Homologs of SOA0044 from Shewanella oneidensis MR-1

site-specific recombinase, phage integrase family (NCBI ptt file)
SEED: phage integrase family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SOA0044 site-specific recombinase, phage integrase family (NCBI ptt file) insig. 100 100
o Dinoroseobacter shibae DFL-12 Dshi_0395 integrase family protein (RefSeq) insig. 35 97
o Azospirillum brasilense Sp245 AZOBR_RS24420 integrase insig. 36 93
o Phaeobacter inhibens DSM 17395 PGA1_c00260 putative phage integrase, catalytic core insig. 34 96
  Shewanella oneidensis MR-1 SO_A0045 site-specific recombinase, phage integrase family (NCBI) insig. 30 99
  Dinoroseobacter shibae DFL-12 Dshi_3213 integrase family protein (RefSeq) insig. 31 98
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11865 tyrosine-type recombinase/integrase insig. 30 99
  Azospirillum brasilense Sp245 AZOBR_RS30360 integrase insig. 29 93
o Shewanella sp. ANA-3 Shewana3_1244 phage integrase family protein (RefSeq) insig. 26 98
o Ralstonia solanacearum GMI1000 RS_RS13140 DUF4102 domain-containing protein insig. 24 98
o Castellaniella sp019104865 MT123 ABCV34_RS15835 site-specific integrase insig. 24 98
o Variovorax sp. SCN45 GFF7326 Integrase insig. 24 98
  Dickeya dianthicola 67-19 HGI48_RS04125 tyrosine-type recombinase/integrase insig. 24 98
  Variovorax sp. SCN45 GFF4896 Integrase insig. 24 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4150 Integrase insig. 24 99
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2604 Site-specific recombinase XerD insig. 26 98
o Magnetospirillum magneticum AMB-1 AMB_RS20435 DUF4102 domain-containing protein insig. 24 97
  Azospirillum sp. SherDot2 MPMX19_02360 Prophage integrase IntA cofit 25 91
  Klebsiella michiganensis M5al BWI76_RS12025 integrase insig. 25 89
  Magnetospirillum magneticum AMB-1 AMB_RS08750 site-specific integrase insig. 29 51
  Ralstonia solanacearum PSI07 RPSI07_RS12430 DUF4102 domain-containing protein insig. 25 86
  Pseudomonas stutzeri RCH2 Psest_1102 Integrase insig. 22 83
  Ralstonia solanacearum GMI1000 RS_RS12480 DUF4102 domain-containing protein insig. 23 90
  Castellaniella sp019104865 MT123 ABCV34_RS11900 tyrosine-type recombinase/integrase insig. 22 83
  Ralstonia solanacearum UW163 UW163_RS08775 integrase insig. 22 86
  Rhodanobacter denitrificans MT42 LRK55_RS00045 site-specific integrase insig. 28 54
  Lysobacter sp. OAE881 ABIE51_RS07380 site-specific integrase strong 26 65
  Escherichia fergusonii Becca EFB2_00168 Prophage integrase IntA insig. 24 59
  Ralstonia solanacearum GMI1000 RS_RS08345 site-specific integrase insig. 27 61
  Rhodanobacter sp. FW510-T8 OKGIIK_08945 Integrase insig. 26 58
  Sinorhizobium meliloti 1021 SMc02397 integrase insig. 24 72
  Escherichia coli ECRC62 BNILDI_11500 xerD integrase insig. 31 48
  Ralstonia solanacearum GMI1000 RS_RS07820 site-specific integrase insig. 27 63
  Methanococcus maripaludis JJ MMJJ_RS04325 tyrosine-type recombinase/integrase insig. 26 57
  Magnetospirillum magneticum AMB-1 AMB_RS03365 site-specific integrase insig. 24 92
  Rahnella sp. WP5 EX31_RS20945 tyrosine-type recombinase/integrase insig. 22 83
  Serratia liquefaciens MT49 IAI46_15305 integrase arm-type DNA-binding domain-containing protein insig. 23 84
  Methanococcus maripaludis S2 MMP_RS03885 tyrosine-type recombinase/integrase insig. 22 76
  Dickeya dadantii 3937 DDA3937_RS04115 site-specific integrase insig. 30 48
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03395 Tyrosine recombinase XerC insig. 27 59
  Dickeya dianthicola ME23 DZA65_RS04005 site-specific integrase insig. 30 48
  Alteromonas macleodii MIT1002 MIT1002_04073 Putative prophage CPS-53 integrase insig. 23 83
  Shewanella loihica PV-4 Shew_0995 phage integrase family protein (RefSeq) insig. 22 71
  Magnetospirillum magneticum AMB-1 AMB_RS24300 DUF4102 domain-containing protein cofit 21 99
  Shewanella amazonensis SB2B Sama_0318 hypothetical protein (RefSeq) insig. 23 66
  Dickeya dianthicola 67-19 HGI48_RS05235 tyrosine-type recombinase/integrase insig. 30 56
  Marinobacter adhaerens HP15 HP15_703 phage integrase insig. 25 65
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01966 Site-specific recombinase XerD insig. 27 56
  Escherichia coli BW25113 b0281 intF CP4-6 prophage; predicted phage integrase (NCBI) insig. 22 88
  Dickeya dadantii 3937 DDA3937_RS16520 tyrosine-type recombinase/integrase insig. 20 90
  Desulfovibrio vulgaris Hildenborough JW710 DVU1757 site-specific recombinase, phage integrase family (TIGR) insig. 25 66
  Erwinia tracheiphila SCR3 LU632_RS06490 site-specific integrase insig. 30 56
  Burkholderia phytofirmans PsJN BPHYT_RS35970 DNA recombinase insig. 27 64
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 30 36
  Mycobacterium tuberculosis H37Rv Rv2659c Probable PhiRv2 prophage integrase insig. 24 71
  Escherichia coli ECRC62 BNILDI_08820 integrase insig. 25 69
  Escherichia coli ECOR38 HEPCGN_04445 xerD integrase cofit 27 49
  Escherichia coli ECRC101 OKFHMN_26010 xerD integrase insig. 27 49
  Escherichia coli ECRC101 MCAODC_19380 xerD integrase insig. 27 49
  Escherichia coli ECRC102 NIAGMN_02040 xerD integrase insig. 27 49
  Escherichia coli ECRC98 JDDGAC_00600 xerD integrase no data 27 49
  Escherichia coli ECRC99 KEDOAH_02080 xerD integrase no data 27 49
  Pectobacterium carotovorum WPP14 HER17_RS04720 tyrosine-type recombinase/integrase insig. 22 77
  Pseudomonas putida KT2440 PP_2297 putative integrative genetic element Ppu40, integrase insig. 24 64
  Cupriavidus basilensis FW507-4G11 RR42_RS08460 integrase insig. 30 56
  Escherichia coli ECOR38 HEPCGN_03620 xerD integrase cofit 25 39
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_4439 Site-specific recombinase XerD insig. 24 33
  Magnetospirillum magneticum AMB-1 AMB_RS18470 site-specific integrase insig. 26 73
  Pectobacterium carotovorum WPP14 HER17_RS07965 tyrosine-type recombinase/integrase insig. 29 47
  Pseudomonas sp. S08-1 OH686_07985 Phage integrase cofit 27 47
  Alteromonas macleodii MIT1002 MIT1002_03388 integrase insig. 26 41
  Dickeya dianthicola 67-19 HGI48_RS08260 tyrosine-type recombinase/integrase insig. 24 53
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3452.1 phage-related integrase insig. 23 77
  Pseudomonas sp. S08-1 OH686_21775 Phage integrase insig. 27 48
  Pantoea sp. MT58 IAI47_02995 tyrosine-type recombinase/integrase insig. 26 49
  Methanococcus maripaludis S2 MMP_RS02510 site-specific integrase sig. 26 57
  Marinobacter adhaerens HP15 HP15_1081 phage integrase family protein insig. 23 84
  Escherichia coli ECRC101 MCAODC_20995 int Integrase insig. 26 56
  Variovorax sp. OAS795 ABID97_RS09560 tyrosine-type recombinase/integrase insig. 22 67
  Bosea sp. OAE506 ABIE41_RS00515 tyrosine-type recombinase/integrase insig. 29 37
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS13870 site-specific integrase insig. 26 44
  Rahnella sp. WP5 EX31_RS14515 site-specific integrase insig. 23 56
  Escherichia coli ECOR27 NOLOHH_23070 int Integrase cofit 27 42
  Escherichia coli ECRC101 MCAODC_25865 int Integrase insig. 27 42
  Escherichia coli ECRC99 KEDOAH_21320 int Integrase no data 27 42
  Agrobacterium fabrum C58 Atu1194 phage-related integrase insig. 24 66
  Escherichia coli ECRC101 OKFHMN_09385 fimB integrase insig. 21 77
  Escherichia coli ECRC102 NIAGMN_07435 fimB integrase insig. 21 77
  Escherichia coli ECRC98 JDDGAC_13020 fimB integrase no data 21 77
  Ralstonia sp. UNC404CL21Col ABZR87_RS13170 site-specific integrase insig. 27 61
  Desulfovibrio vulgaris Hildenborough JW710 DVU2197 site-specific recombinase, phage integrase family (TIGR) insig. 25 69
  Marinobacter adhaerens HP15 HP15_3093 phage integrase family protein insig. 24 45
  Klebsiella michiganensis M5al BWI76_RS05825 putative site specific integrase insig. 21 81
  Magnetospirillum magneticum AMB-1 AMB_RS04635 site-specific integrase cofit 28 34
  Alteromonas macleodii MIT1002 MIT1002_03221 Tyrosine recombinase XerC insig. 26 39
  Dechlorosoma suillum PS Dsui_1127 site-specific recombinase XerD cofit 25 65
  Pseudomonas syringae pv. syringae B728a Psyr_2846 Phage integrase:Phage integrase, N-terminal SAM-like protein sig. 24 69
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2846 Phage integrase:Phage integrase, N-terminal SAM-like protein sig. 24 69
  Pseudomonas fluorescens SBW25 PFLU_RS07815 site-specific integrase insig. 23 44
  Pseudomonas fluorescens SBW25-INTG PFLU_RS07815 site-specific integrase insig. 23 44