Homologs of Shew_1645 from Shewanella loihica PV-4

sigma-54 dependent trancsriptional regulator (RefSeq)
SEED: Sigma-54 dependent transcriptional regulator

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_1645 sigma-54 dependent trancsriptional regulator (RefSeq) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_0526 sigma-54 dependent trancsriptional regulator (RefSeq) cofit 48 98
o Shewanella amazonensis SB2B Sama_1418 response regulator receiver protein (RefSeq) insig. 47 96
o Kangiella aquimarina DSM 16071 B158DRAFT_1941 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains insig. 41 98
o Pseudomonas aeruginosa PA14 IKLFDK_09495 Fis family transcriptional regulator insig. 46 81
o Pseudomonas sp. RS175 PFR28_01679 Regulatory protein AtoC sig. 46 81
o Pseudomonas fluorescens FW300-N2C3 AO356_27825 Fis family transcriptional regulator insig. 46 81
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_763 Sigma-54 dependent transcriptional regulator insig. 46 81
o Pseudomonas sp. SVBP6 COO64_RS14675 sigma-54 dependent transcriptional regulator insig. 41 97
o Pseudomonas sp. DMC3 GFF3445 Transcriptional regulatory protein ZraR cofit 41 97
o Pseudomonas simiae WCS417 PS417_12465 Fis family transcriptional regulator insig. 45 81
o Paraburkholderia sabiae LMG 24235 QEN71_RS04320 sigma-54 dependent transcriptional regulator cofit 43 91
o Pseudomonas fluorescens SBW25 PFLU_RS13155 sigma-54-dependent Fis family transcriptional regulator insig. 44 81
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13155 sigma-54-dependent Fis family transcriptional regulator sig. 44 81
o Pseudomonas segetis P6 MPMX49_00228 Transcriptional regulatory protein ZraR insig. 46 81
o Pseudomonas fluorescens FW300-N2E3 AO353_25810 Fis family transcriptional regulator insig. 46 81
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3006 Sigma-54 dependent transcriptional regulator insig. 45 81
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02740 Regulatory protein AtoC insig. 40 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4731 Sigma-54 dependent transcriptional regulator sig. 45 80
o Pseudomonas putida KT2440 PP_3503 Sigma-54 dependent transcriptional regulator sig. 44 81
o Pseudomonas sp. BP01 JOY50_RS06050 sigma-54 dependent transcriptional regulator insig. 44 81
o Burkholderia phytofirmans PsJN BPHYT_RS14655 Fis family transcriptional regulator sig. 40 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS10690 sigma-54 dependent transcriptional regulator insig. 40 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS04280 sigma-54 dependent transcriptional regulator insig. 42 87
o Paraburkholderia graminis OAS925 ABIE53_003114 DNA-binding NtrC family response regulator strong 44 80
  Burkholderia phytofirmans PsJN BPHYT_RS26550 Fis family transcriptional regulator insig. 43 80
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04306 sigma54 specific transcriptional regulator, Fis family insig. 44 80
  Ralstonia solanacearum GMI1000 RS_RS05945 sigma-54-dependent Fis family transcriptional regulator insig. 45 76
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS15125 sigma-54-dependent Fis family transcriptional regulator insig. 43 82
o Ralstonia solanacearum UW163 UW163_RS12595 sigma-54-dependent Fis family transcriptional regulator insig. 43 82
  Ralstonia solanacearum PSI07 RPSI07_RS18245 sigma-54-dependent Fis family transcriptional regulator insig. 45 76
o Cupriavidus basilensis FW507-4G11 RR42_RS37520 Fis family transcriptional regulator sig. 44 82
o Ralstonia sp. UNC404CL21Col ABZR87_RS10765 sigma-54 dependent transcriptional regulator insig. 43 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02899 DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains insig. 39 96
  Burkholderia phytofirmans PsJN BPHYT_RS14695 Fis family transcriptional regulator insig. 42 82
  Burkholderia phytofirmans PsJN BPHYT_RS26915 Fis family transcriptional regulator insig. 41 91
  Paraburkholderia graminis OAS925 ABIE53_005893 DNA-binding NtrC family response regulator insig. 39 96
o Rhodanobacter sp. FW510-T8 OKGIIK_17035 Fis family transcriptional regulator insig. 40 88
  Paraburkholderia sabiae LMG 24235 QEN71_RS30970 sigma-54 dependent transcriptional regulator insig. 41 86
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS17395 sigma-54 dependent transcriptional regulator insig. 38 93
  Cupriavidus basilensis FW507-4G11 RR42_RS04185 Fis family transcriptional regulator insig. 41 82
o Rhodanobacter denitrificans MT42 LRK55_RS06340 sigma-54 dependent transcriptional regulator insig. 39 88
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS06595 sigma-54 dependent transcriptional regulator insig. 39 88
  Klebsiella pneumoniae MKP103 KDGMDA_10090 sigma-54-dependent response regulator transcription factor ZraR insig. 38 86
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4188 Response regulator of zinc sigma-54-dependent two-component system insig. 41 74
  Lysobacter sp. OAE881 ABIE51_RS00855 sigma-54 dependent transcriptional regulator insig. 44 76
  Klebsiella michiganensis M5al BWI76_RS01605 transcriptional regulatory protein ZraR insig. 41 74
  Kangiella aquimarina DSM 16071 B158DRAFT_0521 PEP-CTERM-box response regulator transcription factor strong 42 76
  Marinobacter adhaerens HP15 HP15_1891 two component, sigma54 specific, transcriptional regulator, Fis family insig. 42 75
  Rhodospirillum rubrum S1H Rru_A3104 Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) insig. 41 75
  Escherichia coli ECOR27 NOLOHH_05465 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 41 74
  Escherichia coli Nissle 1917 ECOLIN_RS23090 sigma-54-dependent response regulator transcription factor ZraR insig. 41 74
  Alteromonas macleodii MIT1002 MIT1002_03048 Transcriptional regulatory protein ZraR insig. 38 83
  Escherichia fergusonii Becca EFB2_04606 Transcriptional regulatory protein ZraR insig. 41 74
  Escherichia coli ECRC101 MCAODC_03820 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 41 74
  Escherichia coli ECRC102 NIAGMN_11070 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 41 74
  Escherichia coli ECRC99 KEDOAH_14840 zraR sigma-54-dependent response regulator transcription factor ZraR no data 41 74
  Escherichia coli BL21 ECD_03881 fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein insig. 41 74
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04045 Transcriptional regulatory protein ZraR insig. 41 74
  Escherichia coli ECRC98 JDDGAC_16945 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 41 74
  Escherichia coli ECOR38 HEPCGN_11960 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 40 74
  Escherichia coli BW25113 b4004 zraR fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) insig. 41 74
  Escherichia coli ECRC62 BNILDI_06055 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 40 74
  Escherichia coli ECRC100 OKFHMN_13320 zraR sigma-54-dependent response regulator transcription factor ZraR cofit 40 74
  Desulfovibrio vulgaris Miyazaki F DvMF_0823 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 42 74
  Desulfovibrio vulgaris Miyazaki F DvMF_0670 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 37 84
  Shewanella amazonensis SB2B Sama_2301 response regulator receiver protein (RefSeq) strong 37 75
  Sphingobium sp. HT1-2 GFF2313 Two-component system response regulator protein insig. 43 75
  Ralstonia solanacearum GMI1000 RS_RS25105 sigma-54-dependent Fis family transcriptional regulator cofit 40 74
  Pseudomonas syringae pv. syringae B728a Psyr_3461 Helix-turn-helix, Fis-type strong 41 71
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3461 Helix-turn-helix, Fis-type cofit 41 71
  Ralstonia sp. UNC404CL21Col ABZR87_RS23515 sigma-54 dependent transcriptional regulator strong 40 74
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1363 PEP-CTERM-box response regulator transcription factor strong 41 75
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23315 sigma-54-dependent Fis family transcriptional regulator strong 40 74
  Ralstonia solanacearum UW163 UW163_RS16565 sigma-54-dependent Fis family transcriptional regulator strong 40 74
  Ralstonia solanacearum PSI07 RPSI07_RS07835 sigma-54-dependent Fis family transcriptional regulator strong 41 74
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04163 Anaerobic nitric oxide reductase transcription regulator NorR strong 38 75
  Pseudomonas simiae WCS417 PS417_19825 ATPase AAA strong 37 75
  Pseudomonas fluorescens SBW25 PFLU_RS21795 sigma-54-dependent Fis family transcriptional regulator strong 39 69
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21795 sigma-54-dependent Fis family transcriptional regulator strong 39 69
  Pseudomonas simiae WCS417 PS417_05525 Fis family transcriptional regulator strong 39 76
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4389 Sigma-54 dependent transcriptional regulator insig. 44 64
  Desulfovibrio vulgaris Hildenborough JW710 DVU3220 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 42 71
  Shewanella oneidensis MR-1 SO3232 flrA flagellar regulatory protein A (NCBI ptt file) strong 36 75
  Herbaspirillum seropedicae SmR1 HSERO_RS13700 Fis family transcriptional regulator insig. 39 75
  Pseudomonas sp. RS175 PFR28_00828 Anaerobic nitric oxide reductase transcription regulator NorR strong 37 75
  Desulfovibrio vulgaris Miyazaki F DvMF_2149 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) strong 38 75
  Desulfovibrio vulgaris Miyazaki F DvMF_2200 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) no data 43 70
  Shewanella sp. ANA-3 Shewana3_1338 sigma-54 dependent trancsriptional regulator (RefSeq) strong 36 75
  Azospirillum sp. SherDot2 MPMX19_03461 Regulatory protein AtoC insig. 35 82
  Pseudomonas sp. BP01 JOY50_RS00705 fleQ transcriptional regulator FleQ sig. 34 84
  Pseudomonas fluorescens FW300-N2E3 AO353_18660 AAA family ATPase strong 37 75
  Pseudomonas sp. DMC3 GFF2445 Anaerobic nitric oxide reductase transcription regulator NorR cofit 37 75
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02520 Anaerobic nitric oxide reductase transcription regulator NorR cofit 45 64
  Rhodospirillum rubrum S1H Rru_A0993 Transcriptional Regulator, NifA, Fis Family (NCBI) strong 52 52
  Pseudomonas syringae pv. syringae B728a Psyr_0722 Two-component response regulator PilR insig. 39 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0722 Two-component response regulator PilR insig. 39 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3599 Flagellar regulatory protein FleQ insig. 37 75
  Pseudomonas syringae pv. syringae B728a Psyr_3011 Helix-turn-helix, Fis-type insig. 37 88
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3011 Helix-turn-helix, Fis-type insig. 37 88