| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_000050 | | Lrp/AsnC family transcriptional regulator | 1.0 | TX73_013955 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.48 | 12 |
| Bosea sp. OAE506 | 0.71 | ABIE41_RS02640 | | Lrp/AsnC family transcriptional regulator | 0.62 | ABIE41_RS19890 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 77 |
| Caulobacter crescentus NA1000 | 0.60 | CCNA_00432 | | AsnC-family transcriptional regulator | 0.43 | CCNA_01622 | | Rsh ppGpp hydrolase-synthetase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.60 | CCNA_00432 | | AsnC-family transcriptional regulator | 0.43 | CCNA_01622 | | Rsh ppGpp hydrolase-synthetase | low | > 67 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.57 | GFF5022 | | Transcriptional regulator, AsnC family | 0.30 | GFF1034 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS02555 | | transcriptional regulator | 0.31 | RR42_RS04920 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Agrobacterium fabrum C58 | 0.55 | Atu1885 | | transcriptional regulator, AsnC family | 0.59 | Atu1030 | | GTP pyrophosphohydrolase/synthetase, RelA/SpoT family | — | — |
| Burkholderia phytofirmans PsJN | 0.54 | BPHYT_RS07955 | | transcriptional regulator | 0.31 | BPHYT_RS15305 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Sinorhizobium meliloti 1021 | 0.54 | SMc00131 | | transcriptional regulator | 0.56 | SMc02659 | | GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein | low | > 103 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.54 | H281DRAFT_05082 | | transcriptional regulator, AsnC family | 0.32 | H281DRAFT_04004 | | (p)ppGpp synthetase I, SpoT/RelA | low | > 103 |
| Escherichia coli ECRC100 | 0.54 | OKFHMN_08280 | decR | DNA-binding transcriptional regulator DecR | 0.32 | OKFHMN_15555 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 80 |
| Escherichia coli ECOR38 | 0.54 | HEPCGN_06895 | decR | DNA-binding transcriptional regulator DecR | 0.32 | HEPCGN_14375 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 87 |
| Escherichia coli ECRC101 | 0.54 | MCAODC_27505 | decR | DNA-binding transcriptional regulator DecR | 0.32 | MCAODC_06065 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 87 |
| Escherichia coli BL21 | 0.54 | ECD_00399 | | putative DNA-binding transcriptional regulator | 0.32 | ECD_03507 | | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 61 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.54 | GFF4364 | | Putative HTH-type transcriptional regulator ybaO | 0.31 | GFF357 | | 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 | low | > 78 |
| Escherichia coli BW25113 | 0.54 | b0447 | ybaO | putative LRP-like transcriptional regulator (VIMSS) | 0.32 | b3650 | spoT | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | low | > 76 |
| Escherichia coli ECOR27 | 0.54 | NOLOHH_01215 | decR | DNA-binding transcriptional regulator DecR | 0.32 | NOLOHH_07435 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 75 |
| Escherichia coli ECRC98 | 0.54 | JDDGAC_11935 | decR | DNA-binding transcriptional regulator DecR | 0.32 | JDDGAC_19180 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.54 | ECOLIN_RS02680 | | DNA-binding transcriptional regulator DecR | 0.32 | ECOLIN_RS20790 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.54 | OHPLBJKB_03226 | | DNA-binding transcriptional activator DecR | 0.32 | OHPLBJKB_00051 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | low | > 73 |
| Escherichia coli ECRC102 | 0.54 | NIAGMN_06335 | decR | DNA-binding transcriptional regulator DecR | 0.32 | NIAGMN_13315 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Escherichia coli ECRC62 | 0.54 | BNILDI_22630 | decR | DNA-binding transcriptional regulator DecR | 0.32 | BNILDI_04080 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 75 |
| Escherichia coli ECRC99 | 0.54 | KEDOAH_19685 | decR | DNA-binding transcriptional regulator DecR | 0.32 | KEDOAH_12590 | spoT | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Serratia liquefaciens MT49 | 0.54 | IAI46_05065 | | Lrp/AsnC family transcriptional regulator | 0.32 | IAI46_24895 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 86 |
| Escherichia fergusonii Becca | 0.54 | EFB2_03610 | | DNA-binding transcriptional activator DecR | 0.32 | EFB2_00138 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | low | > 86 |
| Pseudomonas putida KT2440 | 0.54 | PP_4595 | | putative LRP-like transcriptional regulator | 0.32 | PP_5302 | | bifunctional (p)ppGpp synthase/hydrolase | — | — |
| Enterobacter sp. TBS_079 | 0.53 | MPMX20_01039 | | DNA-binding transcriptional activator DecR | 0.32 | MPMX20_00086 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | low | > 85 |
| Enterobacter asburiae PDN3 | 0.53 | EX28DRAFT_2522 | | Transcriptional regulators | 0.32 | EX28DRAFT_3899 | | (p)ppGpp synthetase, RelA/SpoT family | low | > 76 |
| Pantoea sp. MT58 | 0.53 | IAI47_14600 | | Lrp/AsnC family transcriptional regulator | 0.32 | IAI47_00510 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 76 |
| Paraburkholderia graminis OAS925 | 0.53 | ABIE53_001805 | | Lrp/AsnC family transcriptional regulator | 0.31 | ABIE53_003230 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 113 |
| Pectobacterium carotovorum WPP14 | 0.53 | HER17_RS15805 | | Lrp/AsnC family transcriptional regulator | 0.32 | HER17_RS21385 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 75 |
| Paraburkholderia sabiae LMG 24235 | 0.53 | QEN71_RS23210 | | Lrp/AsnC family transcriptional regulator | 0.31 | QEN71_RS03665 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 153 |
| Dickeya dianthicola ME23 | 0.52 | DZA65_RS06050 | | Lrp/AsnC family transcriptional regulator | 0.33 | DZA65_RS22150 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Dickeya dadantii 3937 | 0.52 | DDA3937_RS05680 | | Lrp/AsnC family transcriptional regulator | 0.32 | DDA3937_RS00180 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS32440 | | ArsR family transcriptional regulator | 0.48 | AZOBR_RS22045 | | GTP pyrophosphokinase | low | > 97 |
| Klebsiella michiganensis M5al | 0.52 | BWI76_RS06580 | | transcriptional regulator | 0.32 | BWI76_RS27430 | | (p)ppGpp synthetase | — | — |
| Dickeya dianthicola 67-19 | 0.52 | HGI48_RS05725 | | Lrp/AsnC ligand binding domain-containing protein | 0.33 | HGI48_RS21180 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Rahnella sp. WP5 | 0.52 | EX31_RS22300 | | Lrp/AsnC family transcriptional regulator | 0.32 | EX31_RS15810 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | low | > 89 |
| Acidovorax sp. GW101-3H11 | 0.52 | Ac3H11_4930 | | Transcriptional regulator, AsnC family | 0.30 | Ac3H11_3664 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Herbaspirillum seropedicae SmR1 | 0.52 | HSERO_RS14145 | | ArsR family transcriptional regulator | 0.31 | HSERO_RS10635 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.51 | ABZR87_RS13965 | | Lrp/AsnC family transcriptional regulator | 0.33 | ABZR87_RS15225 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 80 |
| Variovorax sp. SCN45 | 0.51 | GFF4980 | | Transcriptional regulator, AsnC family | 0.30 | GFF2375 | | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II | — | — |
| Rhizobium sp. OAE497 | 0.50 | ABIE40_RS10690 | | Lrp/AsnC family transcriptional regulator | 0.58 | ABIE40_RS06050 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.49 | CSW01_05405 | | Lrp/AsnC family transcriptional regulator | 0.32 | CSW01_13675 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.49 | MIT1002_03625 | | Leucine-responsive regulatory protein | 0.30 | MIT1002_00108 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | low | > 70 |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_0133 | | transcriptional regulator, AsnC family | 0.32 | Psyr_0209 | | RelA/SpoT protein | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_0133 | | transcriptional regulator, AsnC family | 0.32 | Psyr_0209 | | RelA/SpoT protein | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.48 | AO353_24405 | | ArsR family transcriptional regulator | 0.32 | AO353_09280 | | (p)ppGpp synthetase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.44 | Pf1N1B4_2240 | | Transcriptional regulator, AsnC family | 0.32 | Pf1N1B4_2113 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.44 | PFLU_RS28870 | | Lrp/AsnC family transcriptional regulator | 0.32 | PFLU_RS29510 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pseudomonas fluorescens SBW25 | 0.44 | PFLU_RS28870 | | Lrp/AsnC family transcriptional regulator | 0.32 | PFLU_RS29510 | | bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | — | — |
| Pseudomonas simiae WCS417 | 0.44 | PS417_27210 | | AsnC family transcriptional regulator | 0.32 | PS417_27830 | | (p)ppGpp synthetase | — | — |
| Pseudomonas sp. RS175 | 0.44 | PFR28_04311 | | DNA-binding transcriptional activator DecR | 0.32 | PFR28_04424 | | Bifunctional (p)ppGpp synthase/hydrolase SpoT | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.43 | PfGW456L13_910 | | Transcriptional regulator, AsnC family | 0.32 | PfGW456L13_780 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.43 | AO356_13070 | | AsnC family transcriptional regulator | 0.32 | AO356_12480 | | (p)ppGpp synthetase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.43 | Pf6N2E2_4493 | | Transcriptional regulator, AsnC family | 0.32 | Pf6N2E2_4361 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.43 | Dshi_1156 | | transcriptional regulator, AsnC family (RefSeq) | 0.39 | Dshi_0194 | | (p)ppGpp synthetase I, SpoT/RelA (RefSeq) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.41 | PGA1_c20730 | | transcriptional regulator, AsnC family | 0.39 | PGA1_c01010 | | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT | — | — |
| Pseudomonas stutzeri RCH2 | 0.40 | Psest_3518 | | Transcriptional regulators | 0.31 | Psest_3817 | | (p)ppGpp synthetase, RelA/SpoT family | — | — |
| Pseudomonas sp. S08-1 | 0.39 | OH686_21115 | | Transcriptional regulator, AsnC family | 0.33 | OH686_13550 | | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase / GTP pyrophosphokinase , (p)ppGpp synthetase II | low | > 80 |
| Rhodospirillum rubrum S1H | 0.38 | Rru_A2906 | | Transcriptional Regulator, AsnC family (NCBI) | 0.49 | Rru_A1856 | | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA (NCBI) | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.37 | A4249_RS13205 | | Lrp/AsnC family transcriptional regulator | 0.42 | A4249_RS05505 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 48 |
| Ralstonia solanacearum UW163 | 0.36 | UW163_RS05945 | | Lrp/AsnC family transcriptional regulator | 0.32 | UW163_RS10410 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.36 | RALBFv3_RS07680 | | Lrp/AsnC family transcriptional regulator | 0.32 | RALBFv3_RS03315 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | low | > 76 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.33 | Xcc-8004.4622.1 | | Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system | 0.31 | Xcc-8004.1215.1 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | — | — |
| Rhodanobacter denitrificans MT42 | 0.33 | LRK55_RS00365 | | winged helix-turn-helix transcriptional regulator | 0.32 | LRK55_RS11520 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
| Rhodanobacter sp. FW510-T8 | 0.33 | OKGIIK_06660 | lrp | AsnC family transcriptional regulator | 0.32 | OKGIIK_12100 | spoT | guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.33 | LRK54_RS00595 | | winged helix-turn-helix transcriptional regulator | 0.32 | LRK54_RS11795 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | — | — |
Not shown: 0 genomes with orthologs for TX73_000050 only; 34 genomes with orthologs for TX73_013955 only