Conservation of cofitness between TX73_023700 and TX73_002655 in Rhodopseudomonas palustris CGA009

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_023700 2-dehydropantoate 2-reductase 1.0 TX73_002655 DNA mismatch repair protein MutS 0.50 10
Bosea sp. OAE506 0.55 ABIE41_RS11280 2-dehydropantoate 2-reductase 0.55 ABIE41_RS03650 DNA mismatch repair protein MutS low > 77
Paraburkholderia sabiae LMG 24235 0.54 QEN71_RS14995 2-dehydropantoate 2-reductase 0.30 QEN71_RS06085 DNA mismatch repair protein MutS low > 153
Variovorax sp. OAS795 0.53 ABID97_RS00870 2-dehydropantoate 2-reductase 0.27 ABID97_RS20815 DNA mismatch repair protein MutS low > 91
Acidovorax sp. GW101-3H11 0.52 Ac3H11_2346 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.29 Ac3H11_3641 DNA mismatch repair protein MutS low > 79
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS09230 2-dehydropantoate 2-reductase 0.30 HSERO_RS16360 DNA mismatch repair protein MutS low > 78
Variovorax sp. SCN45 0.52 GFF3590 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.27 GFF6634 DNA mismatch repair protein MutS low > 127
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS18435 2-dehydropantoate 2-reductase 0.31 ABZR87_RS10580 DNA mismatch repair protein MutS low > 80
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS27355 2-dehydropantoate 2-reductase 0.32 BPHYT_RS12475 DNA mismatch repair protein MutS low > 109
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF2467 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.31 GFF4773 DNA mismatch repair protein MutS low > 78
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_01683 ketopantoate reductase (EC 1.1.1.169) 0.32 H281DRAFT_00537 DNA mismatch repair protein MutS low > 103
Alteromonas macleodii MIT1002 0.24 MIT1002_01348 2-dehydropantoate 2-reductase 0.33 MIT1002_00953 DNA mismatch repair protein MutS low > 70
Pseudomonas putida KT2440 0.24 PP_2998 2-dehydropantoate 2-reductase 0.32 PP_1626 DNA mismatch repair protein MutS 0.14 36
Azospirillum brasilense Sp245 0.24 AZOBR_RS12955 2-dehydropantoate 2-reductase 0.50 AZOBR_RS02125 DNA mismatch repair protein MutS — —
Ralstonia solanacearum GMI1000 0.22 RS_RS23145 2-dehydropantoate 2-reductase 0.30 RS_RS05735 DNA mismatch repair protein MutS low > 80
Ralstonia solanacearum PSI07 0.22 RPSI07_RS05730 2-dehydropantoate 2-reductase 0.31 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Vibrio cholerae E7946 ATCC 55056 0.21 CSW01_11730 2-dehydropantoate 2-reductase 0.33 CSW01_02840 DNA mismatch repair protein MutS low > 62
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS09455 2-dehydropantoate 2-reductase 0.31 HMPREF1078_RS06455 DNA mismatch repair protein MutS low > 61
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS32960 2-dehydropantoate 2-reductase 0.31 RR42_RS06285 DNA mismatch repair protein MutS low > 128
Caulobacter crescentus NA1000 0.19 CCNA_00262 ketopantoate reductase panE/ApbA family protein 0.45 CCNA_00012 DNA mismatch repair protein MutS low > 66
Ralstonia solanacearum UW163 0.19 UW163_RS21310 2-dehydropantoate 2-reductase 0.30 UW163_RS12390 DNA mismatch repair protein MutS — —
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS17830 2-dehydropantoate 2-reductase 0.30 RALBFv3_RS14920 DNA mismatch repair protein MutS — —
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_00262 ketopantoate reductase panE/ApbA family protein 0.45 CCNA_00012 DNA mismatch repair protein MutS low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_06150 hypothetical protein 0.30 CA264_18545 DNA mismatch repair protein MutS low > 74
Pseudomonas stutzeri RCH2 0.18 Psest_1140 2-dehydropantoate 2-reductase 0.33 Psest_2875 DNA mismatch repair protein MutS low > 67
Marinobacter adhaerens HP15 0.18 HP15_4040 ketopantoate reductase ApbA/PanE 0.32 HP15_1047 DNA mismatch repair protein MutS low > 73
Pseudomonas sp. S08-1 0.17 OH686_01745 2-dehydropantoate 2-reductase 0.31 OH686_18195 DNA mismatch repair protein MutS low > 80
Pseudomonas sp. RS175 0.17 PFR28_00963 hypothetical protein 0.32 PFR28_00429 DNA mismatch repair protein MutS low > 88
Phocaeicola dorei CL03T12C01 0.17 ABI39_RS05455 ketopantoate reductase family protein 0.30 ABI39_RS05500 DNA mismatch repair protein MutS low > 72
Phocaeicola vulgatus CL09T03C04 0.16 HMPREF1058_RS11485 ketopantoate reductase family protein 0.30 HMPREF1058_RS11435 DNA mismatch repair protein MutS low > 67
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_2074 ketopantoate reductase 0.32 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_2074 ketopantoate reductase 0.32 Psyr_1376 DNA mismatch repair protein MutS low > 86
Bacteroides thetaiotaomicron VPI-5482 0.16 BT3117 putative oxidoreductase (NCBI ptt file) 0.30 BT3121 DNA mismatch repair protein mutS (NCBI ptt file) low > 81
Enterobacter sp. TBS_079 0.16 MPMX20_01144 2-dehydropantoate 2-reductase 0.31 MPMX20_03619 DNA mismatch repair protein MutS low > 85
Escherichia coli ECOR38 0.15 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.31 HEPCGN_19705 mutS DNA mismatch repair protein MutS low > 87
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_2468 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.32 Pf6N2E2_3035 DNA mismatch repair protein MutS low > 103
Bacteroides ovatus ATCC 8483 0.15 BACOVA_02822 2-dehydropantoate 2-reductase 0.29 BACOVA_02824 DNA mismatch repair protein MutS low > 94
Escherichia coli BW25113 0.15 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.31 b2733 mutS DNA mismatch repair protein (NCBI) low > 76
Dyella japonica UNC79MFTsu3.2 0.15 ABZR86_RS12305 2-dehydropantoate 2-reductase 0.32 ABZR86_RS00630 DNA mismatch repair protein MutS low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.15 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.31 OHPLBJKB_01000 DNA mismatch repair protein MutS low > 73
Escherichia coli ECRC62 0.15 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.31 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli ECOR27 0.15 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.31 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli BL21 0.15 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.31 ECD_02583 methyl-directed mismatch repair protein low > 61
Bacteroides stercoris CC31F 0.15 HMPREF1181_RS01990 2-dehydropantoate 2-reductase 0.29 HMPREF1181_RS01980 DNA mismatch repair protein MutS low > 56
Escherichia coli Nissle 1917 0.15 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.31 ECOLIN_RS15275 DNA mismatch repair protein MutS low > 55
Escherichia coli ECRC98 0.15 JDDGAC_12050 panE 2-dehydropantoate 2-reductase 0.31 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 86
Escherichia coli ECRC99 0.15 KEDOAH_19570 panE 2-dehydropantoate 2-reductase 0.31 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Dickeya dianthicola 67-19 0.15 HGI48_RS06950 oxidoreductase 0.31 HGI48_RS05230 DNA mismatch repair protein MutS low > 71
Escherichia fergusonii Becca 0.15 EFB2_03632 2-dehydropantoate 2-reductase 0.31 EFB2_01179 DNA mismatch repair protein MutS low > 86
Escherichia coli ECRC102 0.15 NIAGMN_06450 panE 2-dehydropantoate 2-reductase 0.31 NIAGMN_18295 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC101 0.15 MCAODC_27620 panE 2-dehydropantoate 2-reductase 0.31 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECRC100 0.15 OKFHMN_08395 panE 2-dehydropantoate 2-reductase 0.31 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 80
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS08395 putative 2-dehydropantoate 2-reductase 0.32 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas fluorescens SBW25 0.15 PFLU_RS08395 putative 2-dehydropantoate 2-reductase 0.32 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas simiae WCS417 0.15 PS417_08445 2-dehydropantoate 2-reductase 0.32 PS417_05680 DNA mismatch repair protein MutS low > 88
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_286 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.32 Pf1N1B4_3117 DNA mismatch repair protein MutS low > 87
Enterobacter asburiae PDN3 0.14 EX28DRAFT_2416 2-dehydropantoate 2-reductase 0.31 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Dickeya dianthicola ME23 0.14 DZA65_RS07295 oxidoreductase 0.31 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Pseudomonas fluorescens GW456-L13 0.14 PfGW456L13_2227 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.32 PfGW456L13_4672 DNA mismatch repair protein MutS low > 87
Dickeya dadantii 3937 0.14 DDA3937_RS11860 oxidoreductase 0.32 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_03195 2-dehydropantoate 2-reductase 0.32 AO356_05875 DNA mismatch repair protein MutS low > 104
Pectobacterium carotovorum WPP14 0.14 HER17_RS13760 oxidoreductase 0.32 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Erwinia tracheiphila SCR3 0.13 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.31 LU632_RS06485 mutS DNA mismatch repair protein MutS low > 74
Klebsiella michiganensis M5al 0.12 BWI76_RS14790 2-dehydropantoate 2-reductase 0.31 BWI76_RS22600 DNA mismatch repair protein MutS — —
Pseudomonas fluorescens FW300-N2E3 0.12 AO353_19045 2-dehydropantoate 2-reductase 0.32 AO353_16625 DNA mismatch repair protein MutS low > 101
Serratia liquefaciens MT49 0.12 IAI46_04950 2-dehydropantoate 2-reductase 0.31 IAI46_03800 DNA mismatch repair protein MutS low > 86
Shewanella oneidensis MR-1 0.12 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) 0.32 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.12 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) 0.33 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) low > 73
Shewanella loihica PV-4 0.12 Shew_2895 2-dehydropantoate 2-reductase (RefSeq) 0.33 Shew_1214 DNA mismatch repair protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.11 Sama_2559 2-dehydropantoate 2-reductase (RefSeq) 0.32 Sama_1045 DNA mismatch repair protein MutS (RefSeq) — —

Not shown: 2 genomes with orthologs for TX73_023700 only; 30 genomes with orthologs for TX73_002655 only