| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Bacteroides thetaiotaomicron VPI-5482 | BT0156 | | transcriptional regulator (NCBI ptt file) | cofit | 100 | 100 |
| o | Bacteroides ovatus ATCC 8483 | BACOVA_01281 | | transcriptional regulator, LuxR family | insig. | 90 | 100 |
| o | Bacteroides stercoris CC31F | HMPREF1181_RS05280 | | response regulator transcription factor | insig. | 82 | 100 |
| o | Phocaeicola dorei CL03T12C01 | ABI39_RS02195 | | response regulator transcription factor | insig. | 50 | 100 |
| o | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS02885 | | response regulator transcription factor | strong | 50 | 100 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05544 | | transcriptional regulator, LuxR family | insig. | 47 | 99 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10600 | | DNA-binding response regulator | strong | 29 | 97 |
| o | Ralstonia solanacearum UW163 | UW163_RS02980 | | DNA-binding response regulator | strong | 29 | 97 |
| o | Ralstonia solanacearum GMI1000 | RS_RS01435 | | DNA-binding response regulator | strong | 29 | 97 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS22720 | | DNA-binding response regulator | strong | 29 | 97 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS06400 | | response regulator transcription factor | strong | 29 | 97 |
| o | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_01935 | | DNA-binding response regulator | sig. | 31 | 96 |
| o | Dinoroseobacter shibae DFL-12 | Dshi_2345 | | two component transcriptional regulator, LuxR family (RefSeq) | insig. | 29 | 95 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS00785 | | LuxR family transcriptional regulator | insig. | 28 | 97 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_c20200 | | two-component signal transduction system, response regulator | strong | 27 | 95 |
| o | Pseudomonas putida KT2440 | PP_2126 | | DNA-binding response regulator, LuxR family | insig. | 26 | 96 |
| o | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_1897 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | strong | 31 | 91 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS12850 | | LuxR family transcriptional regulator | strong | 29 | 95 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2789 | | DNA-binding response regulator, LuxR family | insig. | 27 | 95 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS30900 | | transcriptional regulator | sig. | 29 | 97 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_02965 | | LuxR family transcriptional regulator | insig. | 28 | 96 |
| o | Kangiella aquimarina DSM 16071 | B158DRAFT_1737 | | two component transcriptional regulator, LuxR family | insig. | 27 | 95 |
| o | Pseudomonas sp. RS175 | PFR28_01009 | | Transcriptional regulatory protein DegU | insig. | 28 | 96 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS05525 | | response regulator transcription factor | insig. | 28 | 97 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_19270 | | LuxR family transcriptional regulator | strong | 26 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00410 | | two component transcriptional regulator, LuxR family | insig. | 28 | 97 |
| o | Pseudomonas sp. S08-1 | OH686_21830 | | Two-component transcriptional response regulator, NarL/FixJ family | insig. | 26 | 95 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS13150 | | hisitidine kinase | no data | 28 | 97 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2418 | | DNA-binding response regulator, LuxR family | insig. | 29 | 96 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03107 | | two component transcriptional regulator, LuxR family | no data | 29 | 97 |
| o | Lysobacter sp. OAE881 | ABIE51_RS10620 | | response regulator transcription factor | insig. | 26 | 96 |
| o | Pseudomonas stutzeri RCH2 | Psest_0662 | | Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 25 | 95 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2277 | | DNA-binding response regulator, LuxR family | insig. | 27 | 95 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS21600 | | response regulator transcription factor | insig. | 26 | 97 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21600 | | response regulator transcription factor | sig. | 26 | 97 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_06455 | | DNA-binding response regulator | insig. | 22 | 95 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004191 | | DNA-binding NarL/FixJ family response regulator | strong | 28 | 97 |
| o | Pseudomonas simiae WCS417 | PS417_19630 | | LuxR family transcriptional regulator | cofit | 25 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30895 | | response regulator transcription factor | insig. | 27 | 89 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5052 | | Two-component response regulator | no data | 27 | 95 |
| o | Mycobacterium tuberculosis H37Rv | Rv0844c | | Possible nitrate/nitrite response transcriptional regulatory protein NarL | insig. | 29 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS20525 | | LuxR family transcriptional regulator | cofit | 26 | 94 |
| | Ralstonia solanacearum GMI1000 | RS_RS00100 | | DNA-binding response regulator | strong | 27 | 94 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS14195 | | response regulator transcription factor | no data | 27 | 97 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS14480 | | response regulator transcription factor | strong | 27 | 97 |
| o | Klebsiella michiganensis M5al | BWI76_RS18335 | | DNA-binding response regulator | strong | 25 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32080 | | response regulator transcription factor | insig. | 27 | 97 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4454 | | Transcriptional regulator of fimbriae expression FimZ (LuxR/UhpA family) | insig. | 29 | 92 |
| o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2612.1 | | BarA-associated response regulator UvrY (= GacA = SirA) | insig. | 27 | 98 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | no data | 25 | 95 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1940 | | regulatory protein, LuxR:Response regulator receiver | no data | 25 | 95 |
| | Lysobacter sp. OAE881 | ABIE51_RS16750 | | response regulator transcription factor | cofit | 27 | 93 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS21335 | | response regulator transcription factor | sig. | 27 | 97 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS09500 | | DNA-binding response regulator | insig. | 27 | 94 |
| | Ralstonia solanacearum UW163 | UW163_RS04080 | | DNA-binding response regulator | insig. | 27 | 94 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS18540 | | DNA-binding response regulator | cofit | 24 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_29835 | | LuxR family transcriptional regulator | insig. | 24 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS10190 | | LuxR family transcriptional regulator | insig. | 24 | 95 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1472 | | Regulatory protein, LuxR:Response regulator receiver | insig. | 28 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS10275 | | LuxR family transcriptional regulator | sig. | 27 | 95 |
| o | Dechlorosoma suillum PS | Dsui_1862 | | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain | insig. | 26 | 95 |
| | Pseudomonas sp. RS175 | PFR28_01435 | | Response regulator UvrY | insig. | 24 | 97 |
| o | Escherichia coli ECOR27 | NOLOHH_00760 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | no data | 28 | 92 |
| o | Escherichia coli ECOR38 | HEPCGN_06415 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | cofit | 28 | 92 |
| o | Escherichia coli ECRC101 | OKFHMN_07775 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | no data | 28 | 92 |
| o | Escherichia coli ECRC101 | MCAODC_26995 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | insig. | 28 | 92 |
| o | Escherichia coli ECRC102 | NIAGMN_05830 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | no data | 28 | 92 |
| o | Escherichia coli ECRC62 | BNILDI_22195 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | insig. | 28 | 92 |
| o | Escherichia coli ECRC98 | JDDGAC_11425 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | no data | 28 | 92 |
| o | Escherichia coli ECRC99 | KEDOAH_20195 | fimZ | fimbria biosynthesis transcriptional regulator FimZ | no data | 28 | 92 |
| o | Escherichia coli BW25113 | b0535 | fimZ | predicted DNA-binding transcriptional regulator (NCBI) | sig. | 28 | 92 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3581 | | Secretion system regulator of DegU/UvrY/BvgA type | insig. | 28 | 97 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1774 | | DNA-binding response regulator, LuxR family, near polyamine transporter | insig. | 25 | 97 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS42425 | | response regulator transcription factor | insig. | 25 | 97 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09180 | | DNA-binding response regulator | insig. | 28 | 97 |
| o | Variovorax sp. OAS795 | ABID97_RS12700 | | response regulator transcription factor | insig. | 27 | 96 |
| o | Escherichia coli BL21 | ECD_00485 | | response regulator family protein | no data | 28 | 92 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03146 | | Virulence factors putative positive transcription regulator BvgA | insig. | 28 | 92 |
| | Ralstonia solanacearum GMI1000 | RS_RS11600 | | DNA-binding response regulator | insig. | 26 | 95 |
| | Lysobacter sp. OAE881 | ABIE51_RS10320 | | response regulator transcription factor | insig. | 22 | 95 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2577 | | DNA-binding response regulator, LuxR family (TIGR) | strong | 25 | 95 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS11330 | | response regulator transcription factor | insig. | 24 | 95 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS11600 | | response regulator transcription factor | insig. | 24 | 95 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS06830 | | DNA-binding response regulator | insig. | 25 | 95 |
| o | Serratia liquefaciens MT49 | IAI46_18680 | | two-component system response regulator NarL | insig. | 29 | 93 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS05230 | | response regulator transcription factor | insig. | 27 | 94 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03153 | | two component transcriptional regulator, LuxR family | insig. | 26 | 93 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_232 | | DNA-binding response regulator, LuxR family | insig. | 26 | 85 |
| o | Shewanella sp. ANA-3 | Shewana3_1608 | | response regulator (RefSeq) | strong | 24 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS08760 | | XRE family transcriptional regulator | no data | 25 | 95 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18190 | | response regulator transcription factor | strong | 26 | 90 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32890 | | response regulator transcription factor | insig. | 26 | 93 |
| | Pseudomonas putida KT2440 | PP_0410 | | DNA-binding response regulator UhpA | strong | 25 | 95 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS23850 | | DNA-binding response regulator | cofit | 26 | 94 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06015 | | hisitidine kinase | strong | 25 | 97 |
| o | Shewanella oneidensis MR-1 | SO1860 | | DNA-binding response regulator, LuxR family (NCBI ptt file) | strong | 24 | 97 |
| o | Rhodanobacter sp. FW510-T8 | OKGIIK_03330 | citB | DNA-binding response regulator | cofit | 27 | 97 |
| o | Dickeya dianthicola 67-19 | HGI48_RS02840 | | transcriptional regulator UhpA | insig. | 29 | 87 |
| | Lysobacter sp. OAE881 | ABIE51_RS10325 | | response regulator transcription factor | insig. | 24 | 94 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1296 | | DNA-binding response regulator, LuxR family | strong | 25 | 95 |