Homologs of ABIE53_004518 from Paraburkholderia graminis OAS925

diguanylate cyclase (GGDEF)-like protein
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Paraburkholderia graminis OAS925 ABIE53_004518 diguanylate cyclase (GGDEF)-like protein insig. 100 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03735 diguanylate cyclase/phosphodiesterase insig. 92 84
o Burkholderia phytofirmans PsJN BPHYT_RS35610 diguanylate cyclase insig. 84 84
  Azospirillum brasilense Sp245 AZOBR_RS30045 uncharacterized signaling protein CC_0091 insig. 45 57
  Sinorhizobium meliloti 1021 SMa1548 Diguanylate cyclase/phosphodiesterase insig. 41 59
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3423 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 43 55
  Caulobacter crescentus NA1000 CCNA_03191 PAS-family GGDEF/EAL family protein cofit 44 55
  Caulobacter crescentus NA1000 Δfur CCNA_03191 PAS-family GGDEF/EAL family protein cofit 44 55
  Rhodopseudomonas palustris CGA009 TX73_004010 EAL domain-containing protein insig. 44 54
  Rhodopseudomonas palustris CGA009 TX73_002030 EAL domain-containing protein insig. 42 55
  Pantoea sp. MT58 IAI47_03300 EAL domain-containing protein insig. 40 56
  Ralstonia solanacearum GMI1000 RS_RS07755 GGDEF-domain containing protein insig. 43 57
  Agrobacterium fabrum C58 Atu4628 diguanylate cyclase insig. 40 56
  Agrobacterium fabrum C58 Atu3495 diguanylate cyclase sig. 42 55
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 42 61
  Rahnella sp. WP5 EX31_RS09160 EAL domain-containing protein insig. 40 54
  Rhodopseudomonas palustris CGA009 TX73_017630 EAL domain-containing protein insig. 42 55
  Acidovorax sp. GW101-3H11 Ac3H11_1143 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 41 59
  Caulobacter crescentus NA1000 CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 43 58
  Caulobacter crescentus NA1000 Δfur CCNA_00089 MHYT/PAS-family GGDEF/EAL protein cofit 43 58
  Rhodopseudomonas palustris CGA009 TX73_015335 EAL domain-containing protein insig. 40 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_39 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 41 55
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3704 diguanylate cyclase (GGDEF) domain insig. 40 58
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 55
  Pseudomonas fluorescens FW300-N2E3 AO353_22910 histidine kinase insig. 40 56
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_467 Sensory box/GGDEF family protein insig. 39 60
  Pseudomonas fluorescens SBW25 PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 60
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13445 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 60
  Synechococcus elongatus PCC 7942 Synpcc7942_1859 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 40 56
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3422 diguanylate cyclase (GGDEF) domain insig. 41 54
  Rhizobium sp. OAE497 ABIE40_RS00480 EAL domain-containing protein insig. 41 56
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4670 Sensory box/GGDEF family protein insig. 40 55
  Pseudomonas simiae WCS417 PS417_12760 histidine kinase insig. 39 60
  Pseudomonas stutzeri RCH2 Psest_1712 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 40 56
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 55
  Herbaspirillum seropedicae SmR1 HSERO_RS08500 hypothetical protein insig. 42 54
  Pseudomonas fluorescens FW300-N2C3 AO356_22925 histidine kinase insig. 40 55
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 41 54
  Pseudomonas sp. RS175 PFR28_02457 putative signaling protein insig. 40 56
  Rhizobium sp. OAE497 ABIE40_RS13060 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 55
  Dechlorosoma suillum PS Dsui_0506 diguanylate cyclase (GGDEF) domain-containing protein cofit 42 55
  Pseudomonas sp. S08-1 OH686_03710 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 40 57
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3263 Sensory box/GGDEF family protein insig. 40 55
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 38 58
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2238 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 57
  Rhizobium sp. OAE497 ABIE40_RS15540 EAL domain-containing protein insig. 42 56
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 40 57
  Ralstonia solanacearum PSI07 RPSI07_RS15375 GGDEF-domain containing protein insig. 42 56
  Klebsiella michiganensis M5al BWI76_RS18710 GGDEF-domain containing protein strong 39 54
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 39 56
  Caulobacter crescentus NA1000 CCNA_00777 PAS family GGDEF/EAL protein cofit 42 55
  Caulobacter crescentus NA1000 Δfur CCNA_00777 PAS family GGDEF/EAL protein cofit 42 55
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 57
  Burkholderia phytofirmans PsJN BPHYT_RS00875 diguanylate cyclase insig. 41 56
  Cupriavidus basilensis FW507-4G11 RR42_RS37310 diguanylate cyclase insig. 40 58
  Bosea sp. OAE506 ABIE41_RS24040 EAL domain-containing protein strong 39 59
  Pantoea sp. MT58 IAI47_03280 EAL domain-containing protein insig. 38 58
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 38 58
  Desulfovibrio vulgaris Hildenborough JW710 DVU2432 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 39 57
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 40 55
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 56
  Caulobacter crescentus NA1000 CCNA_00900 CHASE4-family GGDEF/EAL protein insig. 42 59
  Caulobacter crescentus NA1000 Δfur CCNA_00900 CHASE4-family GGDEF/EAL protein cofit 42 59
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 54
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 37 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS30040 EAL domain-containing protein insig. 42 54
  Pseudomonas sp. RS175 PFR28_04760 hypothetical protein strong 42 56
  Acidovorax sp. GW101-3H11 Ac3H11_4670 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 56
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 40 55
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 39 55
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 40 55
  Cupriavidus basilensis FW507-4G11 RR42_RS16480 diguanylate cyclase insig. 39 57
  Herbaspirillum seropedicae SmR1 HSERO_RS16570 membrane protein insig. 39 57
  Pseudomonas putida KT2440 PP_3581 conserved membrane protein of unknown function insig. 39 56
  Pseudomonas syringae pv. syringae B728a Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 36 60
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2486 diguanylate cyclase/phosphodiesterase insig. 36 60
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 39 55
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 39 55
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 39 55
  Enterobacter asburiae PDN3 EX28DRAFT_1441 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 38 58
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 39 55
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 39 55
  Pseudomonas sp. RS175 PFR28_01206 hypothetical protein insig. 38 56
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 39 55
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 40 55
  Pseudomonas sp. S08-1 OH686_04490 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 56
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 39 55
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 39 55
  Acidovorax sp. GW101-3H11 Ac3H11_2715 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 57
  Azospirillum sp. SherDot2 MPMX19_04641 hypothetical protein insig. 40 56
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 38 57
  Pseudomonas putida KT2440 PP_0218 Sensory box protein strong 41 56
  Pseudomonas fluorescens FW300-N2C3 AO356_10695 diguanylate cyclase strong 41 55
  Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 40 57
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 39 56
  Ralstonia solanacearum GMI1000 RS_RS02540 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 54
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02050 GGDEF-domain containing protein insig. 41 56
  Ralstonia solanacearum UW163 UW163_RS15375 GGDEF-domain containing protein insig. 41 56
  Desulfovibrio vulgaris Miyazaki F DvMF_2963 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 40 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS08805 EAL domain-containing protein insig. 39 58