Homologs of ygaE from Escherichia coli BW25113

ygaE: putative transcriptional regulator (VIMSS)
SEED: CsiR, transcriptional repressor of CsiD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
o Escherichia coli BL21 ECD_02520 transcriptional repressor of csiD insig. 100 100
o Escherichia coli ECOR27 NOLOHH_12725 csiR DNA-binding transcriptional regulator CsiR insig. 100 100
o Escherichia coli ECRC101 OKFHMN_20900 csiR DNA-binding transcriptional regulator CsiR insig. 100 100
o Escherichia coli ECRC101 MCAODC_11420 csiR DNA-binding transcriptional regulator CsiR insig. 100 100
o Escherichia coli ECRC102 NIAGMN_18665 csiR DNA-binding transcriptional regulator CsiR insig. 100 100
o Escherichia coli ECRC62 BNILDI_11285 csiR DNA-binding transcriptional regulator CsiR insig. 100 100
o Escherichia coli ECRC98 JDDGAC_24560 csiR DNA-binding transcriptional regulator CsiR no data 100 100
o Escherichia coli ECRC99 KEDOAH_07240 csiR DNA-binding transcriptional regulator CsiR no data 100 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01068 hypothetical protein insig. 100 100
  Escherichia coli BW25113 b2664 ygaE putative transcriptional regulator (VIMSS) strong 100 100
o Escherichia coli ECOR38 HEPCGN_20165 csiR DNA-binding transcriptional regulator CsiR cofit 100 100
o Escherichia coli Nissle 1917 ECOLIN_RS14855 DNA-binding transcriptional regulator CsiR insig. 100 100
o Escherichia fergusonii Becca EFB2_01266 HTH-type transcriptional repressor GlaR insig. 99 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1569 CsiR, transcriptional repressor of CsiD insig. 88 99
o Pseudomonas putida KT2440 PP_2908 DNA-binding transcriptional repressor strong 59 97
o Pseudomonas fluorescens FW300-N2C3 AO356_29960 GntR family transcriptional regulator no data 39 89
o Rhodopseudomonas palustris CGA009 TX73_017825 FCD domain-containing protein insig. 39 89
o Pseudomonas fluorescens FW300-N2E3 AO353_24300 transcriptional regulator insig. 34 91
o Serratia liquefaciens MT49 IAI46_12455 FCD domain-containing protein insig. 36 98
o Variovorax sp. OAS795 ABID97_RS29370 FCD domain-containing protein no data 36 90
o Variovorax sp. SCN45 GFF1053 no description insig. 35 96
o Bosea sp. OAE506 ABIE41_RS20215 GntR family transcriptional regulator insig. 33 91
o Dinoroseobacter shibae DFL-12 Dshi_0960 transcriptional regulator, GntR family (RefSeq) insig. 32 90
  Rhodopseudomonas palustris CGA009 TX73_021615 FCD domain-containing protein insig. 32 89
o Phaeobacter inhibens DSM 17395 PGA1_c28300 transcriptional regulator, GntR family insig. 33 84
  Bosea sp. OAE506 ABIE41_RS19155 GntR family transcriptional regulator insig. 32 90
  Azospirillum sp. SherDot2 MPMX19_04543 hypothetical protein no data 30 85
  Phaeobacter inhibens DSM 17395 PGA1_c36300 HTH-type transcriptional regulator, GntR family sig. 30 90
  Dechlorosoma suillum PS Dsui_0416 transcriptional regulator no data 29 92
  Azospirillum sp. SherDot2 MPMX19_02842 HTH-type transcriptional repressor RspR insig. 31 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS07670 GntR family transcriptional regulator insig. 30 89
  Rhodopseudomonas palustris CGA009 TX73_007535 GntR family transcriptional regulator insig. 29 90
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4256.1 Transcriptional regulator for ferulate or vanillate catabolism insig. 30 92
  Sinorhizobium meliloti 1021 SMa0160 GntR family transcriptional regulator insig. 31 89
  Bosea sp. OAE506 ABIE41_RS12215 GntR family transcriptional regulator insig. 31 89
o Pseudomonas sp. S08-1 OH686_01695 Propionate catabolism operon transcriptional regulator of GntR family cofit 29 90
o Ralstonia sp. UNC404CL21Col ABZR87_RS08175 GntR family transcriptional regulator insig. 29 90
  Cupriavidus basilensis FW507-4G11 RR42_RS07965 GntR family transcriptional regulator insig. 28 90
o Pseudomonas simiae WCS417 PS417_18135 GntR family transcriptional regulator no data 26 95
o Pseudomonas syringae pv. syringae B728a Psyr_2084 transcriptional regulator, GntR family sig. 29 90
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2084 transcriptional regulator, GntR family insig. 29 90
o Pseudomonas fluorescens SBW25 PFLU_RS22695 GntR family transcriptional regulator insig. 29 90
o Pseudomonas fluorescens SBW25-INTG PFLU_RS22695 GntR family transcriptional regulator strong 29 90
  Pseudomonas simiae WCS417 PS417_21085 GntR family transcriptional regulator insig. 29 90
o Paraburkholderia graminis OAS925 ABIE53_003184 DNA-binding GntR family transcriptional regulator insig. 30 90
  Pseudomonas fluorescens FW300-N2E3 AO353_00905 GntR family transcriptional regulator sig. 29 90
  Pseudomonas fluorescens SBW25 PFLU_RS20040 GntR family transcriptional regulator insig. 26 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20040 GntR family transcriptional regulator sig. 26 95
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3818 Propionate catabolism operon transcriptional regulator of GntR family [predicted] insig. 29 90
o Pseudomonas stutzeri RCH2 Psest_2322 Transcriptional regulators insig. 29 90
  Azospirillum brasilense Sp245 AZOBR_RS22370 transcriptional regulator insig. 29 95
o Castellaniella sp019104865 MT123 ABCV34_RS13490 GntR family transcriptional regulator insig. 32 89
  Burkholderia phytofirmans PsJN BPHYT_RS07325 GntR family transcriptional regulator insig. 30 93
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4119 Propionate catabolism operon transcriptional regulator of GntR family [predicted] sig. 29 90
  Marinobacter adhaerens HP15 HP15_1933 transcriptional regulator, GntR family insig. 30 91
  Shewanella amazonensis SB2B Sama_3293 GntR family transcriptional regulator (RefSeq) insig. 30 89
o Shewanella loihica PV-4 Shew_0280 GntR family transcriptional regulator (RefSeq) insig. 29 89
  Pseudomonas fluorescens FW300-N2E3 AO353_14930 GntR family transcriptional regulator insig. 29 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_6060 Propionate catabolism operon transcriptional regulator of GntR family [predicted] strong 29 90
  Pseudomonas putida KT2440 PP_2333 GntR family transcriptional regulator strong 28 90
  Bosea sp. OAE506 ABIE41_RS06650 GntR family transcriptional regulator insig. 26 88
  Pseudomonas fluorescens FW300-N2C3 AO356_20860 GntR family transcriptional regulator insig. 29 90
  Shewanella sp. ANA-3 Shewana3_3824 GntR family transcriptional regulator (RefSeq) strong 29 89
  Herbaspirillum seropedicae SmR1 HSERO_RS13485 AsnC family transcriptional regulator no data 28 86
o Pseudomonas sp. RS175 PFR28_02929 HTH-type transcriptional repressor GlaR sig. 29 90
  Variovorax sp. SCN45 GFF3755 Transcriptional regulator, GntR family cofit 29 83
  Variovorax sp. OAS795 ABID97_RS26360 GntR family transcriptional regulator no data 27 82
  Phaeobacter inhibens DSM 17395 PGA1_c02500 transcriptional regulator, GntR family insig. 28 90
  Burkholderia phytofirmans PsJN BPHYT_RS15065 GntR family transcriptional regulator insig. 29 90
  Shewanella sp. ANA-3 Shewana3_1582 GntR family transcriptional regulator (RefSeq) insig. 28 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03958 DNA-binding transcriptional regulator, GntR family insig. 29 90
  Shewanella loihica PV-4 Shew_1819 GntR family transcriptional regulator (RefSeq) strong 28 93
  Pseudomonas fluorescens FW300-N2C3 AO356_28640 GntR family transcriptional regulator insig. 27 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU2644 transcriptional regulator, GntR family (TIGR) strong 24 90
  Pectobacterium carotovorum WPP14 HER17_RS01295 GntR family transcriptional regulator insig. 31 92
  Pseudomonas sp. RS175 PFR28_01914 HTH-type transcriptional repressor RspR strong 26 91
  Burkholderia phytofirmans PsJN BPHYT_RS23940 GntR family transcriptional regulator insig. 28 89
o Rhizobium sp. OAE497 ABIE40_RS23190 FCD domain-containing protein cofit 27 89
  Bosea sp. OAE506 ABIE41_RS18525 GntR family transcriptional regulator insig. 26 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03567 transcriptional regulator, GntR family sig. 31 87
  Rhizobium sp. OAE497 ABIE40_RS23240 FCD domain-containing protein insig. 28 83
  Shewanella oneidensis MR-1 SO0346 transcriptional regulator. GntR family (NCBI ptt file) cofit 29 89
  Acidovorax sp. GW101-3H11 Ac3H11_960 Transcriptional regulator, GntR family insig. 30 89
  Magnetospirillum magneticum AMB-1 AMB_RS18145 GntR family transcriptional regulator cofit 26 89
  Shewanella amazonensis SB2B Sama_1528 GntR family transcriptional regulator (RefSeq) strong 28 89
  Paraburkholderia graminis OAS925 ABIE53_002671 DNA-binding GntR family transcriptional regulator insig. 30 92
  Shewanella oneidensis MR-1 SO2852 transcriptional regulator, GntR family (NCBI ptt file) sig. 27 89
  Bosea sp. OAE506 ABIE41_RS02250 GntR family transcriptional regulator insig. 24 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF172 Transcriptional regulator, GntR family insig. 29 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS17000 GntR family transcriptional regulator sig. 30 87
  Vibrio cholerae E7946 ATCC 55056 CSW01_06730 GntR family transcriptional regulator cofit 27 94
  Burkholderia phytofirmans PsJN BPHYT_RS23045 AsnC family transcriptional regulator no data 31 90
  Burkholderia phytofirmans PsJN BPHYT_RS34445 GntR family transcriptional regulator insig. 30 87
  Paraburkholderia graminis OAS925 ABIE53_004689 DNA-binding GntR family transcriptional regulator sig. 31 87
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF463 Transcriptional regulator, GntR family insig. 28 91
  Pseudomonas sp. S08-1 OH686_13190 Predicted regulator PutR for proline utilization, GntR family strong 26 90
  Cupriavidus basilensis FW507-4G11 RR42_RS05165 GntR family transcriptional regulator strong 29 93
  Variovorax sp. OAS795 ABID97_RS15845 GntR family transcriptional regulator insig. 30 89
  Paraburkholderia sabiae LMG 24235 QEN71_RS20820 phosphonate utilization associated transcriptional regulator insig. 26 93
  Azospirillum sp. SherDot2 MPMX19_04684 HTH-type transcriptional repressor RspR insig. 28 89