Homologs of SO2174 from Shewanella oneidensis MR-1

cyclic nucleotide phosphodiesterase, putative (NCBI ptt file)
SEED: cyclic nucleotide phosphodiesterase, putative

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO2174 cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_2431 diguanylate cyclase (RefSeq) insig. 75 93
o Marinobacter adhaerens HP15 HP15_4052 response regulator insig. 51 92
o Pseudomonas simiae WCS417 PS417_00910 diguanylate cyclase insig. 33 92
o Magnetospirillum magneticum AMB-1 AMB_RS09815 GGDEF domain-containing protein insig. 34 88
  Desulfovibrio vulgaris Miyazaki F DvMF_2350 diguanylate cyclase with PAS/PAC and GAF sensors (RefSeq) insig. 39 66
o Pseudomonas fluorescens GW456-L13 PfGW456L13_492 Sensory box/GGDEF family protein insig. 33 92
  Desulfovibrio vulgaris Miyazaki F DvMF_2758 diguanylate cyclase with PAS/PAC sensor (RefSeq) insig. 38 66
o Pseudomonas syringae pv. syringae B728a Psyr_0088 PAS:GGDEF insig. 33 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0088 PAS:GGDEF insig. 33 91
o Pseudomonas putida KT2440 PP_0216 putative sensory box/GGDEF family protein insig. 31 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1731 Sensory box/GGDEF family protein insig. 32 92
  Pseudomonas fluorescens SBW25 PFLU_RS00925 sensor domain-containing diguanylate cyclase insig. 39 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00925 sensor domain-containing diguanylate cyclase sig. 39 62
o Pseudomonas fluorescens FW300-N2E3 AO353_11520 diguanylate cyclase strong 32 92
o Pseudomonas fluorescens FW300-N2C3 AO356_10705 diguanylate cyclase insig. 31 92
  Desulfovibrio vulgaris Hildenborough JW710 DVU3068 GAF domain/sensory box/EAL domain protein (TIGR) insig. 39 61
  Desulfovibrio vulgaris Miyazaki F DvMF_1477 diguanylate cyclase with PAS/PAC sensor (RefSeq) sig. 38 63
o Pseudomonas sp. RS175 PFR28_04758 hypothetical protein insig. 31 92
  Pseudomonas fluorescens FW300-N2C3 AO356_24210 diguanylate cyclase sig. 38 59
  Rhodopseudomonas palustris CGA009 TX73_020695 diguanylate cyclase insig. 30 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4011 Sensory box/GGDEF family protein insig. 31 92
  Azospirillum brasilense Sp245 AZOBR_RS10245 diguanylate cyclase sig. 38 58
  Herbaspirillum seropedicae SmR1 HSERO_RS09550 diguanylate cyclase insig. 41 55
  Azospirillum brasilense Sp245 AZOBR_RS15555 transcriptional regulator insig. 37 56
  Azospirillum sp. SherDot2 MPMX19_04554 Response regulator PleD sig. 35 59
  Pseudomonas stutzeri RCH2 Psest_4293 PAS domain S-box/diguanylate cyclase (GGDEF) domain sig. 39 60
  Rhodospirillum rubrum S1H Rru_A3374 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) insig. 38 61
  Azospirillum sp. SherDot2 MPMX19_01264 hypothetical protein insig. 37 58
  Azospirillum sp. SherDot2 MPMX19_05239 hypothetical protein insig. 36 60
  Shewanella oneidensis MR-1 SO4457 GGDEF domain protein (NCBI ptt file) insig. 40 53
  Pseudomonas sp. RS175 PFR28_02096 hypothetical protein insig. 35 59
  Shewanella sp. ANA-3 Shewana3_3733 diguanylate cyclase (RefSeq) sig. 37 63
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1290 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 35 71
  Magnetospirillum magneticum AMB-1 AMB_RS17460 PAS domain S-box protein cofit 39 60
  Magnetospirillum magneticum AMB-1 AMB_RS23665 GGDEF domain-containing protein insig. 37 60
  Kangiella aquimarina DSM 16071 B158DRAFT_0954 diguanylate cyclase (GGDEF) domain insig. 36 58
  Synechococcus elongatus PCC 7942 Synpcc7942_1811 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor sig. 36 59
  Marinobacter adhaerens HP15 HP15_3803 GGDEF domain-like protein insig. 37 66
  Vibrio cholerae E7946 ATCC 55056 CSW01_18825 GGDEF domain-containing protein insig. 38 60
  Acidovorax sp. GW101-3H11 Ac3H11_1024 GGDEF/response regulator receiver domain protein insig. 36 60
  Dechlorosoma suillum PS Dsui_0970 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 58
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1642 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 35 59
  Shewanella oneidensis MR-1 SO4207 GGDEF domain protein (NCBI ptt file) strong 36 63
  Magnetospirillum magneticum AMB-1 AMB_RS21975 GGDEF domain-containing protein cofit 40 53
  Pseudomonas putida KT2440 PP_1411 GGDEF domain protein insig. 38 55
  Rhodospirillum rubrum S1H Rru_A1272 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain (NCBI) insig. 38 62
  Azospirillum brasilense Sp245 AZOBR_RS06990 response regulator receiver modulated diguanylate cyclase insig. 36 53
  Pseudomonas sp. S08-1 OH686_07500 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 57
  Azospirillum sp. SherDot2 MPMX19_03993 hypothetical protein insig. 36 51
  Rhizobium sp. OAE497 ABIE40_RS04125 diguanylate cyclase insig. 35 68
  Pseudomonas sp. S08-1 OH686_11660 hypothetical protein cofit 30 91
  Rhodospirillum rubrum S1H Rru_A3391 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 37 53
  Acidovorax sp. GW101-3H11 Ac3H11_3582 diguanylate cyclase (GGDEF domain) insig. 34 59
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02129 diguanylate cyclase (GGDEF) domain-containing protein insig. 39 60
  Desulfovibrio vulgaris Miyazaki F DvMF_1014 diguanylate cyclase (RefSeq) insig. 39 53
  Rhizobium sp. OAE497 ABIE40_RS02110 GGDEF domain-containing protein insig. 40 55
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15585 GGDEF domain-containing protein insig. 39 54
  Magnetospirillum magneticum AMB-1 AMB_RS16670 diguanylate cyclase insig. 37 55
  Cupriavidus basilensis FW507-4G11 RR42_RS01480 hypothetical protein insig. 34 69
  Rhodanobacter denitrificans MT42 LRK55_RS15305 GGDEF domain-containing protein insig. 39 54
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4001 FIG00638997: hypothetical protein insig. 39 51
  Marinobacter adhaerens HP15 HP15_2378 sensory box/GGDEF family protein insig. 37 58
  Shewanella amazonensis SB2B Sama_3137 response regulator receiver protein (RefSeq) strong 36 63
  Burkholderia phytofirmans PsJN BPHYT_RS34775 diguanylate cyclase insig. 35 58
  Shewanella sp. ANA-3 Shewana3_0269 diguanylate cyclase (RefSeq) cofit 40 53
  Rhodospirillum rubrum S1H Rru_A2567 Putative diguanylate cyclase (GGDEF domain) (NCBI) cofit 40 53
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4180 FIG00955126: hypothetical protein insig. 40 61
  Dechlorosoma suillum PS Dsui_3164 diguanylate cyclase (GGDEF) domain-containing protein cofit 39 53
  Ralstonia solanacearum PSI07 RPSI07_RS14965 GGDEF domain-containing protein insig. 36 70
  Pseudomonas syringae pv. syringae B728a Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 36 60
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1157 diguanylate cyclase with PAS/PAC sensor insig. 36 60
  Ralstonia sp. UNC404CL21Col ABZR87_RS21625 GGDEF domain-containing protein insig. 34 58
  Rhizobium sp. OAE497 ABIE40_RS08030 sensor domain-containing diguanylate cyclase insig. 41 52
  Rhodanobacter sp. FW510-T8 OKGIIK_04450 Diguanylate cyclase insig. 41 52
  Cupriavidus basilensis FW507-4G11 RR42_RS25885 diguanylate cyclase insig. 40 53
  Cupriavidus basilensis FW507-4G11 RR42_RS31060 diguanylate cyclase insig. 37 66
  Desulfovibrio vulgaris Miyazaki F DvMF_3203 diguanylate cyclase (RefSeq) cofit 37 57
  Pseudomonas sp. S08-1 OH686_03265 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 36 59
  Paraburkholderia graminis OAS925 ABIE53_004649 diguanylate cyclase (GGDEF)-like protein strong 34 60
  Serratia liquefaciens MT49 IAI46_12920 diguanylate cyclase insig. 37 54
  Alteromonas macleodii MIT1002 MIT1002_00511 Bacteriophytochrome cph2 insig. 39 55
  Shewanella loihica PV-4 Shew_3381 diguanylate cyclase (RefSeq) strong 38 57
  Rhodospirillum rubrum S1H Rru_A1908 Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor and Response Regulator Receiver modulation (NCBI) insig. 36 63
  Rhodanobacter denitrificans MT42 LRK55_RS00270 sensor domain-containing diguanylate cyclase cofit 29 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00530 sensor domain-containing diguanylate cyclase insig. 29 97
  Acidovorax sp. GW101-3H11 Ac3H11_3345 hypothetical protein insig. 36 67
  Paraburkholderia sabiae LMG 24235 QEN71_RS16450 diguanylate cyclase insig. 35 58
  Burkholderia phytofirmans PsJN BPHYT_RS07820 hypothetical protein strong 35 61
  Kangiella aquimarina DSM 16071 B158DRAFT_0477 diguanylate cyclase (GGDEF) domain insig. 38 54
  Cupriavidus basilensis FW507-4G11 RR42_RS08985 diguanylate cyclase insig. 36 66
  Marinobacter adhaerens HP15 HP15_4093 membrane protein containing diguanylate cyclase, predicted domains insig. 38 55
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0187 diguanylate cyclase (GGDEF) domain insig. 38 61
  Pseudomonas fluorescens FW300-N2C3 AO356_11550 diguanylate cyclase insig. 39 61
  Rhizobium sp. OAE497 ABIE40_RS07330 PleD family two-component system response regulator cofit 37 58
  Rhodopseudomonas palustris CGA009 TX73_008830 diguanylate cyclase insig. 39 58
  Castellaniella sp019104865 MT123 ABCV34_RS10105 GGDEF domain-containing protein insig. 36 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_936 GGDEF domain protein cofit 40 53
  Pseudomonas stutzeri RCH2 Psest_0664 diguanylate cyclase (GGDEF) domain insig. 38 56
  Escherichia coli ECRC62 BNILDI_15045 yedQ cellulose biosynthesis regulator YedQ insig. 35 58