Homologs of SO3759 from Shewanella oneidensis MR-1

GGDEF domain protein (NCBI ptt file)
SEED: Diguanylate cyclase with GAF sensor

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3759 GGDEF domain protein (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_0833 diguanylate cyclase with GAF sensor (RefSeq) cofit 80 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS25945 sensor domain-containing diguanylate cyclase insig. 53 97
o Shewanella amazonensis SB2B Sama_1949 diguanylate cyclase, putative (RefSeq) insig. 53 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04383 diguanylate cyclase with GAF sensor insig. 55 97
o Cupriavidus basilensis FW507-4G11 RR42_RS29290 diguanylate cyclase insig. 51 99
o Paraburkholderia graminis OAS925 ABIE53_003022 diguanylate cyclase (GGDEF)-like protein insig. 53 97
o Herbaspirillum seropedicae SmR1 HSERO_RS18375 diguanylate cyclase sig. 49 97
o Pantoea sp. MT58 IAI47_01420 sensor domain-containing diguanylate cyclase insig. 49 99
o Pseudomonas fluorescens FW300-N2C3 AO356_24440 diguanylate cyclase insig. 48 98
o Pseudomonas sp. RS175 PFR28_02365 hypothetical protein insig. 48 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_576 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 48 97
o Burkholderia phytofirmans PsJN BPHYT_RS14290 diguanylate cyclase insig. 53 90
o Klebsiella michiganensis M5al BWI76_RS13230 GGDEF domain-containing protein no data 45 98
o Enterobacter asburiae PDN3 EX28DRAFT_1193 diguanylate cyclase (GGDEF) domain cofit 42 98
o Enterobacter sp. TBS_079 MPMX20_02274 hypothetical protein sig. 41 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS18625 sensor domain-containing diguanylate cyclase insig. 40 97
o Pseudomonas sp. S08-1 OH686_07535 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 39 97
  Rhizobium sp. OAE497 ABIE40_RS08030 sensor domain-containing diguanylate cyclase insig. 37 94
o Pseudomonas putida KT2440 PP_2505 GAF domain/GGDEF domain protein insig. 35 97
o Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 33 96
  Alteromonas macleodii MIT1002 MIT1002_02202 Cyclic di-GMP phosphodiesterase Gmr insig. 50 51
  Rhizobium sp. OAE497 ABIE40_RS02550 sensor domain-containing diguanylate cyclase insig. 31 97
  Azospirillum sp. SherDot2 MPMX19_04031 hypothetical protein insig. 46 54
  Alteromonas macleodii MIT1002 MIT1002_02990 Aerobic respiration control sensor protein ArcB cofit 48 49
  Marinobacter adhaerens HP15 HP15_3728 sensory box/GGDEF/GAF/EAL domain protein insig. 36 76
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1772 FOG: GGDEF domain insig. 52 49
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2240.1 Diguanylate cyclase (GGDEF domain) with GAF sensor insig. 35 82
  Pseudomonas stutzeri RCH2 Psest_4297 PAS domain S-box sig. 53 47
  Azospirillum sp. SherDot2 MPMX19_06088 Sensor histidine kinase RcsC insig. 52 47
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2395 FOG: GGDEF domain insig. 50 49
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4719.1 Diguanylate cyclase (GGDEF domain) with GAF sensor insig. 47 47
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3043.1 hypothetical protein insig. 34 88
  Synechococcus elongatus PCC 7942 Synpcc7942_1643 diguanylate cyclase with GAF sensor insig. 50 46
  Rahnella sp. WP5 EX31_RS13715 diguanylate cyclase insig. 44 50
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2699 sensor histidine kinase insig. 41 58
  Pseudomonas syringae pv. syringae B728a Psyr_3329 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 43 54
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3329 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 43 54
  Dickeya dadantii 3937 DDA3937_RS11465 EAL domain-containing protein strong 37 68
  Dickeya dianthicola 67-19 HGI48_RS11510 EAL domain-containing protein cofit 38 62
  Herbaspirillum seropedicae SmR1 HSERO_RS01405 diguanylate cyclase insig. 34 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_01515 hypothetical protein insig. 45 45
  Sinorhizobium meliloti 1021 SM_b20389 hypothetical protein insig. 30 76
  Cupriavidus basilensis FW507-4G11 RR42_RS26215 diguanylate cyclase no data 31 91
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4828 Sensor histidine kinase insig. 40 48
  Dickeya dianthicola ME23 DZA65_RS11845 EAL domain-containing protein cofit 38 62
  Shewanella sp. ANA-3 Shewana3_4330 diguanylate cyclase with GAF sensor (RefSeq) insig. 32 94
  Alteromonas macleodii MIT1002 MIT1002_01327 putative periplasmic ligand-binding sensor domain protein insig. 45 47
  Pseudomonas syringae pv. syringae B728a Psyr_3060 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal insig. 43 47
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3060 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal insig. 43 47
o Lysobacter sp. OAE881 ABIE51_RS04020 sensor domain-containing diguanylate cyclase insig. 29 95
  Pseudomonas fluorescens SBW25 PFLU_RS26810 GAF domain-containing protein insig. 42 50
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26810 GAF domain-containing protein insig. 42 50
  Agrobacterium fabrum C58 Atu1112 hypothetical protein insig. 28 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02694 DNA binding domain-containing protein, excisionase family sig. 45 45
  Bosea sp. OAE506 ABIE41_RS00530 GAF domain-containing protein insig. 44 45
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00329 DNA binding domain-containing protein, excisionase family insig. 45 45
  Herbaspirillum seropedicae SmR1 HSERO_RS06845 phosphodiesterase insig. 43 53
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00645 PAS domain-containing protein insig. 44 45
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS00665 PAS domain-containing protein insig. 43 46
  Azospirillum sp. SherDot2 MPMX19_04032 hypothetical protein insig. 41 49
  Shewanella amazonensis SB2B Sama_1202 GGDEF domain-containing protein (RefSeq) insig. 32 74
  Pseudomonas fluorescens SBW25 PFLU_RS12290 GAF domain-containing protein insig. 43 43
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12290 GAF domain-containing protein insig. 43 43
  Variovorax sp. SCN45 GFF1120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 45 42
  Pseudomonas syringae pv. syringae B728a Psyr_4221 diguanylate cyclase/phosphodiesterase insig. 36 57
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4221 diguanylate cyclase/phosphodiesterase insig. 36 57
  Pectobacterium carotovorum WPP14 HER17_RS11575 EAL domain-containing protein cofit 36 62
  Acidovorax sp. GW101-3H11 Ac3H11_4997 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 41 48
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.816.1 histidine kinase/response regulator hybrid protein insig. 39 48
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5385.1 FIG01211599: hypothetical protein insig. 42 48
  Herbaspirillum seropedicae SmR1 HSERO_RS08510 phosphodiesterase insig. 40 59
  Caulobacter crescentus NA1000 CCNA_03066 GAF/PAS-family sensor histidine kinase insig. 39 47
  Caulobacter crescentus NA1000 Δfur CCNA_03066 GAF/PAS-family sensor histidine kinase cofit 39 47
  Rhodopseudomonas palustris CGA009 TX73_020770 HWE histidine kinase domain-containing protein insig. 42 48
  Dickeya dadantii 3937 DDA3937_RS12150 diguanylate cyclase insig. 39 45
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4586 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no data 38 52
  Shewanella loihica PV-4 Shew_3341 diguanylate cyclase with GAF sensor (RefSeq) insig. 32 78
  Pantoea sp. MT58 IAI47_21810 EAL domain-containing protein insig. 41 41
  Burkholderia phytofirmans PsJN BPHYT_RS10605 diguanylate cyclase insig. 27 90
  Dickeya dianthicola 67-19 HGI48_RS12245 diguanylate cyclase insig. 38 45
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1252.1 Sensor histidine kinase insig. 38 48
  Dickeya dianthicola ME23 DZA65_RS12695 diguanylate cyclase insig. 37 45
  Pseudomonas stutzeri RCH2 Psest_3216 diguanylate cyclase (GGDEF) domain strong 42 46
  Herbaspirillum seropedicae SmR1 HSERO_RS18880 diguanylate cyclase insig. 42 47
  Synechococcus elongatus PCC 7942 Synpcc7942_1811 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor sig. 40 47
  Vibrio cholerae E7946 ATCC 55056 CSW01_06895 diguanylate cyclase insig. 44 47
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3350 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 52
  Herbaspirillum seropedicae SmR1 HSERO_RS08430 diguanylate cyclase strong 42 39
  Pseudomonas putida KT2440 PP_1411 GGDEF domain protein insig. 43 48
  Rhizobium sp. OAE497 ABIE40_RS16800 GAF domain-containing protein insig. 40 45
  Pseudomonas sp. S08-1 OH686_16635 hypothetical protein insig. 39 57
  Pectobacterium carotovorum WPP14 HER17_RS14460 diguanylate cyclase AdrA cofit 38 52
  Bosea sp. OAE506 ABIE41_RS07120 EAL domain-containing protein insig. 36 50
  Pseudomonas sp. S08-1 OH686_06280 Sensory box/GGDEF family protein insig. 42 46
  Desulfovibrio vulgaris Miyazaki F DvMF_0509 diguanylate cyclase (RefSeq) insig. 40 46
  Shewanella loihica PV-4 Shew_2778 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 38 54
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 40 53
  Marinobacter adhaerens HP15 HP15_4052 response regulator insig. 39 46
  Herbaspirillum seropedicae SmR1 HSERO_RS04200 diguanylate cyclase insig. 32 83