Homologs of Dshi_2814 from Dinoroseobacter shibae DFL-12

diguanylate cyclase (RefSeq)
SEED: Sensory box/GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dinoroseobacter shibae DFL-12 Dshi_2814 diguanylate cyclase (RefSeq) sig. 100 100
o Phaeobacter inhibens DSM 17395 PGA1_c08600 diguanylate cyclase (GGDEF) domain-containing protein strong 49 91
  Shewanella oneidensis MR-1 SO1500 sensory box protein (NCBI ptt file) strong 43 50
  Shewanella sp. ANA-3 Shewana3_2929 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 43 50
  Rhizobium sp. OAE497 ABIE40_RS03985 EAL domain-containing protein insig. 38 58
  Rhizobium sp. OAE497 ABIE40_RS10135 EAL domain-containing protein insig. 42 53
  Shewanella loihica PV-4 Shew_2778 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 42 50
  Cupriavidus basilensis FW507-4G11 RR42_RS16480 diguanylate cyclase insig. 39 54
  Paraburkholderia sabiae LMG 24235 QEN71_RS30040 EAL domain-containing protein insig. 44 46
  Magnetospirillum magneticum AMB-1 AMB_RS21020 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 51
  Sinorhizobium meliloti 1021 SMc03178 hypothetical protein insig. 37 57
  Ralstonia sp. UNC404CL21Col ABZR87_RS22185 EAL domain-containing protein insig. 42 49
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21640 GGDEF domain-containing protein insig. 41 49
  Ralstonia solanacearum UW163 UW163_RS17545 GGDEF domain-containing protein insig. 41 49
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07185 EAL domain-containing protein cofit 38 50
  Pseudomonas stutzeri RCH2 Psest_1712 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 43 49
  Ralstonia solanacearum PSI07 RPSI07_RS01485 GGDEF domain-containing protein insig. 42 49
  Herbaspirillum seropedicae SmR1 HSERO_RS13970 diguanylate cyclase insig. 39 53
  Pseudomonas sp. RS175 PFR28_01206 hypothetical protein insig. 41 47
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3704 diguanylate cyclase (GGDEF) domain insig. 40 51
  Pseudomonas sp. S08-1 OH686_16635 hypothetical protein insig. 38 49
  Alteromonas macleodii MIT1002 MIT1002_00072 Bacteriophytochrome cph2 strong 40 52
  Ralstonia solanacearum GMI1000 RS_RS18985 GGDEF domain-containing protein insig. 42 49
  Rhodanobacter denitrificans MT42 LRK55_RS16650 EAL domain-containing protein strong 37 53
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16935 bifunctional diguanylate cyclase/phosphodiesterase strong 37 53
  Bosea sp. OAE506 ABIE41_RS13785 EAL domain-containing protein insig. 33 79
  Pseudomonas stutzeri RCH2 Psest_3216 diguanylate cyclase (GGDEF) domain strong 39 53
  Rhodanobacter sp. FW510-T8 OKGIIK_07905 Diguanylate cyclase insig. 39 51
  Marinobacter adhaerens HP15 HP15_3422 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 36 51
  Dechlorosoma suillum PS Dsui_0803 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 53
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 39 53
  Pseudomonas fluorescens FW300-N2C3 AO356_24815 diguanylate cyclase insig. 39 47
  Shewanella amazonensis SB2B Sama_3265 GGDEF domain-containing protein (RefSeq) insig. 40 51
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03268 diguanylate cyclase/phosphodiesterase insig. 37 58
  Pseudomonas sp. RS175 PFR28_04630 hypothetical protein insig. 39 50
  Herbaspirillum seropedicae SmR1 HSERO_RS04295 diguanylate cyclase strong 36 47
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 39 47
  Pantoea sp. MT58 IAI47_06895 diguanylate cyclase insig. 39 57
  Pseudomonas fluorescens FW300-N2C3 AO356_02520 diguanylate cyclase cofit 38 47
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_39 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 45
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 47
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 38 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3860 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 47
  Pseudomonas sp. RS175 PFR28_02098 hypothetical protein insig. 38 55
  Magnetospirillum magneticum AMB-1 AMB_RS07755 PAS domain S-box protein insig. 42 48
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2329 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) strong 38 47
  Shewanella sp. ANA-3 Shewana3_4330 diguanylate cyclase with GAF sensor (RefSeq) insig. 38 53
  Variovorax sp. SCN45 GFF3184 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 50
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_656 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 47
  Lysobacter sp. OAE881 ABIE51_RS16150 EAL domain-containing protein insig. 35 55
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2238 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 41 45
  Shewanella loihica PV-4 Shew_0306 diguanylate cyclase/phosphodiesterase with GAF sensor (RefSeq) cofit 41 47
  Shewanella amazonensis SB2B Sama_2448 sensory box protein (RefSeq) insig. 40 48
  Pseudomonas fluorescens FW300-N2C3 AO356_23455 diguanylate cyclase insig. 38 55
  Dechlorosoma suillum PS Dsui_3108 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 51
  Paraburkholderia sabiae LMG 24235 QEN71_RS30355 bifunctional diguanylate cyclase/phosphodiesterase insig. 41 47
  Ralstonia solanacearum PSI07 RPSI07_RS21500 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 55
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 38 49
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 36 47
  Pectobacterium carotovorum WPP14 HER17_RS11575 EAL domain-containing protein cofit 27 95
  Escherichia coli ECOR27 NOLOHH_15605 dgcE diguanylate cyclase cofit 41 46
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3859 FIG00509877: hypothetical protein insig. 40 47
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4156 GGDEF domain protein insig. 40 48
  Herbaspirillum seropedicae SmR1 HSERO_RS01405 diguanylate cyclase insig. 39 47
  Pseudomonas sp. RS175 PFR28_01072 hypothetical protein sig. 38 47
  Escherichia fergusonii Becca EFB2_01787 putative diguanylate cyclase DgcE insig. 42 46
  Escherichia coli ECOR38 HEPCGN_02965 mASE1 diguanylate cyclase cofit 42 46
  Escherichia coli Nissle 1917 ECOLIN_RS12165 diguanylate cyclase cofit 42 46
  Enterobacter asburiae PDN3 EX28DRAFT_0487 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 41 46
  Pseudomonas fluorescens FW300-N2E3 AO353_10960 hypothetical protein insig. 41 45
  Vibrio cholerae E7946 ATCC 55056 CSW01_18925 sensor domain-containing diguanylate cyclase insig. 37 53
  Dechlorosoma suillum PS Dsui_1824 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 47
  Escherichia coli ECRC101 OKFHMN_24260 mASE1 diguanylate cyclase insig. 41 46
  Escherichia coli ECRC101 MCAODC_20680 mASE1 diguanylate cyclase insig. 41 46
  Escherichia coli ECRC102 NIAGMN_22205 mASE1 diguanylate cyclase insig. 41 46
  Escherichia coli ECRC62 BNILDI_14510 dgcE diguanylate cyclase insig. 41 46
  Escherichia coli ECRC98 JDDGAC_28370 mASE1 diguanylate cyclase no data 41 46
  Escherichia coli ECRC99 KEDOAH_03890 mASE1 diguanylate cyclase no data 41 46
  Escherichia coli BW25113 b2067 yegE predicted diguanylate cyclase, GGDEF domain signalling protein (NCBI) sig. 41 46
  Pseudomonas putida KT2440 PP_1411 GGDEF domain protein insig. 40 49
  Shewanella amazonensis SB2B Sama_1844 extracellular solute-binding protein (RefSeq) cofit 40 47
  Variovorax sp. SCN45 GFF1363 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 46
  Agrobacterium fabrum C58 Atu1112 hypothetical protein insig. 39 45
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1600 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 55
  Acidovorax sp. GW101-3H11 Ac3H11_2327 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 59
  Herbaspirillum seropedicae SmR1 HSERO_RS08500 hypothetical protein insig. 37 49
  Pseudomonas sp. S08-1 OH686_06280 Sensory box/GGDEF family protein insig. 37 53
  Acidovorax sp. GW101-3H11 Ac3H11_3675 diguanylate cyclase with PAS/PAC sensor insig. 37 51
  Rhizobium sp. OAE497 ABIE40_RS02110 GGDEF domain-containing protein insig. 36 73
  Synechococcus elongatus PCC 7942 Synpcc7942_1158 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 34 53
  Sinorhizobium meliloti 1021 SM_b20447 hypothetical protein insig. 34 57
  Shewanella oneidensis MR-1 SO4324 GGDEF domain protein (NCBI ptt file) insig. 39 50
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18400 sensor domain-containing diguanylate cyclase cofit 35 60
  Acidovorax sp. GW101-3H11 Ac3H11_3877 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 50
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 37 54
  Pseudomonas putida KT2440 PP_3182 GGDEF domain protein insig. 33 54
  Enterobacter sp. TBS_079 MPMX20_03049 putative diguanylate cyclase DgcE sig. 40 46
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18930 EAL domain-containing protein insig. 34 55
  Rhodanobacter denitrificans MT42 LRK55_RS05220 EAL domain-containing protein insig. 34 55
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05445 EAL domain-containing protein insig. 34 55