Homologs of Atu3202 from Agrobacterium fabrum C58

RND multidrug efflux transporter
SEED: RND efflux system, inner membrane transporter CmeB
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu3202 RND multidrug efflux transporter strong 100 100
o Sinorhizobium meliloti 1021 SMc02867 multidrug-efflux system transmembrane protein strong 72 100
o Rhodospirillum rubrum S1H Rru_A1118 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) insig. 69 99
o Rhodopseudomonas palustris CGA009 TX73_020235 efflux RND transporter permease subunit cofit 69 99
o Herbaspirillum seropedicae SmR1 HSERO_RS02410 acriflavine resistance protein B strong 63 99
  Rhodopseudomonas palustris CGA009 TX73_007700 multidrug efflux RND transporter permease subunit insig. 63 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09445 multidrug efflux RND transporter permease subunit strong 62 97
o Ralstonia solanacearum UW163 UW163_RS04135 multidrug efflux RND transporter permease subunit insig. 62 97
o Ralstonia solanacearum PSI07 RPSI07_RS23905 hydrophobe/amphiphile efflux-1 family RND transporter strong 62 97
o Ralstonia solanacearum GMI1000 RS_RS00045 multidrug efflux RND transporter permease subunit strong 62 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2954 RND efflux system, inner membrane transporter CmeB strong 64 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4772 RND efflux system, inner membrane transporter CmeB strong 64 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS05315 efflux RND transporter permease subunit strong 62 97
o Pseudomonas fluorescens FW300-N2C3 AO356_28730 acriflavine resistance protein B strong 64 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1661 RND efflux system, inner membrane transporter CmeB strong 64 97
o Pseudomonas sp. DMC3 GFF2918 Multidrug efflux pump subunit AcrB cofit 63 97
o Pseudomonas fluorescens FW300-N2E3 AO353_26845 acriflavine resistance protein B strong 64 97
  Rhodopseudomonas palustris CGA009 TX73_014175 multidrug efflux RND transporter permease subunit insig. 63 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02772 Multidrug resistance protein MexB cofit 63 99
o Pseudomonas sp. RS175 PFR28_02463 Multidrug resistance protein MexB insig. 64 97
o Pseudomonas fluorescens SBW25 PFLU_RS13280 multidrug efflux RND transporter permease subunit insig. 63 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13280 multidrug efflux RND transporter permease subunit sig. 63 97
o Pseudomonas simiae WCS417 PS417_12585 acriflavine resistance protein B strong 64 97
o Pseudomonas sp. SVBP6 COO64_RS25445 efflux RND transporter permease subunit insig. 63 100
o Pseudomonas sp. BP01 JOY50_RS19675 efflux RND transporter permease subunit insig. 63 97
o Pseudomonas putida KT2440 PP_3456 Multidrug resistance protein MexB strong 64 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3840 RND efflux system, inner membrane transporter CmeB insig. 61 100
o Variovorax sp. OAS795 ABID97_RS00325 efflux RND transporter permease subunit strong 61 97
o Acidovorax sp. GW101-3H11 Ac3H11_4448 RND efflux system, inner membrane transporter CmeB strong 61 97
o Castellaniella sp019104865 MT123 ABCV34_RS04225 efflux RND transporter permease subunit cofit 59 99
o Variovorax sp. SCN45 GFF3725 RND efflux system, inner membrane transporter insig. 61 97
o Cupriavidus basilensis FW507-4G11 RR42_RS20650 multidrug efflux RND transporter permease subunit strong 58 100
o Pseudomonas aeruginosa PA14 IKLFDK_00520 multidrug efflux RND transporter permease subunit MexD insig. 59 100
  Herbaspirillum seropedicae SmR1 HSERO_RS19775 acriflavine resistance protein B strong 59 98
  Pseudomonas putida KT2440 PP_2818 Multidrug efflux RND transporter MexD strong 59 100
o Pseudomonas syringae pv. syringae B728a Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 strong 59 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 strong 59 99
o Dechlorosoma suillum PS Dsui_3182 hydrophobe/amphiphile efflux-1 (HAE1) family transporter no data 57 99
o Dickeya dadantii 3937 DDA3937_RS07155 multidrug efflux RND transporter permease subunit insig. 57 97
o Azospirillum brasilense Sp245 AZOBR_RS05000 acriflavine resistance protein B insig. 58 97
  Ralstonia solanacearum GMI1000 RS_RS18645 multidrug efflux RND transporter permease subunit insig. 57 97
o Klebsiella pneumoniae MKP103 KDGMDA_23785 multidrug efflux RND transporter permease subunit KexD insig. 55 99
  Azospirillum brasilense Sp245 AZOBR_RS30185 multidrug transporter insig. 54 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21905 hydrophobe/amphiphile efflux-1 family RND transporter insig. 58 97
  Pseudomonas aeruginosa PA14 IKLFDK_09870 multidrug efflux RND transporter permease subunit MexY no data 54 99
  Azospirillum sp. SherDot2 MPMX19_05884 Multidrug efflux pump subunit AcrB insig. 54 99
  Pseudomonas sp. S08-1 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 53 100
  Ralstonia sp. UNC404CL21Col ABZR87_RS09795 efflux RND transporter permease subunit insig. 55 97
  Klebsiella pneumoniae MKP103 KDGMDA_14835 acriflavine resistance protein B strong 54 97
o Acinetobacter baumannii LAC-4 RR41_RS13230 multidrug efflux RND transporter permease subunit AdeB insig. 54 97
  Enterobacter sp. TBS_079 MPMX20_01064 Multidrug efflux pump subunit AcrB strong 53 97
  Enterobacter asburiae PDN3 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 53 97
  Klebsiella michiganensis M5al BWI76_RS06775 multidrug efflux RND transporter permease subunit strong 53 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04170 multidrug efflux pump strong 52 99
  Rahnella sp. WP5 EX31_RS22470 multidrug efflux RND transporter permease subunit cofit 53 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4379 RND efflux system, inner membrane transporter CmeB sig. 53 97
  Pseudomonas fluorescens SBW25 PFLU_RS15665 multidrug efflux RND transporter permease subunit insig. 55 98
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15665 multidrug efflux RND transporter permease subunit insig. 55 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS02525 efflux RND transporter permease subunit strong 52 99
  Escherichia coli ECOR27 NOLOHH_09440 acrF multidrug efflux RND transporter permease subunit AcrF insig. 53 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00439 Multidrug export protein AcrF insig. 53 97
  Cupriavidus basilensis FW507-4G11 RR42_RS32420 multidrug efflux RND transporter permease subunit insig. 53 99
  Paraburkholderia graminis OAS925 ABIE53_003408 multidrug efflux pump strong 52 99
  Escherichia fergusonii Becca EFB2_00558 Multidrug export protein AcrF insig. 53 97
  Escherichia coli ECRC62 BNILDI_02080 acrF multidrug efflux RND transporter permease subunit AcrF insig. 53 97
  Pseudomonas putida KT2440 PP_1385 Probable efflux pump membrane transporter TtgB strong 52 99
  Escherichia coli Nissle 1917 ECOLIN_RS18755 multidrug efflux RND transporter permease subunit AcrF insig. 53 97
  Klebsiella pneumoniae MKP103 KDGMDA_06465 hydrophobe/amphiphile efflux-1 family RND transporter insig. 53 97
  Pseudomonas sp. BP01 JOY50_RS14445 ttgB multidrug efflux RND transporter permease subunit TtgB cofit 53 99
  Escherichia coli BL21 ECD_00413 multidrug efflux system protein strong 53 97
  Escherichia fergusonii Becca EFB2_03596 Multidrug efflux pump subunit AcrB insig. 53 97
  Escherichia coli ECOR27 NOLOHH_01140 acrB efflux RND transporter permease AcrB insig. 53 97
  Escherichia coli ECOR38 HEPCGN_06820 acrB efflux RND transporter permease AcrB strong 53 97
  Escherichia coli ECRC62 BNILDI_22555 acrB efflux RND transporter permease AcrB insig. 53 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03212 Multidrug efflux pump subunit AcrB cofit 53 97
  Escherichia coli Nissle 1917 ECOLIN_RS02750 efflux RND transporter permease AcrB sig. 53 97
  Escherichia coli BW25113 b0462 acrB multidrug efflux system protein (NCBI) strong 53 97
  Escherichia coli BL21 ECD_03124 multidrug efflux system protein insig. 53 97
  Escherichia coli ECRC100 OKFHMN_08205 acrB efflux RND transporter permease AcrB cofit 53 97
  Escherichia coli ECRC101 MCAODC_27430 acrB efflux RND transporter permease AcrB cofit 53 97
  Escherichia coli ECRC102 NIAGMN_06260 acrB efflux RND transporter permease AcrB cofit 53 97
  Escherichia coli ECRC99 KEDOAH_19760 acrB efflux RND transporter permease AcrB no data 53 97
  Escherichia coli BW25113 b3266 acrF multidrug efflux system protein (NCBI) insig. 53 97
  Shewanella oneidensis MR-1 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) strong 52 99
  Pseudomonas sp. RS175 PFR28_02080 Multidrug resistance protein MexB insig. 55 100
  Methylophilus sp. DMC18 GFF2593 Multidrug efflux pump subunit AcrB insig. 53 98
  Klebsiella michiganensis M5al BWI76_RS25585 multidrug efflux RND transporter permease subunit insig. 53 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2116 RND efflux system, inner membrane transporter CmeB insig. 52 97
  Erwinia amylovora T8 OLJFJH_17855 multidrug efflux RND transporter permease subunit AcrB strong 53 97
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_16580 adeB hydrophobe/amphiphile efflux-1 family RND transporter no data 53 97
  Pseudomonas sp. SVBP6 COO64_RS26275 efflux RND transporter permease subunit cofit 52 99
  Pseudomonas stutzeri RCH2 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 52 100
  Dickeya dadantii 3937 DDA3937_RS05735 multidrug efflux RND transporter permease subunit strong 53 99
  Erwinia tracheiphila SCR3 LU632_RS18185 efflux RND transporter permease subunit no data 53 97
  Burkholderia phytofirmans PsJN BPHYT_RS16170 multidrug efflux RND transporter permease subunit no data 52 99
  Pseudomonas sp. DMC3 GFF2212 Toluene efflux pump membrane transporter TtgB cofit 52 99
  Burkholderia phytofirmans PsJN BPHYT_RS07195 multidrug efflux RND transporter permease subunit insig. 52 99
  Shewanella sp. ANA-3 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) strong 52 98
  Enterobacter asburiae PDN3 EX28DRAFT_0964 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 54 99
  Enterobacter asburiae PDN3 EX28DRAFT_3319 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 52 97