| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_004310 | | cytochrome c oxidase subunit 3 | 1.0 | TX73_012660 | | dicarboxylate/amino acid:cation symporter | 0.79 | 17 |
| Rhizobium sp. OAE497 | 0.66 | ABIE40_RS04085 | | cytochrome c oxidase subunit 3 | 0.54 | ABIE40_RS26345 | | dicarboxylate/amino acid:cation symporter | low | > 107 |
| Agrobacterium fabrum C58 | 0.65 | Atu0771 | | cytochrome c oxidase subunit III | 0.54 | Atu3298 | | C4-dicarboxylate transporter DctA | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.62 | SMc00013 | | cytochrome C oxidase subunit III transmembrane protein | 0.50 | SM_b20611 | | C4-dicarboxylate transporter DctA | low | > 103 |
| Sphingomonas koreensis DSMZ 15582 | 0.51 | Ga0059261_2002 | | Heme/copper-type cytochrome/quinol oxidase, subunit 3 | 0.49 | Ga0059261_1634 | | Na+/H+-dicarboxylate symporters | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.50 | CCNA_03513 | | cytochrome c oxidase subunit III coxC | 0.52 | CCNA_00664 | | C4-dicarboxylate transport protein | low | > 67 |
| Caulobacter crescentus NA1000 | 0.50 | CCNA_03513 | | cytochrome c oxidase subunit III coxC | 0.52 | CCNA_00664 | | C4-dicarboxylate transport protein | low | > 66 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.49 | A4249_RS00135 | | cytochrome c oxidase subunit 3 | 0.50 | A4249_RS04425 | | dicarboxylate/amino acid:cation symporter | low | > 48 |
| Azospirillum brasilense Sp245 | 0.45 | AZOBR_RS10570 | | cytochrome B562 | 0.50 | AZOBR_RS21140 | | C4-dicarboxylate ABC transporter | low | > 97 |
| Azospirillum sp. SherDot2 | 0.41 | MPMX19_00889 | | Cytochrome c oxidase subunit 3 | 0.50 | MPMX19_04253 | | Aerobic C4-dicarboxylate transport protein | low | > 112 |
| Cupriavidus basilensis FW507-4G11 | 0.35 | RR42_RS01895 | | MFS transporter | 0.55 | RR42_RS01695 | | C4-dicarboxylate transporter | low | > 128 |
| Pseudomonas stutzeri RCH2 | 0.34 | Psest_4329 | | Heme/copper-type cytochrome/quinol oxidase, subunit 3 | 0.23 | Psest_4075 | | symporter for L-glutamate, L-glutamine, and L-proline (from data) | low | > 67 |
| Ralstonia solanacearum GMI1000 | 0.33 | RS_RS01805 | | cytochrome c oxidase subunit 3 | 0.57 | RS_RS01625 | | C4-dicarboxylate transporter 1 | low | > 80 |
| Ralstonia solanacearum UW163 | 0.33 | UW163_RS02615 | | cytochrome c oxidase subunit 3 | 0.57 | UW163_RS02795 | | dicarboxylate/amino acid:cation symporter | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.33 | RALBFv3_RS10965 | | cytochrome c oxidase subunit 3 | 0.57 | RALBFv3_RS10785 | | dicarboxylate/amino acid:cation symporter | low | > 76 |
| Ralstonia solanacearum PSI07 | 0.33 | RPSI07_RS22340 | | cytochrome c oxidase subunit 3 | 0.57 | RPSI07_RS22530 | | dicarboxylate/amino acid:cation symporter | low | > 81 |
| Lysobacter sp. OAE881 | 0.33 | ABIE51_RS19190 | | cytochrome c oxidase subunit 3 | 0.21 | ABIE51_RS06350 | | dicarboxylate/amino acid:cation symporter | low | > 62 |
| Pseudomonas sp. RS175 | 0.33 | PFR28_04688 | | Cytochrome c oxidase subunit 3 | 0.49 | PFR28_03241 | | C4-dicarboxylate transport protein 2 | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.32 | AO356_11175 | | MFS transporter | 0.48 | AO356_18980 | | sodium:C4-dicarboxylate symporter (dctA) (from data) | low | > 104 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.32 | Xcc-8004.4842.1 | | Cytochrome c oxidase polypeptide III (EC 1.9.3.1) | 0.50 | Xcc-8004.1034.1 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | 0.25 | 73 |
| Pseudomonas fluorescens GW456-L13 | 0.32 | PfGW456L13_611 | | Cytochrome c oxidase polypeptide III (EC 1.9.3.1) | 0.49 | PfGW456L13_2016 | | C4-dicarboxylate transporter (from data) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.32 | Pf6N2E2_4101 | | Cytochrome c oxidase polypeptide III (EC 1.9.3.1) | 0.49 | Pf6N2E2_5707 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.32 | AO353_10845 | | MFS transporter | 0.47 | AO353_02800 | | C4-dicarboxylate transporter | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.32 | Pf1N1B4_1857 | | Cytochrome c oxidase polypeptide III (EC 1.9.3.1) | 0.49 | Pf1N1B4_3487 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | low | > 87 |
| Ralstonia sp. UNC404CL21Col | 0.32 | ABZR87_RS06820 | | cytochrome c oxidase subunit 3 | 0.57 | ABZR87_RS06625 | | dicarboxylate/amino acid:cation symporter | low | > 80 |
| Kangiella aquimarina DSM 16071 | 0.32 | B158DRAFT_0134 | | Heme/copper-type cytochrome/quinol oxidase, subunit 3 | 0.19 | B158DRAFT_2215 | | Na+/H+-dicarboxylate symporters | low | > 40 |
| Herbaspirillum seropedicae SmR1 | 0.32 | HSERO_RS20770 | | MFS transporter | 0.47 | HSERO_RS13105 | | C4-dicarboxylate ABC transporter | low | > 78 |
| Pseudomonas putida KT2440 | 0.31 | PP_0106 | | cytochrome c oxidase subunit 3 | 0.50 | PP_1188 | | C4-dicarboxylate transport protein | low | > 96 |
| Castellaniella sp019104865 MT123 | 0.31 | ABCV34_RS13255 | | cytochrome c oxidase subunit 3 | 0.54 | ABCV34_RS02715 | | dicarboxylate/amino acid:cation symporter | low | > 48 |
| Shewanella loihica PV-4 | 0.31 | Shew_0122 | | cytochrome c oxidase, subunit III (RefSeq) | 0.25 | Shew_0743 | | sodium:dicarboxylate symporter (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.30 | MIT1002_04032 | | Cytochrome c oxidase subunit 3 | 0.20 | MIT1002_01542 | | Glutamate-aspartate carrier protein | low | > 70 |
| Acidovorax sp. GW101-3H11 | 0.30 | Ac3H11_3888 | | Cytochrome c oxidase polypeptide III (EC 1.9.3.1) | 0.49 | Ac3H11_719 | | Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate, aspartate | low | > 79 |
| Pseudomonas sp. S08-1 | 0.30 | OH686_12310 | | Cytochrome c oxidase polypeptide III | 0.50 | OH686_20585 | | Na+/H+-dicarboxylate symporter | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.30 | PFLU_RS00305 | | cytochrome c oxidase subunit 3 | 0.50 | PFLU_RS23115 | | dicarboxylate/amino acid:cation symporter | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.30 | PFLU_RS00305 | | cytochrome c oxidase subunit 3 | 0.50 | PFLU_RS23115 | | dicarboxylate/amino acid:cation symporter | low | > 109 |
| Shewanella sp. ANA-3 | 0.30 | Shewana3_3994 | | cytochrome c oxidase, subunit III (RefSeq) | 0.24 | Shewana3_3362 | | sodium:dicarboxylate symporter (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.30 | SO4609 | | cytochrome c oxidase subunit III (NCBI ptt file) | 0.25 | SO0922 | | proton/glutamate symporter (NCBI ptt file) | low | > 76 |
| Marinobacter adhaerens HP15 | 0.29 | HP15_3774 | | cytochrome c oxidase subunit III | 0.17 | HP15_2676 | | proton/sodium-glutamate symport protein | low | > 73 |
| Pseudomonas simiae WCS417 | 0.29 | PS417_00315 | | MFS transporter | 0.50 | PS417_21500 | | C4 dicarboxylate transporter DctA (from data) | low | > 88 |
| Variovorax sp. SCN45 | 0.29 | GFF2302 | | Cytochrome c oxidase polypeptide III (EC 1.9.3.1) | 0.51 | GFF822 | | Na+/H+-dicarboxylate symporter | low | > 127 |
| Variovorax sp. OAS795 | 0.29 | ABID97_RS23940 | | cytochrome c oxidase subunit 3 | 0.52 | ABID97_RS26560 | | dicarboxylate/amino acid:cation symporter | — | — |
| Shewanella amazonensis SB2B | 0.28 | Sama_3486 | | cytochrome c oxidase subunit III (RefSeq) | 0.25 | Sama_2768 | | proton/glutamate symporter (RefSeq) | low | > 62 |
| Paraburkholderia graminis OAS925 | 0.28 | ABIE53_000678 | | cytochrome c oxidase subunit 3 | 0.52 | ABIE53_004012 | | aerobic C4-dicarboxylate transport protein | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.28 | H281DRAFT_01990 | | cytochrome c oxidase subunit 3 | 0.53 | H281DRAFT_02039 | | aerobic C4-dicarboxylate transport protein | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.27 | BPHYT_RS02665 | | MFS transporter | 0.53 | BPHYT_RS02510 | | C4-dicarboxylate ABC transporter | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.27 | QEN71_RS01520 | | cytochrome c oxidase subunit 3 | 0.54 | QEN71_RS01365 | | dicarboxylate/amino acid:cation symporter | low | > 153 |
| Dyella japonica UNC79MFTsu3.2 | 0.24 | ABZR86_RS12920 | | cytochrome c oxidase subunit 3 | 0.50 | ABZR86_RS08515 | | dicarboxylate/amino acid:cation symporter | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.23 | LRK55_RS06850 | | cytochrome c oxidase subunit 3 | 0.12 | LRK55_RS00475 | | dicarboxylate/amino acid:cation symporter | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.23 | LRK54_RS07110 | | cytochrome c oxidase subunit 3 | 0.12 | LRK54_RS00700 | | dicarboxylate/amino acid:cation symporter | low | > 59 |
Not shown: 6 genomes with orthologs for TX73_004310 only; 36 genomes with orthologs for TX73_012660 only