Conservation of cofitness between Xcc-8004.5193.1 and Xcc-8004.4539.1 in Xanthomonas campestris pv. campestris strain 8004

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.5193.1 Outer membrane protein assembly factor YaeT precursor 1.0 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) 0.50 7
Rhodanobacter denitrificans MT42 0.23 LRK55_RS12405 autotransporter assembly complex family protein 0.44 LRK55_RS08380 M3 family metallopeptidase low > 63
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS19705 autotransporter assembly complex family protein 0.46 ABZR86_RS14940 M3 family metallopeptidase low > 74
Rhodanobacter denitrificans FW104-10B01 0.23 LRK54_RS12665 autotransporter assembly complex protein TamA 0.44 LRK54_RS08615 M3 family metallopeptidase low > 59
Serratia liquefaciens MT49 0.20 IAI46_01770 outer membrane protein assembly factor 0.50 IAI46_24210 oligopeptidase A low > 86
Rahnella sp. WP5 0.19 EX31_RS08695 outer membrane protein assembly factor 0.48 EX31_RS05165 oligopeptidase A low > 89
Klebsiella michiganensis M5al 0.19 BWI76_RS02775 outer membrane protein assembly factor 0.48 BWI76_RS26610 oligopeptidase A low > 92
Pectobacterium carotovorum WPP14 0.19 HER17_RS03980 autotransporter assembly complex protein TamA 0.47 HER17_RS21300 oligopeptidase A 0.85 59
Marinobacter adhaerens HP15 0.19 HP15_2341 surface antigen (D15) 0.45 HP15_3759 oligopeptidase A-like protein low > 73
Enterobacter asburiae PDN3 0.18 EX28DRAFT_3406 Outer membrane protein 0.48 EX28DRAFT_4063 Zn-dependent oligopeptidases low > 76
Pantoea sp. MT58 0.18 IAI47_02715 outer membrane protein assembly factor 0.48 IAI47_01345 oligopeptidase A 0.31 7
Pseudomonas stutzeri RCH2 0.18 Psest_2132 Outer membrane protein 0.48 Psest_4320 Zn-dependent oligopeptidases low > 67
Enterobacter sp. TBS_079 0.18 MPMX20_00503 Translocation and assembly module subunit TamA 0.48 MPMX20_04397 Oligopeptidase A low > 85
Escherichia fergusonii Becca 0.18 EFB2_04309 Translocation and assembly module subunit TamA 0.48 EFB2_00317 Oligopeptidase A low > 86
Escherichia coli Nissle 1917 0.18 ECOLIN_RS24510 autotransporter assembly complex protein TamA 0.48 ECOLIN_RS19985 oligopeptidase A low > 55
Escherichia coli BW25113 0.18 b4220 ytfM predicted outer membrane protein and surface antigen (NCBI) 0.48 b3498 prlC oligopeptidase A (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.18 OHPLBJKB_03813 Translocation and assembly module subunit TamA 0.48 OHPLBJKB_00205 Oligopeptidase A low > 73
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_2601 Uncharacterized protein YtfM precursor 0.49 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) low > 87
Escherichia coli ECOR27 0.18 NOLOHH_04260 tamA autotransporter assembly complex protein TamA 0.48 NOLOHH_08350 prlC oligopeptidase A low > 75
Escherichia coli ECRC99 0.18 KEDOAH_16155 tamA autotransporter assembly complex protein TamA 0.48 KEDOAH_11730 prlC oligopeptidase A — —
Escherichia coli ECRC100 0.18 OKFHMN_12000 tamA autotransporter assembly complex protein TamA 0.48 OKFHMN_16415 prlC oligopeptidase A low > 80
Escherichia coli ECRC102 0.18 NIAGMN_09850 tamA autotransporter assembly complex protein TamA 0.48 NIAGMN_14180 prlC oligopeptidase A — —
Escherichia coli BL21 0.18 ECD_04091 translocation and assembly module for autotransporter export, outer membrane subunit 0.48 ECD_03347 oligopeptidase A low > 61
Escherichia coli ECRC101 0.18 MCAODC_02515 tamA autotransporter assembly complex protein TamA 0.48 MCAODC_06930 prlC oligopeptidase A low > 87
Escherichia coli ECRC62 0.18 BNILDI_07255 tamA autotransporter assembly complex protein TamA 0.48 BNILDI_03210 prlC oligopeptidase A low > 75
Escherichia coli ECRC98 0.18 JDDGAC_15640 tamA autotransporter assembly complex protein TamA 0.48 JDDGAC_20045 prlC oligopeptidase A low > 86
Escherichia coli ECOR38 0.18 HEPCGN_10200 tamA autotransporter assembly complex protein TamA 0.48 HEPCGN_15325 prlC oligopeptidase A low > 87
Dickeya dadantii 3937 0.18 DDA3937_RS17160 outer membrane protein assembly factor 0.48 DDA3937_RS21265 oligopeptidase A low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF874 Uncharacterized protein YtfM precursor 0.49 GFF517 Oligopeptidase A (EC 3.4.24.70) low > 78
Pseudomonas sp. RS175 0.18 PFR28_02752 Translocation and assembly module subunit TamA 0.49 PFR28_04699 Oligopeptidase A low > 88
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_144 Uncharacterized protein YtfM precursor 0.49 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) low > 103
Vibrio cholerae E7946 ATCC 55056 0.18 CSW01_12905 outer membrane protein assembly factor 0.49 CSW01_01010 oligopeptidase A low > 62
Pseudomonas fluorescens FW300-N1B4 0.17 Pf1N1B4_3997 Uncharacterized protein YtfM precursor 0.49 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) low > 87
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS18920 outer membrane protein assembly factor 0.49 PFLU_RS00240 oligopeptidase A low > 109
Erwinia tracheiphila SCR3 0.17 LU632_RS02105 autotransporter assembly complex protein TamA 0.49 LU632_RS19470 prlC oligopeptidase A low > 74
Pseudomonas simiae WCS417 0.17 PS417_16970 membrane protein 0.49 PS417_00245 oligopeptidase A low > 88
Pseudomonas fluorescens SBW25 0.17 PFLU_RS18920 outer membrane protein assembly factor 0.49 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_01050 hypothetical protein 0.49 AO356_11120 oligopeptidase A low > 104
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_27865 hypothetical protein 0.49 AO353_10775 oligopeptidase A low > 101
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_2478 surface antigen (D15):Surface antigen variable number 0.49 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_2478 surface antigen (D15):Surface antigen variable number 0.49 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Shewanella loihica PV-4 0.17 Shew_2172 surface antigen (D15) (RefSeq) 0.48 Shew_3657 oligopeptidase A (RefSeq) — —
Dickeya dianthicola 67-19 0.17 HGI48_RS17215 outer membrane protein assembly factor 0.48 HGI48_RS00045 oligopeptidase A low > 71
Dickeya dianthicola ME23 0.17 DZA65_RS18295 outer membrane protein assembly factor 0.48 DZA65_RS00035 oligopeptidase A low > 75
Pseudomonas putida KT2440 0.16 PP_2892 conserved exported protein of unknown function 0.49 PP_0096 oligopeptidase A low > 96
Alteromonas macleodii MIT1002 0.16 MIT1002_04048 Autotransporter assembly factor TamA 0.49 MIT1002_03633 Oligopeptidase A low > 70
Shewanella sp. ANA-3 0.15 Shewana3_1894 surface antigen (D15) (RefSeq) 0.49 Shewana3_4051 oligopeptidase A (RefSeq) low > 73
Shewanella oneidensis MR-1 0.15 SO2114 conserved hypothetical protein (NCBI ptt file) 0.49 SO4699 prlC oligopeptidase A (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.15 Sama_1616 hypothetical protein (RefSeq) 0.48 Sama_3546 oligopeptidase A (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.12 RR42_RS16040 membrane protein 0.58 RR42_RS07340 oligopeptidase A 0.27 66
Herbaspirillum seropedicae SmR1 0.11 HSERO_RS07725 membrane protein 0.62 HSERO_RS07290 oligopeptidase A low > 78
Ralstonia sp. UNC404CL21Col 0.11 ABZR87_RS00015 autotransporter assembly complex family protein 0.58 ABZR87_RS13490 M3 family metallopeptidase low > 80
Ralstonia solanacearum PSI07 0.11 RPSI07_RS12950 outer membrane protein assembly factor 0.58 RPSI07_RS15795 oligopeptidase A low > 81
Burkholderia phytofirmans PsJN 0.11 BPHYT_RS04945 membrane protein 0.56 BPHYT_RS12875 oligopeptidase A low > 109
Ralstonia solanacearum GMI1000 0.11 RS_RS11970 outer membrane protein assembly factor 0.57 RS_RS08035 oligopeptidase A low > 80
Paraburkholderia bryophila 376MFSha3.1 0.10 H281DRAFT_00153 autotransporter secretion outer membrane protein TamA 0.53 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A low > 103
Paraburkholderia graminis OAS925 0.10 ABIE53_001263 translocation and assembly module TamA 0.56 ABIE53_002798 oligopeptidase A 0.34 69
Paraburkholderia sabiae LMG 24235 0.10 QEN71_RS25050 autotransporter assembly complex family protein 0.57 QEN71_RS05695 M3 family metallopeptidase 0.64 93
Ralstonia solanacearum IBSBF1503 0.10 RALBFv3_RS04420 outer membrane protein assembly factor 0.58 RALBFv3_RS01690 oligopeptidase A 0.76 45
Ralstonia solanacearum UW163 0.10 UW163_RS09250 outer membrane protein assembly factor 0.58 UW163_RS15000 oligopeptidase A — —
Variovorax sp. SCN45 0.09 GFF2183 Outer membrane component of TAM transport system 0.54 GFF963 Oligopeptidase A (EC 3.4.24.70) low > 127
Variovorax sp. OAS795 0.08 ABID97_RS24415 BamA/TamA family outer membrane protein 0.55 ABID97_RS14080 M3 family metallopeptidase low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.08 GFF671 Surface antigen (D15) precursor 0.54 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.48 34
Acidovorax sp. GW101-3H11 0.08 Ac3H11_3933 Surface antigen (D15) precursor 0.54 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) low > 79

Not shown: 4 genomes with orthologs for Xcc-8004.5193.1 only; 6 genomes with orthologs for Xcc-8004.4539.1 only