Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0621 | | sigma-54 dependent DNA-binding response regulator (TIGR) | insig. | 100 | 100 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1493 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 65 | 83 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2536 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 48 | 98 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0804 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | insig. | 45 | 99 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3023 | atoC | sigma-54 dependent DNA-binding response regulator (TIGR) | no data | 43 | 98 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1859 | | putative two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | sig. | 42 | 99 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2644 | | putative two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 51 | 83 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0653 | atoC | sigma-54 dependent transcriptional regulator, putative/response regulator (TIGR) | sig. | 52 | 83 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2843 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | cofit | 48 | 83 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_3072 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | cofit | 44 | 84 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0699 | | putative two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | cofit | 36 | 99 |
| Pseudomonas simiae WCS417 | PS417_05525 | | Fis family transcriptional regulator | strong | 37 | 99 |
| Klebsiella michiganensis M5al | BWI76_RS01605 | | transcriptional regulatory protein ZraR | insig. | 39 | 96 |
| Pseudomonas fluorescens SBW25 | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 37 | 99 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 37 | 99 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU1419 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | sig. | 37 | 99 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09510 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 34 | 98 |
| Variovorax sp. SCN45 | GFF3669 | | Two-component system response regulator protein | no data | 43 | 78 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_16225 | | Fis family transcriptional regulator | insig. | 36 | 99 |
| Dechlorosoma suillum PS | Dsui_3286 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 43 | 77 |
| Azospirillum sp. SherDot2 | MPMX19_03461 | | Regulatory protein AtoC | insig. | 36 | 98 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_07640 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 36 | 96 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS23170 | | ATPase AAA | insig. | 38 | 100 |
| Bacteroides stercoris CC31F | HMPREF1181_RS03655 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 33 | 99 |
| Parabacteroides merdae CL09T00C40 | HMPREF1078_RS14380 | | sigma-54 dependent transcriptional regulator | insig. | 37 | 82 |
| Dechlorosoma suillum PS | Dsui_2360 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 36 | 99 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU2934 | ntrX | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 38 | 89 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0700 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 37 | 99 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0215 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 39 | 82 |
| Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS04160 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 37 | 82 |
| Bacteroides thetaiotaomicron VPI-5482 | BT2433 | | two-component system response regulator (NCBI ptt file) | sig. | 36 | 83 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0539 | | sigma-54 dependent DNA-binding response regulator (TIGR) | sig. | 35 | 99 |
| Marinobacter adhaerens HP15 | HP15_2011 | | two component, sigma54 specific, transcriptional regulator, Fis family | insig. | 39 | 82 |
| Escherichia coli Nissle 1917 | ECOLIN_RS23090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 37 | 96 |
| Phocaeicola dorei CL03T12C01 | ABI39_RS17060 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 36 | 83 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_10980 | | chemotaxis protein CheY | insig. | 41 | 78 |
| Escherichia coli ECOR38 | HEPCGN_11960 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 37 | 96 |
| Ralstonia solanacearum GMI1000 | RS_RS25105 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 35 | 99 |
| Escherichia fergusonii Becca | EFB2_04606 | | Transcriptional regulatory protein ZraR | insig. | 37 | 96 |
| Escherichia coli ECRC62 | BNILDI_06055 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 37 | 96 |
| Bacteroides ovatus ATCC 8483 | BACOVA_01571 | | Sigma-54 interaction domain protein | insig. | 36 | 83 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1461 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 36 | 99 |
| Ralstonia solanacearum PSI07 | RPSI07_RS07835 | | sigma-54-dependent Fis family transcriptional regulator | strong | 34 | 100 |
| Escherichia coli BW25113 | b4004 | zraR | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) | insig. | 37 | 96 |
| Marinobacter adhaerens HP15 | HP15_328 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 35 | 99 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05020 | | sigma-54 dependent transcriptional regulator | strong | 35 | 98 |
| Escherichia coli BL21 | ECD_03881 | | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | insig. | 37 | 96 |
| Pseudomonas sp. S08-1 | OH686_12145 | | Alginate biosynthesis two-component system response regulator AlgB | cofit | 41 | 78 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS09115 | | sigma-54 dependent transcriptional regulator | insig. | 36 | 98 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2601 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 35 | 99 |
| Rhodanobacter denitrificans MT42 | LRK55_RS04800 | | sigma-54 dependent transcriptional regulator | cofit | 35 | 98 |
| Alteromonas macleodii MIT1002 | MIT1002_01326 | | Quorum-sensing regulator protein F | insig. | 37 | 98 |
| Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | cofit | 33 | 99 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30045 | | ATPase AAA | insig. | 38 | 97 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3220 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 37 | 98 |
| Escherichia coli ECOR27 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 37 | 96 |
| Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | cofit | 33 | 99 |
| Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 33 | 99 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 33 | 99 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 33 | 99 |
| Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 33 | 99 |
| Acinetobacter radioresistens SK82 | MPMX26_00162 | | Regulatory protein AtoC | cofit | 33 | 99 |
| Escherichia coli ECRC101 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 37 | 96 |
| Escherichia coli ECRC101 | MCAODC_03820 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 37 | 96 |
| Escherichia coli ECRC102 | NIAGMN_11070 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 37 | 96 |
| Escherichia coli ECRC99 | KEDOAH_14840 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 37 | 96 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS23315 | | sigma-54-dependent Fis family transcriptional regulator | strong | 34 | 99 |
| Ralstonia solanacearum UW163 | UW163_RS16565 | | sigma-54-dependent Fis family transcriptional regulator | strong | 34 | 99 |
| Azospirillum sp. SherDot2 | MPMX19_03494 | | Regulatory protein AtoC | insig. | 41 | 77 |
| Shewanella oneidensis MR-1 | SO4718 | | sigma-54 dependent response regulator (NCBI ptt file) | sig. | 35 | 96 |
| Shewanella loihica PV-4 | Shew_3682 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 35 | 96 |
| Pseudomonas stutzeri RCH2 | Psest_0192 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 41 | 78 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04045 | | Transcriptional regulatory protein ZraR | insig. | 37 | 96 |
| Pseudomonas sp. RS175 | PFR28_04634 | | Alginate biosynthesis transcriptional regulatory protein AlgB | strong | 40 | 78 |
| Paraburkholderia graminis OAS925 | ABIE53_001365 | | DNA-binding NtrC family response regulator | strong | 36 | 99 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_01730 | atoC | sigma-54-dependent Fis family transcriptional regulator | insig. | 35 | 98 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_11415 | | chemotaxis protein CheY | strong | 40 | 78 |
| Marinobacter adhaerens HP15 | HP15_523 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 39 | 79 |
| Escherichia coli ECRC98 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 37 | 96 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS23515 | | sigma-54 dependent transcriptional regulator | strong | 35 | 99 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS10015 | | sigma-54 dependent transcriptional regulator | sig. | 33 | 99 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2200 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 39 | 82 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS11070 | | sigma-54 dependent transcriptional regulator | cofit | 35 | 98 |
| Pseudomonas stutzeri RCH2 | Psest_3911 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 39 | 79 |
| Klebsiella michiganensis M5al | BWI76_RS21250 | | two-component system response regulator GlrR | sig. | 35 | 99 |
| Pseudomonas putida KT2440 | PP_0133 | | Alginate biosynthesis transcriptional regulatory protein AlgB | sig. | 40 | 78 |
| Rhodopseudomonas palustris CGA009 | TX73_021705 | | sigma-54 dependent transcriptional regulator | sig. | 40 | 79 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4152 | | alginate biosynthesis transcriptional regulatory protein AlgB | strong | 40 | 78 |
| Pseudomonas simiae WCS417 | PS417_00450 | | chemotaxis protein CheY | strong | 39 | 78 |
| Shewanella sp. ANA-3 | Shewana3_4076 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | cofit | 35 | 96 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_584 | | alginate biosynthesis transcriptional regulatory protein AlgB | sig. | 39 | 78 |
| Azospirillum brasilense Sp245 | AZOBR_RS14430 | | chemotaxis protein CheY | strong | 36 | 90 |
| Variovorax sp. SCN45 | GFF4432 | | Two-component system response regulator protein | strong | 38 | 78 |
| Pseudomonas fluorescens SBW25 | PFLU_RS00440 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 40 | 78 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS00440 | | sigma-54-dependent Fis family transcriptional regulator | strong | 40 | 78 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1885 | | alginate biosynthesis transcriptional regulatory protein AlgB | sig. | 39 | 78 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_0332 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 35 | 98 |
| Shewanella amazonensis SB2B | Sama_0125 | | response regulator receiver protein (RefSeq) | strong | 35 | 96 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS12650 | | sigma-54 dependent transcriptional regulator | insig. | 37 | 81 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2149 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 36 | 99 |