Conservation of cofitness between TX73_013920 and TX73_012935 in Rhodopseudomonas palustris CGA009

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_013920 4-hydroxy-tetrahydrodipicolinate synthase 1.0 TX73_012935 LL-diaminopimelate aminotransferase 0.61 5
Bosea sp. OAE506 0.76 ABIE41_RS19960 4-hydroxy-tetrahydrodipicolinate synthase 0.82 ABIE41_RS19175 LL-diaminopimelate aminotransferase — —
Rhizobium sp. OAE497 0.60 ABIE40_RS06030 4-hydroxy-tetrahydrodipicolinate synthase 0.76 ABIE40_RS08645 LL-diaminopimelate aminotransferase — —
Agrobacterium fabrum C58 0.60 Atu1024 dihydrodipicolinate synthase 0.76 Atu1589 aminotransferase, class I — —
Sinorhizobium meliloti 1021 0.60 SMc02404 dihydrodipicolinate synthase 0.76 SMc00294 aminotransferase — —
Azospirillum sp. SherDot2 0.60 MPMX19_01219 4-hydroxy-tetrahydrodipicolinate synthase 0.63 MPMX19_00804 Glutamate-pyruvate aminotransferase AlaC — —
Rhodospirillum rubrum S1H 0.58 Rru_A1865 Dihydrodipicolinate synthase subfamily (NCBI) 0.64 Rru_A2411 Aminotransferase, class I and II (NCBI) low > 58
Azospirillum brasilense Sp245 0.58 AZOBR_RS08420 dihydrodipicolinate synthase 0.62 AZOBR_RS07830 aminotransferase — —
Magnetospirillum magneticum AMB-1 0.57 AMB_RS12805 4-hydroxy-tetrahydrodipicolinate synthase 0.62 AMB_RS18860 pyridoxal phosphate-dependent aminotransferase — —
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_01253 dihydrodipicolinate synthase 0.66 CCNA_01446 LL-diaminopimelate aminotransferase — —
Caulobacter crescentus NA1000 0.56 CCNA_01253 dihydrodipicolinate synthase 0.66 CCNA_01446 LL-diaminopimelate aminotransferase — —
Desulfovibrio vulgaris Miyazaki F 0.49 DvMF_0562 dihydrodipicolinate synthase (RefSeq) 0.52 DvMF_1411 aminotransferase class I and II (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU1868 dapA dihydrodipicolinate synthase (TIGR) 0.51 DVU0891 aminotransferase, classes I and II (TIGR) — —
Pseudomonas sp. RS175 0.43 PFR28_00699 4-hydroxy-tetrahydrodipicolinate synthase 0.50 PFR28_00596 Glutamate-pyruvate aminotransferase AlaC — —
Pseudomonas fluorescens SBW25 0.43 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase 0.49 PFLU_RS23580 alanine transaminase low > 109
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS07275 4-hydroxy-tetrahydrodipicolinate synthase 0.49 PFLU_RS23580 alanine transaminase low > 109
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_04530 4-hydroxy-tetrahydrodipicolinate synthase 0.50 AO356_05050 glutamate-pyruvate aminotransferase — —
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_2747 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.50 Pf6N2E2_2862 Uncharacterized PLP-dependent aminotransferase YfdZ — —
Dechlorosoma suillum PS 0.43 Dsui_1977 dihydrodipicolinate synthase 0.49 Dsui_2909 aspartate/tyrosine/aromatic aminotransferase — —
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_4507 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.50 PfGW456L13_1928 Uncharacterized PLP-dependent aminotransferase YfdZ low > 87
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_1548 dihydrodipicolinate synthase 0.49 Psyr_0468 Aminotransferase, class I and II — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_1548 dihydrodipicolinate synthase 0.49 Psyr_0468 Aminotransferase, class I and II — —
Pseudomonas simiae WCS417 0.43 PS417_07165 dihydrodipicolinate synthase 0.50 PS417_21975 glutamate-pyruvate aminotransferase low > 88
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS05475 4-hydroxy-tetrahydrodipicolinate synthase 0.62 A4249_RS02425 LL-diaminopimelate aminotransferase — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_3332 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.50 Pf1N1B4_555 Uncharacterized PLP-dependent aminotransferase YfdZ — —
Klebsiella michiganensis M5al 0.42 BWI76_RS20905 4-hydroxy-tetrahydrodipicolinate synthase 0.50 BWI76_RS20495 alanine transaminase — —
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_17670 4-hydroxy-tetrahydrodipicolinate synthase 0.50 AO353_03235 glutamate-pyruvate aminotransferase — —
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS06250 dihydrodipicolinate synthase 0.49 RR42_RS28540 glutamate--pyruvate aminotransferase low > 128
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS16395 dihydrodipicolinate synthase 0.51 HSERO_RS12800 aspartate aminotransferase — —
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0182 4-hydroxy-tetrahydrodipicolinate synthase 0.50 EX28DRAFT_0240 Aspartate/tyrosine/aromatic aminotransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2180 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.50 GFF1970 Uncharacterized PLP-dependent aminotransferase YfdZ — —
Enterobacter sp. TBS_079 0.41 MPMX20_03340 4-hydroxy-tetrahydrodipicolinate synthase 0.49 MPMX20_03277 Glutamate-pyruvate aminotransferase AlaC — —
Sphingomonas koreensis DSMZ 15582 0.41 Ga0059261_0213 4-hydroxy-tetrahydrodipicolinate synthase 0.63 Ga0059261_1288 Aspartate/tyrosine/aromatic aminotransferase — —
Pseudomonas sp. S08-1 0.41 OH686_19215 4-hydroxy-tetrahydrodipicolinate synthase 0.49 OH686_04000 Glutamate-pyruvate aminotransferase AlaC — —
Escherichia coli ECOR38 0.40 HEPCGN_21085 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.49 HEPCGN_21580 alaC alanine transaminase — —
Escherichia coli ECRC102 0.40 NIAGMN_19685 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.50 NIAGMN_20145 alaC alanine transaminase — —
Pantoea sp. MT58 0.40 IAI47_05265 4-hydroxy-tetrahydrodipicolinate synthase 0.50 IAI47_05575 alanine transaminase — —
Escherichia coli BL21 0.40 ECD_02370 dihydrodipicolinate synthase 0.49 ECD_02289 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase — —
Escherichia coli ECOR27 0.40 NOLOHH_13575 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.49 NOLOHH_14055 alaC alanine transaminase — —
Escherichia coli ECRC101 0.40 MCAODC_12445 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.50 MCAODC_12900 alaC alanine transaminase — —
Escherichia coli Nissle 1917 0.40 ECOLIN_RS14145 4-hydroxy-tetrahydrodipicolinate synthase 0.49 ECOLIN_RS13690 alanine transaminase — —
Escherichia coli ECRC98 0.40 JDDGAC_25860 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.50 JDDGAC_26335 alaC alanine transaminase — —
Escherichia fergusonii Becca 0.40 EFB2_01408 4-hydroxy-tetrahydrodipicolinate synthase 0.49 EFB2_01495 Glutamate-pyruvate aminotransferase AlaC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01251 4-hydroxy-tetrahydrodipicolinate synthase 0.49 OHPLBJKB_01342 Glutamate-pyruvate aminotransferase AlaC — —
Escherichia coli ECRC100 0.40 OKFHMN_21915 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.50 OKFHMN_22370 alaC alanine transaminase — —
Escherichia coli BW25113 0.40 b2478 dapA dihydrodipicolinate synthase (NCBI) 0.49 b2379 yfdZ hypothetical protein (NCBI) — —
Escherichia coli ECRC62 0.40 BNILDI_12385 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.49 BNILDI_12910 alaC alanine transaminase — —
Escherichia coli ECRC99 0.40 KEDOAH_06305 dapA 4-hydroxy-tetrahydrodipicolinate synthase 0.50 KEDOAH_05850 alaC alanine transaminase — —
Dickeya dadantii 3937 0.40 DDA3937_RS06065 4-hydroxy-tetrahydrodipicolinate synthase 0.49 DDA3937_RS14825 alanine transaminase — —
Rahnella sp. WP5 0.40 EX31_RS22740 4-hydroxy-tetrahydrodipicolinate synthase 0.50 EX31_RS20015 alanine transaminase low > 89
Pseudomonas putida KT2440 0.40 PP_1237 4-hydroxy-tetrahydrodipicolinate synthase 0.50 PP_0817 aminotransferase low > 96
Dickeya dianthicola 67-19 0.40 HGI48_RS06110 4-hydroxy-tetrahydrodipicolinate synthase 0.49 HGI48_RS14755 alanine transaminase — —
Pectobacterium carotovorum WPP14 0.40 HER17_RS15415 4-hydroxy-tetrahydrodipicolinate synthase 0.49 HER17_RS06655 alanine transaminase — —
Castellaniella sp019104865 MT123 0.39 ABCV34_RS15825 4-hydroxy-tetrahydrodipicolinate synthase 0.52 ABCV34_RS02290 alanine transaminase — —
Acidovorax sp. GW101-3H11 0.39 Ac3H11_277 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) 0.50 Ac3H11_3720 Uncharacterized PLP-dependent aminotransferase YfdZ low > 79
Serratia liquefaciens MT49 0.39 IAI46_18780 4-hydroxy-tetrahydrodipicolinate synthase 0.49 IAI46_18180 alanine transaminase low > 86
Dickeya dianthicola ME23 0.39 DZA65_RS06460 4-hydroxy-tetrahydrodipicolinate synthase 0.49 DZA65_RS15705 alanine transaminase — —
Methanococcus maripaludis S2 0.35 MMP_RS03035 4-hydroxy-tetrahydrodipicolinate synthase 0.21 MMP_RS07845 LL-diaminopimelate aminotransferase 0.77 5
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS17235 4-hydroxy-tetrahydrodipicolinate synthase 0.26 ABI39_RS10505 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme — —
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS03990 4-hydroxy-tetrahydrodipicolinate synthase 0.26 HMPREF1058_RS14790 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme — —
Methanococcus maripaludis JJ 0.34 MMJJ_RS02035 4-hydroxy-tetrahydrodipicolinate synthase 0.21 MMJJ_RS06510 LL-diaminopimelate aminotransferase low > 28
Parabacteroides merdae CL09T00C40 0.34 HMPREF1078_RS01735 4-hydroxy-tetrahydrodipicolinate synthase 0.26 HMPREF1078_RS01130 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme — —
Bacteroides thetaiotaomicron VPI-5482 0.33 BT0895 dihydrodipicolinate synthase (NCBI ptt file) 0.24 BT3935 aminotransferase (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.33 BACOVA_02617 dihydrodipicolinate synthase 0.25 BACOVA_01161 aminotransferase, class I/II — —
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS14165 4-hydroxy-tetrahydrodipicolinate synthase 0.24 HMPREF1181_RS06565 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.30 Echvi_3959 dihydrodipicolinate synthase 0.24 Echvi_0124 Aspartate/tyrosine/aromatic aminotransferase — —
Mycobacterium tuberculosis H37Rv 0.29 Rv2753c Probable dihydrodipicolinate synthase DapA (DHDPS) (dihydrodipicolinate synthetase) 0.16 Rv1178 Probable aminotransferase — —
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_1847 dapA dihydrodipicolinate synthase 0.36 Synpcc7942_1794 succinyldiaminopimelate transaminase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_04485 4-hydroxy-tetrahydrodipicolinate synthase 0.19 CA264_01550 aminotransferase — —

Not shown: 33 genomes with orthologs for TX73_013920 only; 1 genomes with orthologs for TX73_012935 only