Homologs of AO353_27685 from Pseudomonas fluorescens FW300-N2E3

cold-shock protein
SEED: Cold shock protein CspD
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E3 AO353_27685 cold-shock protein strong 100 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2644 Cold shock protein CspD insig. 79 88
o Pseudomonas sp. S08-1 OH686_00225 cold shock domain protein CspD insig. 73 91
o Pseudomonas fluorescens SBW25 PFLU_RS18560 cold shock domain-containing protein CspD insig. 83 84
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18560 cold shock domain-containing protein CspD insig. 83 84
  Pseudomonas simiae WCS417 PS417_16520 cold-shock protein insig. 83 81
o Pseudomonas sp. RS175 PFR28_02615 hypothetical protein insig. 76 84
o Pseudomonas putida KT2440 PP_4010 DNA replication inhibitor strong 84 72
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4053 Cold shock protein CspD insig. 71 88
o Pseudomonas stutzeri RCH2 Psest_2025 cold shock domain protein CspD strong 70 87
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_290 Cold shock protein CspD insig. 70 84
o Pseudomonas syringae pv. syringae B728a Psyr_3185 cold-shock DNA-binding protein family no data 67 88
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3185 cold-shock DNA-binding protein family no data 67 88
o Pseudomonas fluorescens FW300-N2C3 AO356_22140 cold-shock protein insig. 81 69
  Cupriavidus basilensis FW507-4G11 RR42_RS17115 cold-shock protein no data 73 72
  Vibrio cholerae E7946 ATCC 55056 CSW01_05795 cold-shock protein CspD insig. 69 70
  Paraburkholderia sabiae LMG 24235 QEN71_RS02995 cold shock domain-containing protein CspD sig. 69 75
  Marinobacter adhaerens HP15 HP15_2082 cold-shock DNA-binding domain protein cofit 69 72
  Shewanella amazonensis SB2B Sama_2058 cold-shock DNA-binding domain-containing protein (RefSeq) sig. 69 75
  Alteromonas macleodii MIT1002 MIT1002_01832 Cold shock-like protein CspD cofit 70 72
  Shewanella sp. ANA-3 Shewana3_1751 cold-shock DNA-binding protein family protein (RefSeq) strong 70 72
  Shewanella oneidensis MR-1 SO2628 cspD stress response protein CspD (NCBI ptt file) strong 70 72
  Serratia liquefaciens MT49 IAI46_08505 cold shock-like protein CspD insig. 72 69
  Shewanella loihica PV-4 Shew_1564 cold-shock DNA-binding domain-containing protein (RefSeq) sig. 68 73
  Escherichia coli BL21 ECD_00885 inhibitor of DNA replication, cold shock protein-like protein no data 65 80
  Escherichia fergusonii Becca EFB2_03181 Cold shock-like protein CspD insig. 65 80
  Escherichia coli ECOR27 NOLOHH_22195 cspD cold shock-like protein CspD no data 65 80
  Escherichia coli ECOR38 HEPCGN_22885 cspD cold shock-like protein CspD cofit 65 80
  Escherichia coli ECRC101 OKFHMN_05800 cspD cold shock-like protein CspD no data 65 80
  Escherichia coli ECRC101 MCAODC_25015 cspD cold shock-like protein CspD insig. 65 80
  Escherichia coli ECRC102 NIAGMN_03840 cspD cold shock-like protein CspD no data 65 80
  Escherichia coli ECRC62 BNILDI_20450 cspD cold shock-like protein CspD insig. 65 80
  Escherichia coli ECRC98 JDDGAC_09435 cspD cold shock-like protein CspD no data 65 80
  Escherichia coli ECRC99 KEDOAH_22110 cspD cold shock-like protein CspD no data 65 80
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02788 Cold shock-like protein CspD no data 65 80
  Escherichia coli Nissle 1917 ECOLIN_RS04685 cold shock-like protein CspD no data 65 80
  Escherichia coli BW25113 b0880 cspD cold shock protein homolog (NCBI) insig. 65 80
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS18735 cold-shock protein insig. 69 75
  Ralstonia solanacearum GMI1000 RS_RS22215 cold-shock protein sig. 69 75
  Ralstonia solanacearum PSI07 RPSI07_RS04860 cold-shock protein no data 69 75
  Ralstonia solanacearum UW163 UW163_RS20395 cold-shock protein insig. 69 75
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4903 Cold shock protein CspD no data 70 69
  Burkholderia phytofirmans PsJN BPHYT_RS15720 cold-shock protein no data 65 74
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04084 cold-shock DNA-binding protein family no data 65 74
  Paraburkholderia graminis OAS925 ABIE53_003308 CspA family cold shock protein no data 65 74
  Enterobacter sp. TBS_079 MPMX20_01542 Cold shock-like protein CspD strong 64 78
  Enterobacter asburiae PDN3 EX28DRAFT_2052 cold shock domain protein CspD insig. 63 78
  Klebsiella michiganensis M5al BWI76_RS09605 cold-shock protein no data 69 69
  Dechlorosoma suillum PS Dsui_0007 cold shock protein insig. 64 75
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS04820 cold-shock protein no data 64 75
  Ralstonia solanacearum UW163 UW163_RS08850 cold-shock protein no data 64 75
  Pectobacterium carotovorum WPP14 HER17_RS12410 cold shock-like protein CspD insig. 66 72
  Herbaspirillum seropedicae SmR1 HSERO_RS07020 cold-shock protein no data 63 75
  Ralstonia solanacearum GMI1000 RS_RS12380 cold-shock protein no data 63 75
  Ralstonia solanacearum PSI07 RPSI07_RS12565 cold-shock protein no data 64 75
  Dickeya dadantii 3937 DDA3937_RS09550 cold shock-like protein CspD sig. 67 69
  Ralstonia sp. UNC404CL21Col ABZR87_RS00445 cold-shock protein strong 64 75
  Castellaniella sp019104865 MT123 ABCV34_RS05315 cold-shock protein insig. 63 73
  Dickeya dianthicola 67-19 HGI48_RS09565 cold shock-like protein CspD cofit 66 69
  Dickeya dianthicola ME23 DZA65_RS09875 cold shock-like protein CspD insig. 66 69
  Ralstonia sp. UNC404CL21Col ABZR87_RS19675 cold-shock protein insig. 66 72
  Pantoea sp. MT58 IAI47_12955 cold shock-like protein CspD insig. 64 69
  Rahnella sp. WP5 EX31_RS18570 cold shock-like protein CspD strong 58 78
  Ralstonia solanacearum GMI1000 RS_RS17205 cold-shock protein strong 64 72
  Ralstonia solanacearum PSI07 RPSI07_RS00010 cold-shock protein no data 64 72
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23260 cold-shock protein no data 64 72
  Ralstonia solanacearum UW163 UW163_RS16510 cold-shock protein no data 64 72
  Herbaspirillum seropedicae SmR1 HSERO_RS15195 cold-shock protein no data 63 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS35875 cold-shock protein insig. 61 72
  Ralstonia sp. UNC404CL21Col ABZR87_RS16270 cold-shock protein strong 63 72
  Burkholderia phytofirmans PsJN BPHYT_RS17545 cold-shock protein sig. 59 72
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05686 cold-shock DNA-binding protein family no data 59 72
  Paraburkholderia graminis OAS925 ABIE53_003669 CspA family cold shock protein strong 59 72
  Paraburkholderia graminis OAS925 ABIE53_004735 CspA family cold shock protein strong 57 78
  Paraburkholderia sabiae LMG 24235 QEN71_RS36275 cold-shock protein no data 61 72
  Cupriavidus basilensis FW507-4G11 RR42_RS37535 cold-shock protein no data 59 72
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03525 cold-shock DNA-binding protein family sig. 58 75
  Paraburkholderia sabiae LMG 24235 QEN71_RS41860 cold-shock protein no data 61 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS43010 cold-shock protein insig. 61 72
  Burkholderia phytofirmans PsJN BPHYT_RS34185 cold-shock protein sig. 57 75
  Paraburkholderia sabiae LMG 24235 QEN71_RS39145 cold-shock protein no data 59 72
  Burkholderia phytofirmans PsJN BPHYT_RS33480 cold-shock protein no data 61 72
  Burkholderia phytofirmans PsJN BPHYT_RS10920 cold-shock protein no data 59 72
  Pseudomonas simiae WCS417 PS417_19715 cold-shock protein no data 59 72
  Cupriavidus basilensis FW507-4G11 RR42_RS20855 cold-shock protein sig. 58 75
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01154 cold-shock DNA-binding protein family no data 58 72
  Paraburkholderia graminis OAS925 ABIE53_002280 CspA family cold shock protein no data 58 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS27700 cold-shock protein no data 54 75
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03861 cold-shock DNA-binding protein family no data 59 72
  Paraburkholderia graminis OAS925 ABIE53_004916 CspA family cold shock protein no data 59 72
  Paraburkholderia sabiae LMG 24235 QEN71_RS03700 cold-shock protein insig. 58 72
  Paraburkholderia graminis OAS925 ABIE53_003225 CspA family cold shock protein sig. 58 72
  Burkholderia phytofirmans PsJN BPHYT_RS15270 cold-shock protein no data 58 72
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00535 cold-shock protein no data 58 66
  Lysobacter sp. OAE881 ABIE51_RS13800 cold-shock protein strong 54 73
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3660.1 Cold shock protein CspD insig. 53 72
  Alteromonas macleodii MIT1002 MIT1002_03628 Cold shock-like protein CspG cofit 53 76
  Kangiella aquimarina DSM 16071 B158DRAFT_1826 Cold shock proteins strong 55 74
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4727 Cold shock protein CspD insig. 62 69
  Pseudomonas fluorescens SBW25 PFLU_RS21685 cold-shock protein insig. 58 72