39
  Dickeya dadantii 3937 DDA3937_RS12700 type II secretion system secretin GspD insig. 28 74
  Paraburkholderia sabiae LMG 24235 QEN71_RS29510 type II secretion system secretin GspD cofit 46 29
  Dickeya dianthicola ME23 DZA65_RS16270 type II secretion system secretin GspD insig. 28 74
  Alteromonas macleodii MIT1002 MIT1002_03976 Pullulanase secretion envelope PulD strong 35 42
  Enterobacter asburiae PDN3 EX28DRAFT_2079 type II secretion system protein D insig. 37 40
  Pseudomonas putida KT2440 PP_1046 Type II secretion pathway protein XcpQ insig. 40 35
  Pseudomonas fluorescens FW300-N2E3 AO353_12545 type II secretion system protein GspD insig. 38 40
  Shewanella oneidensis MR-1 SO0166 gspD general secretion pathway protein D (NCBI ptt file) strong 36 40
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.942.1 hypothetical protein insig. 38 35
  Shewanella amazonensis SB2B Sama_0169 type II and III secretion system protein (RefSeq) strong 36 40
  Kangiella aquimarina DSM 16071 B158DRAFT_0689 general secretion pathway protein D strong 35 38
  Pseudomonas fluorescens GW456-L13 PfGW456L13_266 General secretion pathway protein D insig. 39 38
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3746 General secretion pathway protein D insig. 40 35
  Dickeya dianthicola 67-19 HGI48_RS15450 type II secretion system secretin GspD insig. 27 74
  Shewanella sp. ANA-3 Shewana3_0151 general secretion pathway protein D (RefSeq) strong 36 38
  Rahnella sp. WP5 EX31_RS16165 type II secretion system secretin GspD insig. 36 40
  Pseudomonas fluorescens FW300-N2C3 AO356_09345 type II secretion system protein GspD insig. 39 35
  Marinobacter adhaerens HP15 HP15_2355 type II and III secretion system protein strong 37 35
  Enterobacter sp. TBS_079 MPMX20_01515 Putative secretin GspD insig. 37 37
  Pseudomonas stutzeri RCH2 Psest_2577 general secretion pathway protein D insig. 32 62
  Shewanella loihica PV-4 Shew_3619 general secretion pathway protein D (RefSeq) strong 37 38
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00378 Putative type II secretion system protein D insig. 36 38
  Vibrio cholerae E7946 ATCC 55056 CSW01_13790 type II secretion system protein GspD no data 35 42
  Pseudomonas sp. S08-1 OH686_04410 type II secretion system protein D cofit 39 35
  Escherichia coli BW25113 b3325 yheF putative general protein secretion protein (VIMSS) insig. 36 38
  Escherichia coli Nissle 1917 ECOLIN_RS19060 type II secretion system secretin GspD insig. 37 35
  Escherichia coli ECRC101 OKFHMN_00285 etpD variant type II secretion system secretin EtpD insig. 36 36
  Escherichia coli ECRC101 MCAODC_15265 etpD variant type II secretion system secretin EtpD insig. 36 36
  Escherichia coli ECRC102 NIAGMN_28605 etpD variant type II secretion system secretin EtpD insig. 36 36
  Escherichia coli ECRC98 JDDGAC_30295 etpD variant type II secretion system secretin EtpD no data 36 36
  Klebsiella michiganensis M5al BWI76_RS05090 type II secretion system protein GspD insig. 37 36
  Escherichia fergusonii Becca EFB2_00498 Putative secretin GspD insig. 37 35
  Pectobacterium carotovorum WPP14 HER17_RS06685 type II secretion system secretin GspD insig. 37 37
  Dickeya dianthicola 67-19 HGI48_RS14735 type II secretion system secretin GspD insig. 36 36
  Dickeya dianthicola ME23 DZA65_RS15680 type II secretion system secretin GspD cofit 36 36
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13065 type II secretion system secretin GspD strong 27 76
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10010 type II secretion system secretin GspD insig. 27 75
  Rhodanobacter sp. FW510-T8 OKGIIK_16265 Type II secretion system protein GspD cofit 27 75
  Pseudomonas fluorescens SBW25 PFLU_RS19890 type II secretion system secretin GspD insig. 26 76
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19890 type II secretion system secretin GspD insig. 26 76
  Pseudomonas simiae WCS417 PS417_18035 general secretion pathway protein GspD insig. 25 77
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4420.1 General secretion pathway protein D strong 27 78
  Acidovorax sp. GW101-3H11 Ac3H11_1893 General secretion pathway protein D no data 29 50
  Marinobacter adhaerens HP15 HP15_2355 type II and III secretion system protein strong 30 31
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11790 type IV pilus secretin PilQ cofit 33 33
  Pseudomonas stutzeri RCH2 Psest_2577 general secretion pathway protein D insig. 31 31
  Acinetobacter radioresistens SK82 MPMX26_02812 Type 3 secretion system secretin cofit 31 37
  Rhodanobacter denitrificans MT42 LRK55_RS09650 type II secretion system secretin GspD cofit 30 35
  Pseudomonas sp. S08-1 OH686_11840 type II secretion system protein D insig. 29 30
  Desulfovibrio vulgaris Miyazaki F DvMF_1027 type II and III secretion system protein (RefSeq) cofit 29 37
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1189.1 Type IV pilus biogenesis protein PilQ insig. 29 33
  Dickeya dianthicola 67-19 HGI48_RS19685 DNA uptake porin HofQ insig. 29 34
  Dickeya dianthicola ME23 DZA65_RS20770 DNA uptake porin HofQ insig. 29 34
  Erwinia tracheiphila SCR3 LU632_RS22875 hofQ DNA uptake porin HofQ insig. 29 33
  Pseudomonas sp. S08-1 OH686_04410 type II secretion system protein D cofit 26 32
  Pantoea sp. MT58 IAI47_01885 DNA uptake porin HofQ insig. 27 36
  Pseudomonas sp. S08-1 OH686_10025 Type IV pilus biogenesis protein PilQ cofit 26 33
  Rhodanobacter denitrificans MT42 LRK55_RS11580 type IV pilus secretin PilQ cofit 31 33
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11855 type IV pilus secretin PilQ strong 31 33
  Kangiella aquimarina DSM 16071 B158DRAFT_0689 general secretion pathway protein D strong 30 29
  Caulobacter crescentus NA1000 CCNA_00172 type II secretion pathway protein D cofit 29 32
  Caulobacter crescentus NA1000 Δfur CCNA_00172 type II secretion pathway protein D cofit 29 32
  Vibrio cholerae E7946 ATCC 55056 CSW01_13310 type IV pilus secretin PilQ insig. 29 36
  Alteromonas macleodii MIT1002 MIT1002_00449 Type IV pilus biogenesis and competence protein PilQ precursor insig. 30 33
  Pseudomonas stutzeri RCH2 Psest_3715 type IV pilus secretin (or competence protein) PilQ strong 28 34
  Desulfovibrio vulgaris Hildenborough JW710 DVU1273 bacterial type II/III secretion system protein (TIGR) strong 28 33