Homologs of SO3102 from Shewanella oneidensis MR-1

AcrA/AcrE family protein (NCBI ptt file)
SEED: Membrane-fusion protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO3102 AcrA/AcrE family protein (NCBI ptt file) sig. 100 100
o Shewanella sp. ANA-3 Shewana3_1447 RND family efflux transporter MFP subunit (RefSeq) insig. 92 100
o Shewanella loihica PV-4 Shew_2439 RND family efflux transporter MFP subunit (RefSeq) insig. 60 97
o Shewanella amazonensis SB2B Sama_2181 AcrA/AcrE family protein (RefSeq) insig. 58 91
o Vibrio cholerae E7946 ATCC 55056 CSW01_17405 efflux RND transporter periplasmic adaptor subunit insig. 45 97
o Rhodanobacter sp. FW510-T8 OKGIIK_00975 efflux RND transporter periplasmic adaptor subunit cofit 37 87
o Marinobacter adhaerens HP15 HP15_3998 secretion protein HlyD insig. 40 85
o Castellaniella sp019104865 MT123 ABCV34_RS01440 efflux RND transporter periplasmic adaptor subunit insig. 35 87
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS00755 efflux RND transporter periplasmic adaptor subunit sig. 39 85
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS07755 efflux RND transporter periplasmic adaptor subunit insig. 38 85
  Rhodanobacter denitrificans MT42 LRK55_RS07485 efflux RND transporter periplasmic adaptor subunit insig. 37 85
o Dechlorosoma suillum PS Dsui_3443 RND family efflux transporter, MFP subunit strong 31 95
o Cellulophaga baltica 18 M666_RS14155 efflux RND transporter periplasmic adaptor subunit insig. 27 94
  Pectobacterium carotovorum WPP14 HER17_RS07495 efflux RND transporter periplasmic adaptor subunit insig. 32 79
o Azospirillum brasilense Sp245 AZOBR_RS04610 hypothetical protein insig. 30 87
o Pseudomonas aeruginosa MRSN321 DY961_RS27070 triB;inference=COORDINATES triclosan efflux RND transporter adaptor protein TriB sig. 28 84
o Pseudomonas aeruginosa PA14 IKLFDK_24755 triclosan efflux RND transporter adaptor protein TriB strong 28 84
o Pseudomonas aeruginosa PUPa3 DQ20_RS31605 triB;inference=COORDINATES triclosan efflux RND transporter adaptor protein TriB insig. 28 84
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4561 Secretion protein HlyD precursor insig. 29 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03650 MexE family multidrug efflux RND transporter periplasmic adaptor subunit strong 27 93
  Herbaspirillum seropedicae SmR1 HSERO_RS07645 RND transporter MFP subunit insig. 28 85
o Pseudomonas fluorescens GW456-L13 PfGW456L13_459 Efflux transporter, RND family, MFP subunit insig. 28 88
  Escherichia coli ECRC100 OKFHMN_16280 mdtE multidrug transporter subunit MdtE cofit 28 83
  Escherichia coli ECRC101 MCAODC_06795 mdtE multidrug transporter subunit MdtE insig. 28 83
  Escherichia coli ECRC102 NIAGMN_14045 mdtE multidrug transporter subunit MdtE insig. 28 83
  Escherichia coli ECRC98 JDDGAC_19910 mdtE multidrug transporter subunit MdtE insig. 28 83
  Escherichia coli ECRC99 KEDOAH_11865 mdtE multidrug transporter subunit MdtE no data 28 83
  Escherichia coli BL21 ECD_03361 anaerobic multidrug efflux transporter, ArcA-regulated insig. 28 83
  Escherichia coli ECOR27 NOLOHH_08245 mdtE multidrug transporter subunit MdtE insig. 28 83
  Escherichia coli ECOR38 HEPCGN_15185 mdtE multidrug transporter subunit MdtE insig. 28 83
  Escherichia coli ECRC62 BNILDI_03310 mdtE multidrug transporter subunit MdtE insig. 28 83
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00189 Multidrug resistance protein MdtE insig. 28 83
  Escherichia coli BW25113 b3513 mdtE multidrug resistance efflux transporter (NCBI) insig. 28 83
o Pseudomonas sp. BP01 JOY50_RS28380 efflux RND transporter periplasmic adaptor subunit no data 28 99
o Xanthobacter sp. DMC5 GFF4351 Multidrug resistance protein MdtE insig. 27 92
o Pseudomonas sp. SVBP6 COO64_RS00855 efflux RND transporter periplasmic adaptor subunit insig. 25 89
  Escherichia fergusonii Becca EFB2_00295 Multidrug resistance protein MdtE insig. 27 83
  Paraburkholderia sabiae LMG 24235 QEN71_RS32630 efflux RND transporter periplasmic adaptor subunit insig. 25 85
  Escherichia coli Nissle 1917 ECOLIN_RS20100 multidrug transporter subunit MdtE insig. 27 83
  Dickeya dadantii 3937 DDA3937_RS04725 efflux RND transporter periplasmic adaptor subunit insig. 27 79
  Acinetobacter baumannii LAC-4 RR41_RS06070 multidrug efflux RND transporter periplasmic adaptor subunit AdeF insig. 27 90
  Shewanella loihica PV-4 Shew_1177 RND family efflux transporter MFP subunit (RefSeq) insig. 27 90
  Sphingobium sp. HT1-2 GFF3024 RND efflux system, membrane fusion protein cofit 26 91
o Bosea sp. OAE506 ABIE41_RS18645 efflux RND transporter periplasmic adaptor subunit cofit 27 92
  Azospirillum brasilense Sp245 AZOBR_RS04615 hypothetical protein insig. 28 88
o Fusobacterium nucleatum SB010 HUW76_07490 efflux RND transporter periplasmic adaptor subunit cofit 27 91
  Acinetobacter radioresistens SK82 MPMX26_02515 Multidrug resistance protein MdtA insig. 26 86
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1707 Efflux membrane fusion protein, RND family insig. 28 76
  Ralstonia solanacearum PSI07 RPSI07_RS07465 efflux RND transporter periplasmic adaptor subunit insig. 27 86
  Pseudomonas fluorescens SBW25 PFLU_RS01150 efflux RND transporter periplasmic adaptor subunit insig. 26 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS01150 efflux RND transporter periplasmic adaptor subunit sig. 26 79
  Paraburkholderia graminis OAS925 ABIE53_001509 membrane fusion protein (multidrug efflux system) insig. 26 89
o Pseudomonas putida KT2440 PP_5175 HlyD family secretion protein insig. 26 99
  Ralstonia solanacearum GMI1000 RS_RS24780 efflux RND transporter periplasmic adaptor subunit insig. 27 86
  Pseudomonas orientalis W4I3 QF045_RS04170 efflux RND transporter periplasmic adaptor subunit cofit 26 84
  Pseudomonas fluorescens GW456-L13 PfGW456L13_458 Efflux membrane fusion protein, RND family insig. 25 84
  Ralstonia solanacearum PSI07 RPSI07_RS23900 efflux RND transporter periplasmic adaptor subunit strong 30 90
  Shewanella sp. ANA-3 Shewana3_4046 RND family efflux transporter MFP subunit (RefSeq) strong 29 92
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16235 efflux RND transporter periplasmic adaptor subunit insig. 27 86
  Ralstonia solanacearum UW163 UW163_RS16970 efflux RND transporter periplasmic adaptor subunit insig. 27 86
  Pseudomonas sp. S08-1 OH686_22665 Probable RND efflux membrane fusion protein cofit 25 84
  Pseudomonas simiae WCS417 PS417_01045 RND transporter insig. 26 79
  Serratia liquefaciens MT49 IAI46_09930 efflux RND transporter periplasmic adaptor subunit insig. 25 90
  Pseudomonas sp. SVBP6 COO64_RS00860 efflux RND transporter periplasmic adaptor subunit insig. 27 88
  Methylophilus sp. DMC18 GFF2656 Multidrug resistance protein MdtA insig. 27 85
  Ralstonia sp. UNC404CL21Col ABZR87_RS23105 efflux RND transporter periplasmic adaptor subunit insig. 26 86
  Rhodopseudomonas palustris CGA009 TX73_009025 efflux RND transporter periplasmic adaptor subunit insig. 26 85
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS17385 efflux RND transporter periplasmic adaptor subunit insig. 32 56
  Marinobacter adhaerens HP15 HP15_3261 efflux transporter, RND family, MFP subunit strong 27 84
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4260 Probable Co/Zn/Cd efflux system membrane fusion protein insig. 28 86
  Pseudomonas sp. RS175 PFR28_04822 Multidrug resistance protein MdtA insig. 26 84
  Acinetobacter baumannii LAC-4 RR41_RS03395 efflux RND transporter periplasmic adaptor subunit insig. 24 84
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09450 MexE family multidrug efflux RND transporter periplasmic adaptor subunit strong 29 90
  Ralstonia solanacearum UW163 UW163_RS04130 MexE family multidrug efflux RND transporter periplasmic adaptor subunit insig. 29 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS13185 efflux RND transporter periplasmic adaptor subunit strong 26 92
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00435 Macrolide export protein MacA insig. 25 84
  Pseudomonas sp. DMC3 GFF4212 Macrolide export protein MacA cofit 25 80
  Pseudomonas sp. DMC3 GFF4213 Multidrug resistance protein MdtE insig. 28 91
  Lysobacter sp. OAE881 ABIE51_RS10085 efflux RND transporter periplasmic adaptor subunit no data 27 86
  Xanthobacter sp. DMC5 GFF2571 Efflux pump periplasmic linker BepF insig. 26 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3950 Efflux membrane fusion protein, RND family insig. 25 84
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01443 RND family efflux transporter, MFP subunit insig. 25 86
  Burkholderia phytofirmans PsJN BPHYT_RS25845 RND transporter MFP subunit insig. 25 93
  Agrobacterium fabrum C58 Atu3797 HlyD family secretion protein strong 26 89
  Dechlorosoma suillum PS Dsui_1556 RND family efflux transporter, MFP subunit insig. 26 80
  Caulobacter crescentus NA1000 CCNA_01261 periplasmic multidrug efflux lipoprotein precursor cofit 24 92
  Caulobacter crescentus NA1000 Δfur CCNA_01261 periplasmic multidrug efflux lipoprotein precursor cofit 24 92
  Alteromonas macleodii MIT1002 MIT1002_00728 Multidrug transporter MdtA insig. 23 82
  Ralstonia solanacearum GMI1000 RS_RS00050 MexE family multidrug efflux RND transporter periplasmic adaptor subunit strong 29 90
  Pseudomonas fluorescens FW300-N2C3 AO356_10390 RND transporter insig. 25 84
  Dickeya dianthicola ME23 DZA65_RS04590 efflux RND transporter periplasmic adaptor subunit insig. 29 80
  Variovorax sp. SCN45 GFF4390 Membrane-fusion protein insig. 26 81
  Shewanella sp. ANA-3 Shewana3_3848 RND family efflux transporter MFP subunit (RefSeq) cofit 25 95
  Variovorax sp. SCN45 GFF3726 RND efflux system, membrane fusion protein insig. 28 87
  Paraburkholderia graminis OAS925 ABIE53_005207 RND family efflux transporter MFP subunit sig. 25 86
  Shewanella amazonensis SB2B Sama_1906 HlyD family-like protein (RefSeq) strong 24 90
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3741 RND family efflux transporter, MFP subunit strong 28 93
  Ralstonia sp. UNC404CL21Col ABZR87_RS19030 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit strong 26 85
  Rahnella sp. WP5 EX31_RS17705 efflux RND transporter periplasmic adaptor subunit insig. 26 93
  Cupriavidus basilensis FW507-4G11 RR42_RS20645 MexE family multidrug efflux RND transporter periplasmic adaptor subunit no data 30 86