Conservation of cofitness between Xcc-8004.3118.1 and Xcc-8004.4087.1 in Xanthomonas campestris pv. campestris strain 8004

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.3118.1 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 1.0 Xcc-8004.4087.1 Sulfate and thiosulfate binding protein CysP 0.64 4
Lysobacter sp. OAE881 0.79 ABIE51_RS07790 CinA family protein 0.57 ABIE51_RS01855 sulfate ABC transporter substrate-binding protein low > 62
Dyella japonica UNC79MFTsu3.2 0.68 ABZR86_RS00655 CinA family protein 0.52 ABZR86_RS02880 sulfate ABC transporter substrate-binding protein low > 74
Rhodanobacter sp. FW510-T8 0.66 OKGIIK_03735 pncC damage-inducible protein CinA 0.57 OKGIIK_10935 ABC transporter permease low > 52
Dickeya dadantii 3937 0.54 DDA3937_RS16250 nicotinamide-nucleotide amidase 0.53 DDA3937_RS15850 sulfate ABC transporter substrate-binding protein 0.85 4
Dickeya dianthicola 67-19 0.54 HGI48_RS16360 nicotinamide-nucleotide amidase 0.53 HGI48_RS15990 sulfate ABC transporter substrate-binding protein low > 71
Dickeya dianthicola ME23 0.53 DZA65_RS17455 nicotinamide-nucleotide amidase 0.53 DZA65_RS17075 sulfate ABC transporter substrate-binding protein low > 75
Escherichia coli ECOR27 0.52 NOLOHH_12540 pncC nicotinamide-nucleotide amidase 0.60 NOLOHH_05955 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 75
Marinobacter adhaerens HP15 0.52 HP15_1046 competence damage-inducible protein A 0.41 HP15_1344 thiosulfate transporter subunit low > 73
Escherichia coli ECRC62 0.52 BNILDI_11100 pncC nicotinamide-nucleotide amidase 0.60 BNILDI_05575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 75
Escherichia coli BL21 0.52 ECD_02550 nicotinamide-nucleotide amidohydrolase; NMN amidohydrolase 0.60 ECD_03802 sulfate transporter subunit low > 61
Escherichia coli Nissle 1917 0.52 ECOLIN_RS15065 nicotinamide-nucleotide amidase 0.59 ECOLIN_RS22565 sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_01034 Nicotinamide-nucleotide amidohydrolase PncC 0.59 OHPLBJKB_04134 Sulfate-binding protein low > 73
Escherichia coli BW25113 0.52 b2700 ygaD competence damage-inducible protein A (NCBI) 0.60 b3917 sbp sulfate transporter subunit (NCBI) low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_03581 Nicotinamide-nucleotide amidohydrolase PncC 0.59 MPMX20_04551 Sulfate-binding protein low > 85
Escherichia coli ECRC100 0.52 OKFHMN_20700 pncC nicotinamide-nucleotide amidase 0.59 OKFHMN_13820 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 80
Escherichia coli ECOR38 0.52 HEPCGN_19895 pncC nicotinamide-nucleotide amidase 0.59 HEPCGN_12465 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 87
Escherichia coli ECRC102 0.52 NIAGMN_18470 pncC nicotinamide-nucleotide amidase 0.59 NIAGMN_11575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp — —
Escherichia coli ECRC98 0.52 JDDGAC_24365 pncC nicotinamide-nucleotide amidase 0.59 JDDGAC_17445 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 86
Enterobacter asburiae PDN3 0.52 EX28DRAFT_2786 amidohydrolase, PncC family 0.59 EX28DRAFT_4391 sulfate/thiosulfate-binding protein low > 76
Escherichia coli ECRC99 0.52 KEDOAH_07435 pncC nicotinamide-nucleotide amidase 0.59 KEDOAH_14340 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp — —
Escherichia coli ECRC101 0.52 MCAODC_11225 pncC nicotinamide-nucleotide amidase 0.59 MCAODC_04320 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 87
Escherichia fergusonii Becca 0.52 EFB2_01224 Nicotinamide-nucleotide amidohydrolase PncC 0.60 EFB2_04701 Sulfate-binding protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF4694 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.59 GFF2284 Sulfate-binding protein Sbp low > 78
Klebsiella michiganensis M5al 0.49 BWI76_RS22185 hypothetical protein 0.58 BWI76_RS27500 sulfate transporter subunit low > 92
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS27055 CinA family protein 0.53 QEN71_RS22590 sulfate ABC transporter substrate-binding protein low > 153
Serratia liquefaciens MT49 0.47 IAI46_03835 nicotinamide-nucleotide amidase 0.57 IAI46_24640 sulfate ABC transporter substrate-binding protein low > 86
Pectobacterium carotovorum WPP14 0.46 HER17_RS05040 nicotinamide-nucleotide amidase 0.52 HER17_RS05670 sulfate ABC transporter substrate-binding protein low > 75
Erwinia tracheiphila SCR3 0.46 LU632_RS15740 pncC nicotinamide-nucleotide amidase 0.54 LU632_RS21830 sulfate ABC transporter substrate-binding protein low > 74
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_1377 CinA, C-terminal 0.54 Psyr_0084 extracellular solute-binding protein, family 1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_1377 CinA, C-terminal 0.54 Psyr_0084 extracellular solute-binding protein, family 1 low > 86
Pseudomonas stutzeri RCH2 0.46 Psest_2873 competence/damage-inducible protein CinA C-terminal domain 0.53 Psest_4060 sulfate/thiosulfate-binding protein low > 67
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_02870 CinA family protein 0.38 CSW01_02850 sulfate ABC transporter substrate-binding protein low > 62
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS16895 competence damage-inducible protein A 0.53 BPHYT_RS08790 ABC transporter permease low > 109
Pantoea sp. MT58 0.45 IAI47_04295 nicotinamide-nucleotide amidase 0.55 IAI47_00785 sulfate ABC transporter substrate-binding protein low > 76
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_06305 nicotinamide-nucleotide amidase 0.53 H281DRAFT_00778 sulfate transport system substrate-binding protein low > 103
Paraburkholderia graminis OAS925 0.44 ABIE53_003546 nicotinamide-nucleotide amidase 0.54 ABIE53_001990 sulfate/thiosulfate-binding protein low > 113
Pseudomonas sp. S08-1 0.44 OH686_18200 Nicotinamide-nucleotide amidase 0.53 OH686_11670 Sulfate and thiosulfate binding protein CysP low > 80
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS05880 CinA family protein 0.53 PFLU_RS00945 sulfate ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.44 PFLU_RS05880 CinA family protein 0.53 PFLU_RS00945 sulfate ABC transporter substrate-binding protein low > 109
Pseudomonas simiae WCS417 0.44 PS417_05810 damage-inducible protein CinA 0.53 PS417_00930 ABC transporter permease low > 88
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_16800 damage-inducible protein CinA 0.54 AO353_11540 ABC transporter permease low > 101
Dechlorosoma suillum PS 0.43 Dsui_0710 competence/damage-inducible protein CinA-like protein 0.53 Dsui_1525 sulfate/thiosulfate-binding protein low > 51
Rahnella sp. WP5 0.43 EX31_RS07805 nicotinamide-nucleotide amidase 0.55 EX31_RS14305 sulfate ABC transporter substrate-binding protein low > 89
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS01580 CinA family protein 0.55 ABZR87_RS11490 sulfate ABC transporter substrate-binding protein low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF3091 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.49 GFF5027 Sulfate and thiosulfate binding protein CysP low > 90
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_4669 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.53 PfGW456L13_486 Sulfate and thiosulfate binding protein CysP low > 87
Ralstonia solanacearum UW163 0.42 UW163_RS07710 CinA family protein 0.56 UW163_RS13365 sulfate ABC transporter substrate-binding protein — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS17625 damage-inducible protein CinA 0.51 RR42_RS12295 ABC transporter permease low > 128
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS05915 CinA family protein 0.56 RALBFv3_RS00035 sulfate ABC transporter substrate-binding protein low > 76
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS16840 competence damage-inducible protein A 0.56 HSERO_RS08185 sulfate transporter subunit low > 78
Ralstonia solanacearum PSI07 0.42 RPSI07_RS11330 CinA family protein 0.56 RPSI07_RS17445 sulfate ABC transporter substrate-binding protein — —
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_3142 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.54 Pf1N1B4_1727 Sulfate and thiosulfate binding protein CysP low > 87
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_05675 damage-inducible protein CinA 0.54 AO356_10685 ABC transporter permease low > 104
Ralstonia solanacearum GMI1000 0.42 RS_RS13860 CinA family protein 0.56 RS_RS06700 sulfate ABC transporter substrate-binding protein — —
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_2994 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.54 Pf6N2E2_4006 Sulfate and thiosulfate binding protein CysP low > 103
Azospirillum brasilense Sp245 0.41 AZOBR_RS14405 competence damage-inducible protein A 0.58 AZOBR_RS19265 sulfate transporter subunit low > 97
Pseudomonas putida KT2440 0.41 PP_1628 NMN amidohydrolase 0.53 PP_5171 sulfate ABC transporter low > 96
Pseudomonas sp. RS175 0.41 PFR28_00471 Nicotinamide-nucleotide amidohydrolase PncC 0.55 PFR28_04762 Sulfate-binding protein low > 88
Azospirillum sp. SherDot2 0.40 MPMX19_01107 Nicotinamide-nucleotide amidohydrolase PncC 0.56 MPMX19_04166 Sulfate-binding protein low > 112
Magnetospirillum magneticum AMB-1 0.40 AMB_RS12830 CinA family protein 0.53 AMB_RS10125 sulfate ABC transporter substrate-binding protein — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_738 C-terminal domain of CinA type S; Protein Implicated in DNA repair function with RecA and MutS 0.54 Ac3H11_581 Sulfate and thiosulfate binding protein CysP low > 79
Sinorhizobium meliloti 1021 0.39 SMc01039 hypothetical protein 0.55 SM_b21133 sulfate ABC transporter substrate-binding protein low > 103
Rhizobium sp. OAE497 0.37 ABIE40_RS09070 CinA family protein 0.57 ABIE40_RS24590 sulfate ABC transporter substrate-binding protein low > 107
Variovorax sp. SCN45 0.37 GFF6273 Nicotinamide-nucleotide amidase (EC 3.5.1.42) 0.53 GFF1247 Sulfate and thiosulfate binding protein CysP low > 127
Agrobacterium fabrum C58 0.36 Atu1442 competence/damage-inducible protein CinA 0.57 Atu0820 ABC transporter, substrate binding protein (sulfate) low > 89
Castellaniella sp019104865 MT123 0.33 ABCV34_RS10110 CinA family protein 0.47 ABCV34_RS03935 sulfate ABC transporter substrate-binding protein low > 48
Caulobacter crescentus NA1000 0.33 CCNA_01811 competence/damage-inducible protein CinA 0.54 CCNA_00288 ABC-type sulfate transport system, periplasmic component low > 66
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01811 competence/damage-inducible protein CinA 0.54 CCNA_00288 ABC-type sulfate transport system, periplasmic component low > 67
Bosea sp. OAE506 0.26 ABIE41_RS16805 CinA family protein 0.57 ABIE41_RS15360 sulfate ABC transporter substrate-binding protein low > 77

Not shown: 11 genomes with orthologs for Xcc-8004.3118.1 only; 7 genomes with orthologs for Xcc-8004.4087.1 only