Homologs of AMB_RS11175 from Magnetospirillum magneticum AMB-1

murein L,D-transpeptidase
SEED: FIG00779127: hypothetical protein

88 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Magnetospirillum magneticum AMB-1 AMB_RS11175 murein L,D-transpeptidase cofit 100 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05805 hypothetical protein insig. 33 86
o Marinobacter adhaerens HP15 HP15_2647 peptidoglycan-binding domain 1 protein insig. 35 91
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS17515 L,D-transpeptidase family protein insig. 38 89
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11545 L,D-transpeptidase family protein cofit 40 87
  Caulobacter crescentus NA1000 CCNA_01579 cell wall degradation protein cofit 39 69
  Caulobacter crescentus NA1000 Δfur CCNA_01579 cell wall degradation protein cofit 39 69
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3403 Uncharacterized protein conserved in bacteria sig. 41 70
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2132 Uncharacterized protein conserved in bacteria insig. 33 87
o Rhodanobacter denitrificans MT42 LRK55_RS05975 L,D-transpeptidase family protein insig. 37 89
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS06230 L,D-transpeptidase family protein insig. 37 89
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08855 L,D-transpeptidase family protein strong 37 88
o Dinoroseobacter shibae DFL-12 Dshi_1619 Peptidoglycan-binding domain 1 protein (RefSeq) sig. 36 97
  Xanthobacter sp. DMC5 GFF3956 hypothetical protein sig. 35 88
o Pseudomonas sp. DMC3 GFF1646 putative L,D-transpeptidase YcbB cofit 33 94
  Rhizobium sp. OAE497 ABIE40_RS06710 L,D-transpeptidase family protein sig. 41 62
  Rhodospirillum rubrum S1H Rru_A1936 ErfK/YbiS/YcfS/YnhG (NCBI) insig. 39 67
o Rhodanobacter sp. FW510-T8 OKGIIK_00395 Peptidoglycan-binding protein insig. 36 89
o Phaeobacter inhibens DSM 17395 PGA1_c16010 putative L,D-transpeptidase strong 32 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_42 hypothetical protein insig. 33 89
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3972 hypothetical protein insig. 33 89
o Shewanella oneidensis MR-1 SO1899 conserved hypothetical protein (NCBI ptt file) insig. 31 88
o Cupriavidus basilensis FW507-4G11 RR42_RS09545 peptidase insig. 36 81
  Sphingobium sp. HT1-2 GFF3067 hypothetical protein cofit 38 69
o Pseudomonas fluorescens FW300-N2C3 AO356_26185 peptidoglycan-binding protein insig. 35 88
o Pseudomonas simiae WCS417 PS417_15375 peptidoglycan-binding protein insig. 33 87
  Bosea sp. OAE506 ABIE41_RS22910 L,D-transpeptidase family protein insig. 37 64
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1111 cell wall degradation protein insig. 34 88
o Pseudomonas fluorescens SBW25 PFLU_RS17345 L,D-transpeptidase family protein insig. 32 93
o Pseudomonas fluorescens SBW25-INTG PFLU_RS17345 L,D-transpeptidase family protein sig. 32 93
o Pseudomonas fluorescens FW300-N2E3 AO353_29055 peptidoglycan-binding protein insig. 33 91
o Pseudomonas sp. RS175 PFR28_01849 hypothetical protein insig. 33 87
o Shewanella sp. ANA-3 Shewana3_1674 peptidoglycan binding domain-containing protein (RefSeq) insig. 30 89
  Dickeya dadantii 3937 DDA3937_RS12930 L,D-transpeptidase cofit 34 70
  Shewanella loihica PV-4 Shew_1828 peptidoglycan binding domain-containing protein (RefSeq) insig. 34 67
  Bosea sp. OAE506 ABIE41_RS06140 L,D-transpeptidase family protein insig. 34 81
  Sinorhizobium meliloti 1021 SMc01769 hypothetical protein strong 36 70
  Kangiella aquimarina DSM 16071 B158DRAFT_1180 Uncharacterized protein conserved in bacteria insig. 32 83
  Dickeya dianthicola 67-19 HGI48_RS13005 L,D-transpeptidase insig. 33 65
  Dickeya dianthicola ME23 DZA65_RS13465 L,D-transpeptidase insig. 33 65
  Agrobacterium fabrum C58 Atu1164 hypothetical protein strong 36 63
  Shewanella amazonensis SB2B Sama_1612 peptidoglycan binding domain-containing protein (RefSeq) insig. 37 63
o Castellaniella sp019104865 MT123 ABCV34_RS14875 L,D-transpeptidase family protein insig. 34 82
  Shewanella oneidensis MR-1 SO2109 conserved hypothetical protein (NCBI ptt file) insig. 34 61
o Pseudomonas stutzeri RCH2 Psest_4007 Uncharacterized protein conserved in bacteria sig. 32 89
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2133 Uncharacterized protein conserved in bacteria insig. 30 88
  Klebsiella pneumoniae MKP103 KDGMDA_18050 L D-transpeptidase insig. 35 63
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03475 putative L,D-transpeptidase YcbB cofit 33 90
  Pectobacterium carotovorum WPP14 HER17_RS12045 L,D-transpeptidase cofit 32 66
  Pantoea sp. MT58 IAI47_12780 L,D-transpeptidase insig. 39 56
o Vibrio cholerae E7946 ATCC 55056 CSW01_06405 murein L,D-transpeptidase insig. 30 96
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04550 L,D-transpeptidase cofit 38 57
o Escherichia coli ECRC100 OKFHMN_05400 ldtD L,D-transpeptidase insig. 31 86
o Escherichia coli ECRC101 MCAODC_24790 ldtD L,D-transpeptidase insig. 31 86
o Escherichia coli ECRC102 NIAGMN_03120 ldtD L,D-transpeptidase insig. 31 86
o Escherichia coli ECRC98 JDDGAC_09010 ldtD L,D-transpeptidase insig. 31 86
o Escherichia coli ECRC99 KEDOAH_22335 ldtD L,D-transpeptidase no data 31 86
o Pseudomonas segetis P6 MPMX49_00416 hypothetical protein insig. 30 87
o Escherichia coli Nissle 1917 ECOLIN_RS04895 L,D-transpeptidase insig. 31 86
o Escherichia coli ECRC62 BNILDI_20215 ldtD L,D-transpeptidase insig. 31 86
o Escherichia coli BL21 ECD_00929 murein L,D-transpeptidase insig. 31 86
o Escherichia fergusonii Becca EFB2_03139 putative L,D-transpeptidase YcbB insig. 31 86
o Escherichia coli ECOR27 NOLOHH_21960 ldtD L,D-transpeptidase insig. 31 86
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02742 hypothetical protein insig. 31 86
o Escherichia coli BW25113 b0925 ycbB predicted carboxypeptidase (NCBI) sig. 31 86
  Klebsiella michiganensis M5al BWI76_RS09850 L,D-transpeptidase sig. 34 68
  Sinorhizobium meliloti 1021 SMc00150 hypothetical protein strong 31 89
  Shewanella sp. ANA-3 Shewana3_1889 peptidoglycan binding domain-containing protein (RefSeq) insig. 37 54
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_20385 ldtD L D-transpeptidase insig. 37 54
o Escherichia coli ECOR38 HEPCGN_23125 ldtD L,D-transpeptidase insig. 30 86
  Enterobacter sp. TBS_079 MPMX20_01583 putative L,D-transpeptidase YcbB strong 33 71
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3682 L,D-transpeptidase YcbB insig. 33 70
  Erwinia tracheiphila SCR3 LU632_RS09885 ldtD L,D-transpeptidase insig. 37 54
  Agrobacterium fabrum C58 Atu1615 hypothetical protein sig. 29 88
  Enterobacter asburiae PDN3 EX28DRAFT_2011 Uncharacterized protein conserved in bacteria insig. 35 62
  Rhodopseudomonas palustris CGA009 TX73_021710 L,D-transpeptidase family protein insig. 29 89
  Erwinia amylovora T8 OLJFJH_16060 L D-transpeptidase strong 36 55
  Rahnella sp. WP5 EX31_RS18160 L,D-transpeptidase insig. 37 52
  Serratia liquefaciens MT49 IAI46_08735 L,D-transpeptidase insig. 36 52
  Sphingobium sp. HT1-2 GFF5155 peptidoglycan binding domain-containing protein cofit 33 86
  Sphingobium sp. HT1-2 GFF2050 hypothetical protein cofit 33 69
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11480 L,D-transpeptidase family protein insig. 33 47
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS03645 L,D-transpeptidase strong 32 49
  Sphingobium sp. HT1-2 GFF4356 hypothetical protein insig. 36 48
  Azospirillum sp. SherDot2 MPMX19_00776 hypothetical protein insig. 32 63
  Azospirillum sp. SherDot2 MPMX19_03827 hypothetical protein insig. 34 58
  Bacteroides ovatus ATCC 8483 BACOVA_05164 hypothetical protein insig. 31 46
  Azospirillum brasilense Sp245 AZOBR_RS16575 hypothetical protein insig. 34 57