Homologs of CA264_14980 from Pontibacter actiniarum KMM 6156, DSM 19842

ribonuclease E/G
SEED: Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-)
KEGG: ribonuclease G

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_14980 ribonuclease E/G no data 100 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1251 ribonuclease, Rne/Rng family no data 64 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS22665 ribonuclease E/G no data 56 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS20445 Rne/Rng family ribonuclease no data 55 97
o Phocaeicola dorei CL03T12C01 ABI39_RS21120 Rne/Rng family ribonuclease no data 52 97
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS07245 Rne/Rng family ribonuclease strong 52 97
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS14165 Rne/Rng family ribonuclease sig. 52 97
o Bacteroides ovatus ATCC 8483 BACOVA_04231 S1 RNA binding domain protein no data 51 97
o Bacteroides stercoris CC31F HMPREF1181_RS04785 Rne/Rng family ribonuclease no data 52 97
o Bacteroides thetaiotaomicron VPI-5482 BT1500 Ribonuclease G (NCBI ptt file) no data 51 97
o Dechlorosoma suillum PS Dsui_0434 ribonuclease, Rne/Rng family strong 36 83
o Paraburkholderia sabiae LMG 24235 QEN71_RS24430 ribonuclease G strong 35 83
o Paraburkholderia graminis OAS925 ABIE53_001538 ribonuclease G strong 35 82
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04515 RNAse G sig. 35 82
o Burkholderia phytofirmans PsJN BPHYT_RS06375 ribonuclease strong 35 82
o Kangiella aquimarina DSM 16071 B158DRAFT_2069 ribonuclease, Rne/Rng family strong 36 83
o Dickeya dadantii 3937 DDA3937_RS01450 ribonuclease G strong 35 88
o Dickeya dianthicola 67-19 HGI48_RS01370 ribonuclease G cofit 35 88
o Dickeya dianthicola ME23 DZA65_RS01430 ribonuclease G sig. 35 88
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2614.1 Ribonuclease E (EC 3.1.26.12) insig. 35 81
o Escherichia coli BL21 ECD_03106 ribonuclease G strong 34 88
o Escherichia fergusonii Becca EFB2_00584 Ribonuclease G insig. 34 88
o Escherichia coli ECOR27 NOLOHH_09530 rng ribonuclease G strong 34 88
o Escherichia coli ECOR38 HEPCGN_16610 rng ribonuclease G cofit 34 88
o Escherichia coli ECRC100 OKFHMN_17745 rng ribonuclease G cofit 34 88
o Escherichia coli ECRC101 MCAODC_08265 rng ribonuclease G cofit 34 88
o Escherichia coli ECRC102 NIAGMN_15505 rng ribonuclease G insig. 34 88
o Escherichia coli ECRC62 BNILDI_01990 rng ribonuclease G insig. 34 88
o Escherichia coli ECRC98 JDDGAC_21370 rng ribonuclease G cofit 34 88
o Escherichia coli ECRC99 KEDOAH_10405 rng ribonuclease G no data 34 88
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00458 Ribonuclease G cofit 34 88
o Escherichia coli Nissle 1917 ECOLIN_RS18605 ribonuclease G strong 34 88
o Escherichia coli BW25113 b3247 cafA bundles of cytoplasmic filaments (VIMSS) strong 34 88
o Rahnella sp. WP5 EX31_RS12255 ribonuclease G insig. 36 83
  Kangiella aquimarina DSM 16071 B158DRAFT_1771 ribonuclease, Rne/Rng family strong 35 81
o Shewanella amazonensis SB2B Sama_0471 ribonuclease G (RefSeq) strong 34 88
  Lysobacter sp. OAE881 ABIE51_RS11805 ribonuclease E strong 34 81
o Enterobacter sp. TBS_079 MPMX20_04153 Ribonuclease G strong 34 88
o Pectobacterium carotovorum WPP14 HER17_RS20150 ribonuclease G sig. 34 88
o Herbaspirillum seropedicae SmR1 HSERO_RS17790 ribonuclease no data 34 83
  Acinetobacter radioresistens SK82 MPMX26_00315 Ribonuclease E strong 35 81
o Enterobacter asburiae PDN3 EX28DRAFT_3297 ribonuclease, Rne/Rng family strong 33 88
o Klebsiella michiganensis M5al BWI76_RS25480 ribonuclease E/G strong 33 88
o Shewanella oneidensis MR-1 SO4094 cafA ribonuclease G (NCBI ptt file) strong 33 88
o Vibrio cholerae E7946 ATCC 55056 CSW01_02205 ribonuclease E/G cofit 33 88
  Synechococcus elongatus PCC 7942 Synpcc7942_0878 rne ribonuclease, Rne/Rng family strong 37 79
o Rhodanobacter sp. FW510-T8 OKGIIK_10290 rng ribonuclease G insig. 33 88
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1880.1 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) strong 35 83
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) strong 34 88
  Pseudomonas fluorescens SBW25 PFLU_RS23100 ribonuclease E cofit 35 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS23100 ribonuclease E strong 35 81
  Alteromonas macleodii MIT1002 MIT1002_01724 Ribonuclease E cofit 35 81
  Pseudomonas simiae WCS417 PS417_21485 ribonuclease E no data 35 81
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2095 Ribonuclease E (EC 3.1.26.12) strong 34 81
o Erwinia tracheiphila SCR3 LU632_RS21430 rng ribonuclease G sig. 34 88
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_461 Ribonuclease E (EC 3.1.26.12) no data 34 81
  Vibrio cholerae E7946 ATCC 55056 CSW01_10145 ribonuclease E insig. 34 81
o Shewanella sp. ANA-3 Shewana3_3644 ribonuclease G (RefSeq) strong 33 88
  Pseudomonas syringae pv. syringae B728a Psyr_1638 RNAse E sig. 35 81
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1638 RNAse E insig. 35 81
  Pseudomonas fluorescens FW300-N2E3 AO353_01410 ribonuclease E strong 34 81
  Shewanella amazonensis SB2B Sama_1989 ribonuclease E (RefSeq) no data 33 81
  Pseudomonas sp. RS175 PFR28_03019 Ribonuclease E no data 34 81
  Pseudomonas fluorescens FW300-N2C3 AO356_20120 ribonuclease E no data 34 81
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5942 Ribonuclease E (EC 3.1.26.12) no data 34 81
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04339 RNAse E (EC 3.1.26.12) no data 33 81
  Pseudomonas stutzeri RCH2 Psest_1679 ribonuclease, Rne/Rng family strong 34 81
  Alteromonas macleodii MIT1002 MIT1002_00224 Ribonuclease G strong 33 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS04495 Rne/Rng family ribonuclease insig. 33 81
  Paraburkholderia graminis OAS925 ABIE53_003059 ribonuclease E strong 33 81
  Lysobacter sp. OAE881 ABIE51_RS06785 ribonuclease G strong 35 83
  Bifidobacterium breve UCC2003 BBR_RS19465 ribonuclease E/G strong 34 79
  Burkholderia phytofirmans PsJN BPHYT_RS14485 ribonuclease E strong 32 81
  Variovorax sp. OAS795 ABID97_RS08245 Rne/Rng family ribonuclease strong 34 81
  Variovorax sp. SCN45 GFF3845 Ribonuclease E (EC 3.1.26.12) cofit 34 81
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04085 ribonuclease E/G insig. 34 82
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF120 Ribonuclease E (EC 3.1.26.12) cofit 34 81
  Acinetobacter radioresistens SK82 MPMX26_00646 Ribonuclease G strong 35 83
  Pseudomonas putida KT2440 PP_1905 ribonuclease E no data 34 81
  Shewanella loihica PV-4 Shew_1593 ribonuclease (RefSeq) insig. 34 81
  Escherichia fergusonii Becca EFB2_02890 Ribonuclease E insig. 34 81
  Escherichia coli ECOR27 NOLOHH_21150 rne ribonuclease E cofit 34 81
  Escherichia coli ECRC62 BNILDI_19310 rne ribonuclease E strong 34 81
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02581 Ribonuclease E insig. 34 81
  Escherichia coli Nissle 1917 ECOLIN_RS06270 ribonuclease E strong 34 81
  Escherichia coli BW25113 b1084 rne fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) strong 34 81
  Acidovorax sp. GW101-3H11 Ac3H11_1592 Ribonuclease E (EC 3.1.26.12) no data 34 81
o Serratia liquefaciens MT49 IAI46_22700 ribonuclease G cofit 36 83
  Escherichia coli BL21 ECD_01080 endoribonuclease; RNA-binding protein strong 34 81
  Escherichia coli ECOR38 HEPCGN_23860 rne ribonuclease E strong 34 81
  Escherichia coli ECRC101 MCAODC_22980 rne ribonuclease E cofit 34 81
  Escherichia coli ECRC102 NIAGMN_24210 rne ribonuclease E insig. 34 81
  Escherichia coli ECRC98 JDDGAC_07280 rne ribonuclease E insig. 34 81
  Escherichia coli ECRC99 KEDOAH_24135 rne ribonuclease E no data 34 81
  Shewanella loihica PV-4 Shew_0407 ribonuclease G (RefSeq) strong 33 89
  Pseudomonas sp. S08-1 OH686_22085 Ribonuclease E cofit 34 81
  Escherichia coli ECRC100 OKFHMN_03620 rne ribonuclease E cofit 34 81
  Erwinia tracheiphila SCR3 LU632_RS14860 rne ribonuclease E insig. 33 81
  Variovorax sp. SCN45 GFF295 Ribonuclease G cofit 33 81
  Ralstonia sp. UNC404CL21Col ABZR87_RS10085 Rne/Rng family ribonuclease strong 33 81