Conservation of cofitness between TX73_002960 and TX73_010535 in Rhodopseudomonas palustris CGA009

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_002960 ActR/PrrA/RegA family redox response regulator transcription factor 1.0 TX73_010535 biotin synthase BioB 0.57 4
Rhizobium sp. OAE497 0.71 ABIE40_RS19505 ActR/PrrA/RegA family redox response regulator transcription factor 0.61 ABIE40_RS21075 biotin synthase BioB low > 107
Agrobacterium fabrum C58 0.70 Atu0050 two component response regulator 0.63 Atu3997 biotin synthetase low > 89
Phaeobacter inhibens DSM 17395 0.63 PGA1_c35390 photosynthetic apparatus regulatory protein RegA 0.64 PGA1_c09120 biotin synthase BioB — —
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_00247 two-component receiver protein SpdR 0.56 CCNA_03636 biotin synthase low > 67
Caulobacter crescentus NA1000 0.50 CCNA_00247 two-component receiver protein SpdR 0.56 CCNA_03636 biotin synthase low > 66
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS04040 response regulator transcription factor 0.54 LRK54_RS10260 biotin synthase BioB — —
Rhodanobacter denitrificans MT42 0.43 LRK55_RS03810 response regulator transcription factor 0.54 LRK55_RS09900 biotin synthase BioB low > 63
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_10900 two-component system response regulator 0.55 OKGIIK_13650 bioB biotin synthase BioB — —
Pseudomonas sp. S08-1 0.43 OH686_08680 Dna binding response regulator PrrA (RegA) 0.59 OH686_10355 biotin synthase low > 80
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS10115 response regulator transcription factor 0.57 ABZR86_RS15840 biotin synthase BioB — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_4230 Helix-turn-helix, Fis-type 0.59 Psyr_4687 biotin synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_4230 Helix-turn-helix, Fis-type 0.59 Psyr_4687 biotin synthase low > 86
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_5048 Dna binding response regulator PrrA (RegA) 0.58 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) low > 87
Pseudomonas putida KT2440 0.42 PP_0888 Photosynthetic apparatus regulatory protein RegA 0.59 PP_0362 Biotin synthase low > 96
Pseudomonas stutzeri RCH2 0.42 Psest_3338 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 0.59 Psest_0411 biotin synthetase low > 67
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_05335 chemotaxis protein CheY 0.58 AO353_07525 biotin synthase — —
Pseudomonas sp. RS175 0.41 PFR28_00137 Photosynthetic apparatus regulatory protein RegA 0.58 PFR28_04103 Biotin synthase — —
Dechlorosoma suillum PS 0.41 Dsui_1180 response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein 0.56 Dsui_1297 biotin synthetase low > 51
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_1115 Dna binding response regulator PrrA (RegA) 0.59 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) low > 87
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS04140 response regulator transcription factor 0.59 PFLU_RS27650 biotin synthase BioB low > 109
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_07205 chemotaxis protein CheY 0.58 AO356_14135 biotin synthase — —
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3302 Dna binding response regulator PrrA (RegA) 0.58 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS04140 response regulator transcription factor 0.59 PFLU_RS27650 biotin synthase BioB low > 109
Pseudomonas simiae WCS417 0.41 PS417_04100 chemotaxis protein CheY 0.58 PS417_26005 biotin synthase — —
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS00325 response regulator transcription factor 0.56 QEN71_RS01085 biotin synthase BioB — —
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS01625 chemotaxis protein CheY 0.57 BPHYT_RS02150 biotin synthase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_02208 two component transcriptional regulator, Fis family 0.57 H281DRAFT_02097 biotin synthase — —
Paraburkholderia graminis OAS925 0.38 ABIE53_000420 two-component system response regulator RegA 0.57 ABIE53_000577 biotin synthase — —
Variovorax sp. SCN45 0.38 GFF5672 Dna binding response regulator PrrA (RegA) 0.50 GFF937 Biotin synthase (EC 2.8.1.6) low > 127
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS13000 chemotaxis protein CheY 0.55 HSERO_RS12235 biotin synthase low > 78
Ralstonia solanacearum UW163 0.36 UW163_RS03965 DNA-binding response regulator 0.55 UW163_RS03115 biotin synthase BioB — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS09615 DNA-binding response regulator 0.55 RALBFv3_RS10465 biotin synthase BioB low > 76
Variovorax sp. OAS795 0.36 ABID97_RS07610 response regulator transcription factor 0.49 ABID97_RS13955 biotin synthase BioB low > 91
Ralstonia solanacearum GMI1000 0.36 RS_RS00200 DNA-binding response regulator 0.55 RS_RS01305 biotin synthase low > 80
Ralstonia solanacearum PSI07 0.36 RPSI07_RS23750 DNA-binding response regulator 0.55 RPSI07_RS22850 biotin synthase BioB 0.60 43
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS05135 response regulator transcription factor 0.54 ABZR87_RS06265 biotin synthase BioB — —
Acidovorax sp. GW101-3H11 0.35 Ac3H11_3147 Dna binding response regulator PrrA (RegA) 0.50 Ac3H11_2272 Biotin synthase (EC 2.8.1.6) — —
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS01085 chemotaxis protein CheY 0.56 RR42_RS00940 biotin synthase low > 128
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.3041.1 Dna binding response regulator PrrA (RegA) 0.56 Xcc-8004.505.1 Biotin synthase (EC 2.8.1.6) low > 74
Shewanella oneidensis MR-1 0.34 SO4172 DNA-binding response regulator (NCBI ptt file) 0.59 SO2740 bioB biotin synthase (NCBI ptt file) — —
Lysobacter sp. OAE881 0.34 ABIE51_RS09795 response regulator transcription factor 0.59 ABIE51_RS01140 biotin synthase BioB — —
Shewanella loihica PV-4 0.34 Shew_3342 two component Fis family transcriptional regulator (RefSeq) 0.56 Shew_1719 biotin synthase (RefSeq) — —
Shewanella sp. ANA-3 0.33 Shewana3_3707 response regulator receiver protein (RefSeq) 0.59 Shewana3_2519 biotin synthase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.33 Sama_3186 response regulator receiver protein (RefSeq) 0.60 Sama_1438 biotin synthase (RefSeq) — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_1560 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 0.59 Ga0059261_3989 biotin synthase (EC 2.8.1.6) low > 68
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_1932 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 0.59 B158DRAFT_0864 biotin synthase (EC 2.8.1.6) — —
Marinobacter adhaerens HP15 0.31 HP15_3981 two component transcriptional regulator, Fis family 0.61 HP15_2486 biotin synthase low > 73

Not shown: 6 genomes with orthologs for TX73_002960 only; 45 genomes with orthologs for TX73_010535 only