Homologs of SO1000 from Shewanella oneidensis MR-1

rhomboid family protein (NCBI ptt file)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO1000 rhomboid family protein (NCBI ptt file) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_3291 rhomboid family protein (RefSeq) sig. 80 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3269 Uncharacterized membrane protein (homolog of Drosophila rhomboid) insig. 34 95
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00445 hypothetical protein insig. 42 32
  Bacteroides ovatus ATCC 8483 BACOVA_04540 peptidase, S54 family strong 39 36
  Bacteroides thetaiotaomicron VPI-5482 BT1807 conserved protein, with rhomboid family domain (NCBI ptt file) sig. 36 36
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_17410 hypothetical protein insig. 36 40
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS18650 hypothetical protein insig. 30 53
  Bacteroides stercoris CC31F HMPREF1181_RS14560 rhomboid family intramembrane serine protease insig. 35 35
  Methylophilus sp. DMC18 GFF1687 Rhomboid protease GluP insig. 36 34
  Ralstonia solanacearum GMI1000 RS_RS24475 rhomboid family intramembrane serine protease insig. 38 37
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS23805 hypothetical protein insig. 30 41
  Ralstonia solanacearum PSI07 RPSI07_RS07120 rhomboid family intramembrane serine protease insig. 37 37
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16590 rhomboid family intramembrane serine protease insig. 37 37
  Ralstonia solanacearum UW163 UW163_RS17945 rhomboid family intramembrane serine protease insig. 37 37
  Escherichia fergusonii Becca EFB2_03443 Rhomboid protease GlpG insig. 36 27
  Escherichia coli Nissle 1917 ECOLIN_RS03530 rhomboid family intramembrane serine protease cofit 36 27
  Escherichia coli ECOR27 NOLOHH_23630 rhomboid family intramembrane serine protease insig. 37 27
  Shewanella amazonensis SB2B Sama_0736 hypothetical protein (RefSeq) insig. 34 35
  Escherichia coli BL21 ECD_00624 hypothetical protein insig. 36 27
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00445 hypothetical protein insig. 33 21
  Escherichia coli ECRC62 BNILDI_21640 Rhomboid family protein insig. 42 19
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03057 Rhomboid protease AarA insig. 36 27
  Acinetobacter baumannii LAC-4 RR41_RS08870 rhomboid family intramembrane serine protease insig. 32 28
  Acinetobacter radioresistens SK82 MPMX26_02337 Rhomboid protease AarA no data 31 33
  Rhizobium sp. OAE497 ABIE40_RS22145 rhomboid family intramembrane serine protease insig. 43 16
  Shewanella loihica PV-4 Shew_0702 rhomboid family protein (RefSeq) insig. 34 37
  Pectobacterium carotovorum WPP14 HER17_RS01525 rhomboid family intramembrane serine protease GlpG insig. 30 39
  Dinoroseobacter shibae DFL-12 Dshi_1200 Rhomboid family protein (RefSeq) insig. 40 17
  Bifidobacterium breve UCC2003 BBR_RS10575 rhomboid family intramembrane serine protease insig. 33 24
  Mycobacterium tuberculosis H37Rv Rv0110 Probable conserved integral membrane protein insig. 40 16
  Kangiella aquimarina DSM 16071 B158DRAFT_2032 Uncharacterized membrane protein (homolog of Drosophila rhomboid) insig. 34 24
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF589 GlpG protein (membrane protein of glp regulon) insig. 26 42
  Ralstonia solanacearum PSI07 RPSI07_RS04420 rhomboid family intramembrane serine protease insig. 35 24
  Cellulophaga baltica 18 M666_RS11080 rhomboid family intramembrane serine protease no data 43 11
  Serratia liquefaciens MT49 IAI46_23905 rhomboid family intramembrane serine protease GlpG cofit 27 38
  Rhodanobacter denitrificans MT42 LRK55_RS02645 rhomboid family intramembrane serine protease strong 30 31
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02895 rhomboid family intramembrane serine protease strong 30 31
  Ralstonia solanacearum GMI1000 RS_RS21940 rhomboid family intramembrane serine protease insig. 34 24
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09285 rhomboid family intramembrane serine protease cofit 33 28
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10495 rhomboid family intramembrane serine protease sig. 26 34
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13300 rhomboid family intramembrane serine protease sig. 35 20
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3516.1 GlpG protein (membrane protein of glp regulon) insig. 32 26
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_11875 glpG rhomboid family intramembrane serine protease GlpG cofit 26 43
  Erwinia tracheiphila SCR3 LU632_RS23010 glpG rhomboid family intramembrane serine protease GlpG sig. 26 43
  Marinobacter adhaerens HP15 HP15_1062 rhomboid family protein insig. 33 26
  Phocaeicola dorei CL03T12C01 ABI39_RS06625 rhomboid family intramembrane serine protease sig. 26 29
  Desulfovibrio vulgaris Hildenborough JW710 DVU1023 rhomboid family protein (TIGR) insig. 32 24
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1919.1 FIG056164: rhomboid family serine protease sig. 32 24
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS07095 rhomboid family intramembrane serine protease insig. 31 23
  Rhodanobacter sp. FW510-T8 OKGIIK_09875 glpG DUF1751 domain-containing protein cofit 31 23
  Burkholderia phytofirmans PsJN BPHYT_RS27555 peptidase insig. 30 27
  Escherichia coli ECOR38 HEPCGN_15755 glpG rhomboid family intramembrane serine protease GlpG insig. 25 42
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS19180 rhomboid family intramembrane serine protease insig. 30 33
  Ralstonia solanacearum UW163 UW163_RS19950 rhomboid family intramembrane serine protease insig. 30 33
  Escherichia fergusonii Becca EFB2_00405 Rhomboid protease GlpG insig. 25 42
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18280 rhomboid family intramembrane serine protease GlpG cofit 28 38
  Pantoea sp. MT58 IAI47_01760 rhomboid family intramembrane serine protease GlpG insig. 26 38
  Bacteroides stercoris CC31F HMPREF1181_RS01110 rhomboid family intramembrane serine protease no data 27 34
  Vibrio cholerae E7946 ATCC 55056 CSW01_00530 rhomboid family intramembrane serine protease GlpG insig. 33 25
  Lysobacter sp. OAE881 ABIE51_RS19240 rhomboid family intramembrane serine protease sig. 33 18
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.24.1 FIG056164: rhomboid family serine protease cofit 30 31
  Escherichia coli BL21 ECD_03275 rhomboid intramembrane serine protease insig. 25 42
  Escherichia coli ECOR27 NOLOHH_08730 glpG rhomboid family intramembrane serine protease GlpG insig. 25 42
  Escherichia coli ECRC100 OKFHMN_16935 glpG rhomboid family intramembrane serine protease GlpG cofit 25 42
  Escherichia coli ECRC101 MCAODC_07465 glpG rhomboid family intramembrane serine protease GlpG insig. 25 42
  Escherichia coli ECRC102 NIAGMN_14705 glpG rhomboid family intramembrane serine protease GlpG insig. 25 42
  Escherichia coli ECRC62 BNILDI_02785 glpG rhomboid family intramembrane serine protease GlpG cofit 25 42
  Escherichia coli ECRC98 JDDGAC_20565 glpG rhomboid family intramembrane serine protease GlpG insig. 25 42
  Escherichia coli ECRC99 KEDOAH_11205 glpG rhomboid family intramembrane serine protease GlpG no data 25 42
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00280 Rhomboid protease GlpG insig. 25 42
  Escherichia coli Nissle 1917 ECOLIN_RS19545 rhomboid family intramembrane serine protease GlpG no data 25 42
  Escherichia coli Nissle 1917 ECOLIN_RS26040 rhomboid family intramembrane serine protease GlpG no data 25 42
  Escherichia coli BW25113 b3424 glpG predicted intramembrane serine protease (NCBI) strong 25 42
  Erwinia amylovora T8 OLJFJH_04215 rhomboid family intramembrane serine protease GlpG insig. 27 39
  Marinobacter adhaerens HP15 HP15_3440 integral membrane protein insig. 38 16
  Pseudomonas sp. SVBP6 COO64_RS05505 rhomboid family intramembrane serine protease insig. 30 26
  Shewanella amazonensis SB2B Sama_0095 glpG protein (RefSeq) insig. 28 39
  Bacteroides ovatus ATCC 8483 BACOVA_02079 peptidase, S54 family insig. 26 34
  Enterobacter asburiae PDN3 EX28DRAFT_4122 rhomboid family protease GlpG insig. 26 39
  Pseudomonas sp. BP01 JOY50_RS16485 rhomboid family intramembrane serine protease insig. 30 27
  Klebsiella pneumoniae MKP103 KDGMDA_07055 rhomboid family intramembrane serine protease GlpG cofit 25 40
  Sphingobium sp. HT1-2 GFF2085 Rhomboid family protein cofit 28 27
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00435 rhomboid family intramembrane serine protease cofit 25 30
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0782 Uncharacterized membrane protein (homolog of Drosophila rhomboid) sig. 27 26
  Bacteroides thetaiotaomicron VPI-5482 BT2831 rhomboid family protein (NCBI ptt file) no data 26 34
  Pseudomonas sp. S08-1 OH686_17185 Integral membrane protein insig. 36 27
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS00375 rhomboid family intramembrane serine protease strong 26 25
  Klebsiella michiganensis M5al BWI76_RS26180 rhomboid family intramembrane serine protease GlpG strong 26 40
  Lysobacter sp. OAE881 ABIE51_RS06600 rhomboid family intramembrane serine protease cofit 29 24
  Rhodospirillum rubrum S1H Rru_A3565 Rhomboid-like protein (NCBI) insig. 33 25
  Phaeobacter inhibens DSM 17395 PGA1_c11740 rhomboid protein-like protein insig. 31 24
  Enterobacter sp. TBS_079 MPMX20_04307 Rhomboid protease GlpG sig. 25 39
  Pseudomonas putida KT2440 PP_2014 conserved membrane protein of unknown function insig. 31 27
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_13295 rhomboid family intramembrane serine protease strong 30 18
  Desulfovibrio vulgaris Miyazaki F DvMF_0913 Rhomboid family protein (RefSeq) insig. 35 14
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1180 membrane protein insig. 33 17
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0781 Uncharacterized membrane protein (homolog of Drosophila rhomboid) sig. 38 10
  Sinorhizobium meliloti 1021 SMc00730 hypothetical protein insig. 30 29
  Lysobacter sp. OAE881 ABIE51_RS12740 rhomboid family intramembrane serine protease insig. 27 30