Homologs of EX28DRAFT_1223 from Enterobacter asburiae PDN3

Cupin domain/Helix-turn-helix
SEED: Transcriptional regulator yidN, Cro/CI family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Enterobacter asburiae PDN3 EX28DRAFT_1223 Cupin domain/Helix-turn-helix insig. 100 100
o Enterobacter sp. TBS_079 MPMX20_02243 HTH-type transcriptional regulator SutR insig. 89 100
o Klebsiella pneumoniae MKP103 KDGMDA_23150 XRE family transcriptional regulator insig. 74 100
o Klebsiella michiganensis M5al BWI76_RS13370 hypothetical protein insig. 74 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2595 Transcriptional regulator yidN, Cro/CI family insig. 72 99
o Escherichia coli ECRC100 OKFHMN_01605 sutR DNA-binding transcriptional regulator SutR insig. 68 99
o Escherichia coli ECRC101 MCAODC_16335 sutR DNA-binding transcriptional regulator SutR insig. 68 99
o Escherichia coli ECRC102 NIAGMN_25740 sutR DNA-binding transcriptional regulator SutR no data 68 99
o Escherichia coli ECRC98 JDDGAC_04095 sutR DNA-binding transcriptional regulator SutR insig. 68 99
o Escherichia coli ECRC99 KEDOAH_26835 sutR DNA-binding transcriptional regulator SutR no data 68 99
o Escherichia coli Nissle 1917 ECOLIN_RS08275 DNA-binding transcriptional regulator SutR no data 67 99
o Escherichia coli BL21 ECD_01392 putative DNA-binding transcriptional regulator no data 67 99
o Escherichia coli ECOR27 NOLOHH_19280 sutR DNA-binding transcriptional regulator SutR insig. 67 99
o Escherichia coli ECRC62 BNILDI_17730 sutR DNA-binding transcriptional regulator SutR insig. 67 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02281 HTH-type transcriptional regulator SutR insig. 67 99
o Escherichia coli BW25113 b1434 ydcN predicted DNA-binding transcriptional regulator (NCBI) insig. 67 99
o Escherichia fergusonii Becca EFB2_02548 HTH-type transcriptional regulator SutR insig. 66 99
o Escherichia coli ECOR38 HEPCGN_26215 sutR DNA-binding transcriptional regulator SutR insig. 66 99
o Serratia liquefaciens MT49 IAI46_11440 helix-turn-helix transcriptional regulator cofit 58 99
o Rahnella sp. WP5 EX31_RS05710 helix-turn-helix transcriptional regulator insig. 56 99
o Pectobacterium carotovorum WPP14 HER17_RS21700 XRE family transcriptional regulator cofit 55 99
o Erwinia amylovora T8 OLJFJH_15285 XRE family transcriptional regulator insig. 51 97
o Shewanella sp. ANA-3 Shewana3_0319 XRE family transcriptional regulator (RefSeq) strong 53 99
o Pantoea sp. MT58 IAI47_10265 helix-turn-helix domain-containing protein insig. 51 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS05870 helix-turn-helix domain-containing protein cofit 51 98
o Phaeobacter inhibens DSM 17395 PGA1_c29470 puttative helix-turn-helix protein insig. 46 97
o Alteromonas macleodii MIT1002 MIT1002_00748 DNA-binding transcriptional repressor PuuR insig. 43 98
o Vibrio cholerae E7946 ATCC 55056 CSW01_09830 XRE family transcriptional regulator insig. 43 97
  Rhodospirillum rubrum S1H Rru_A2614 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) insig. 34 98
  Rhodopseudomonas palustris CGA009 TX73_013495 XRE family transcriptional regulator insig. 38 86
o Methanococcus maripaludis S2 MMP_RS01155 XRE family transcriptional regulator strong 33 97
o Pseudomonas fluorescens FW300-N2C3 AO356_23675 hydroxyacid dehydrogenase insig. 35 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4417 Transcriptional regulator insig. 34 98
o Pseudomonas fluorescens SBW25 PFLU_RS18295 helix-turn-helix domain-containing protein insig. 34 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18295 helix-turn-helix domain-containing protein sig. 34 98
o Pseudomonas orientalis W4I3 QF045_RS17975 XRE family transcriptional regulator cofit 34 98
o Pseudomonas aeruginosa MRSN321 DY961_RS17955 XRE family transcriptional regulator insig. 33 98
o Pseudomonas aeruginosa PUPa3 DQ20_RS59195 XRE family transcriptional regulator sig. 33 98
o Pseudomonas aeruginosa PA14 IKLFDK_11340 hydroxyacid dehydrogenase no data 33 98
  Ralstonia sp. UNC404CL21Col ABZR87_RS22690 XRE family transcriptional regulator insig. 32 95
o Xanthobacter sp. DMC5 GFF1030 HTH-type transcriptional regulator SutR insig. 31 91
  Methanococcus maripaludis S2 MMP_RS00545 XRE family transcriptional regulator insig. 32 88
  Phaeobacter inhibens DSM 17395 PGA1_c34340 putative HTH-type transcriptional regulator sig. 30 89
  Ralstonia solanacearum GMI1000 RS_RS21755 XRE family transcriptional regulator sig. 31 94
o Methanococcus maripaludis JJ MMJJ_RS04940 XRE family transcriptional regulator insig. 31 88
o Azospirillum brasilense Sp245 AZOBR_RS25390 transcriptional regulator insig. 32 89
  Cupriavidus basilensis FW507-4G11 RR42_RS28290 DNA-binding protein strong 31 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03588 transcriptional regulator, XRE family with cupin sensor sig. 30 85
  Burkholderia phytofirmans PsJN BPHYT_RS34660 DNA-binding protein sig. 30 86
o Bosea sp. OAE506 ABIE41_RS13175 XRE family transcriptional regulator insig. 30 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS16530 XRE family transcriptional regulator insig. 29 86
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS19390 XRE family transcriptional regulator sig. 31 94
  Paraburkholderia graminis OAS925 ABIE53_004670 transcriptional regulator with XRE-family HTH domain sig. 29 86
  Burkholderia phytofirmans PsJN BPHYT_RS16515 2-hydroxyacid dehydrogenase insig. 30 89
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_00410 Cro/CI family transcriptional regulator cofit 51 46
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04234 transcriptional regulator, XRE family with cupin sensor insig. 30 89
  Alteromonas macleodii MIT1002 MIT1002_03074 HTH-type transcriptional regulator PuuR insig. 27 93
  Paraburkholderia graminis OAS925 ABIE53_003474 transcriptional regulator with XRE-family HTH domain insig. 29 89
  Rahnella sp. WP5 EX31_RS03010 helix-turn-helix domain-containing protein sig. 28 82
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08380 DNA-binding protein cofit 31 94
  Erwinia tracheiphila SCR3 LU632_RS22230 helix-turn-helix domain-containing protein cofit 31 94
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2607 transcriptional regulator, XRE family with cupin sensor sig. 28 87
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5820 Transcriptional regulator, Cro/CI family strong 32 93
  Azospirillum brasilense Sp245 AZOBR_RS20500 transcriptional regulator insig. 28 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2260 Transcriptional regulator insig. 25 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS02215 XRE family transcriptional regulator insig. 30 89
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_00405 hypothetical protein no data 53 33
  Pantoea sp. MT58 IAI47_21310 helix-turn-helix domain-containing protein sig. 28 87
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07260 helix-turn-helix transcriptional regulator strong 28 87
  Sinorhizobium meliloti 1021 SMc00351 hypothetical protein insig. 27 94
  Rahnella sp. WP5 EX31_RS21645 XRE family transcriptional regulator insig. 30 95
  Azospirillum sp. SherDot2 MPMX19_02581 HTH-type transcriptional regulator SutR insig. 27 95
  Acinetobacter baumannii LAC-4 RR41_RS01095 XRE family transcriptional regulator insig. 26 87
  Klebsiella pneumoniae MKP103 KDGMDA_09135 transcriptional regulator insig. 24 87
  Dickeya dianthicola 67-19 HGI48_RS18970 helix-turn-helix transcriptional regulator cofit 31 88
  Dickeya dianthicola ME23 DZA65_RS20080 helix-turn-helix transcriptional regulator insig. 31 88
  Variovorax sp. OAS795 ABID97_RS06760 XRE family transcriptional regulator insig. 31 95
  Pseudomonas fluorescens FW300-N2E3 AO353_21480 Cro/Cl family transcriptional regulator strong 31 93
  Pseudomonas sp. RS175 PFR28_02400 hypothetical protein sig. 31 93
  Enterobacter sp. TBS_079 MPMX20_04570 HTH-type transcriptional regulator SutR strong 24 87
  Pseudomonas fluorescens SBW25 PFLU_RS18830 helix-turn-helix domain-containing protein insig. 30 93
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18830 helix-turn-helix domain-containing protein strong 30 93
  Variovorax sp. SCN45 GFF5178 Transcriptional regulator, Xre-family with cupin domain insig. 32 95
  Pseudomonas fluorescens FW300-N2C3 AO356_23290 Cro/Cl family transcriptional regulator sig. 31 93
  Acinetobacter baumannii LAC-4 RR41_RS11820 XRE family transcriptional regulator insig. 27 95
  Serratia liquefaciens MT49 IAI46_12755 helix-turn-helix transcriptional regulator no data 26 86
  Klebsiella michiganensis M5al BWI76_RS00575 DNA-binding protein strong 24 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_541 Transcriptional regulator, Cro/CI family insig. 31 88
  Azospirillum sp. SherDot2 MPMX19_02874 HTH-type transcriptional regulator SutR insig. 27 95
  Enterobacter asburiae PDN3 EX28DRAFT_4383 transcriptional regulator, XRE family with cupin sensor strong 24 87
  Acidovorax sp. GW101-3H11 Ac3H11_1308 Transcriptional regulator no data 50 38
  Pectobacterium carotovorum WPP14 HER17_RS03720 XRE family transcriptional regulator insig. 26 87
  Dickeya dadantii 3937 DDA3937_RS01955 helix-turn-helix domain-containing protein insig. 30 97
  Rhodospirillum rubrum S1H Rru_A2042 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) insig. 27 89
  Variovorax sp. SCN45 GFF1021 Transcriptional regulator, Xre-family with cupin domain insig. 47 40
  Serratia liquefaciens MT49 IAI46_09015 helix-turn-helix transcriptional regulator no data 29 93
  Acinetobacter radioresistens SK82 MPMX26_01241 HTH-type transcriptional regulator SutR strong 24 86
  Pseudomonas sp. SVBP6 COO64_RS07815 helix-turn-helix domain-containing protein insig. 25 87
  Pseudomonas aeruginosa MRSN321 DY961_RS19145 XRE family transcriptional regulator strong 32 93
  Pseudomonas sp. BP01 JOY50_RS12560 helix-turn-helix domain-containing protein insig. 29 93