Conservation of cofitness between TX73_006200 and TX73_001095 in Rhodopseudomonas palustris CGA009

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_006200 sigma-54-dependent Fis family transcriptional regulator 1.0 TX73_001095 acetate--CoA ligase 0.64 2
Variovorax sp. SCN45 0.35 GFF6444 no description 0.45 GFF475 Acetyl-CoA synthetase (EC 6.2.1.1) low > 127
Rhodospirillum rubrum S1H 0.34 Rru_A0932 Sigma54 Specific Transcriptional Regulator containing GAF, and Fis DNA-binding domains (NCBI) 0.73 Rru_A3575 Acetate--CoA ligase (NCBI) 0.51 3
Dechlorosoma suillum PS 0.34 Dsui_1463 transcriptional activator of acetoin/glycerol metabolism 0.46 Dsui_2003 acetate--CoA ligase low > 51
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS28085 Fis family transcriptional regulator 0.46 BPHYT_RS07000 acetyl-CoA synthetase low > 109
Serratia liquefaciens MT49 0.32 IAI46_12320 sigma-54-dependent Fis family transcriptional regulator 0.67 IAI46_01405 acetate--CoA ligase low > 86
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS34270 Fis family transcriptional regulator 0.48 RR42_RS13880 AMP-dependent synthetase 0.39 3
Variovorax sp. OAS795 0.32 ABID97_RS15005 sigma-54-dependent Fis family transcriptional regulator 0.46 ABID97_RS27430 acetate--CoA ligase low > 91
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_00325 GAF modulated sigma54 specific transcriptional regulator, Fis family 0.46 H281DRAFT_04953 acetyl-coenzyme A synthetase low > 103
Paraburkholderia graminis OAS925 0.32 ABIE53_004383 transcriptional regulator of acetoin/glycerol metabolism 0.46 ABIE53_001664 acetyl-CoA synthetase 0.27 81
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS12445 sigma-54-dependent Fis family transcriptional regulator 0.46 QEN71_RS23765 acetate--CoA ligase 0.82 6
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF5398 Nitrogen regulation protein NR(I) 0.47 GFF4107 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.83 17
Klebsiella michiganensis M5al 0.31 BWI76_RS21990 ATPase AAA 0.68 BWI76_RS02095 acetyl-coenzyme A synthetase 0.56 2
Castellaniella sp019104865 MT123 0.30 ABCV34_RS02700 sigma-54-dependent Fis family transcriptional regulator 0.46 ABCV34_RS00680 acetate--CoA ligase low > 48
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS09475 Fis family transcriptional regulator 0.45 HSERO_RS07770 acetyl-CoA synthetase 0.31 30
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS15930 sigma-54-dependent Fis family transcriptional regulator 0.46 ABZR87_RS14360 acetate--CoA ligase 0.42 45
Acidovorax sp. GW101-3H11 0.30 Ac3H11_4391 Transcriptional activator of acetoin/glycerol metabolism 0.45 Ac3H11_951 Acetyl-coenzyme A synthetase (EC 6.2.1.1) 0.64 2
Pseudomonas putida KT2440 0.30 PP_0546 sigma-54 dependent transcriptional regulator 0.68 PP_4487 acetyl-CoA synthetase low > 96
Pseudomonas stutzeri RCH2 0.29 Psest_2888 Transcriptional activator of acetoin/glycerol metabolism 0.63 Psest_2657 acetate--CoA ligase low > 67
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_19490 Fis family transcriptional regulator 0.67 AO353_03060 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) low > 101
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.877.1 hypothetical protein 0.69 Xcc-8004.5157.1 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 74
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_175 sigma-54 dependent transcriptional regulator 0.68 Pf1N1B4_3430 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 87
Pseudomonas sp. RS175 0.28 PFR28_03884 Acetoin catabolism regulatory protein 0.68 PFR28_03289 Acetyl-coenzyme A synthetase low > 88
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_2355 sigma-54 dependent transcriptional regulator 0.68 PfGW456L13_1963 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 87
Pseudomonas simiae WCS417 0.28 PS417_24805 Fis family transcriptional regulator 0.67 PS417_21750 acetyl-CoA synthetase 0.48 5
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_15230 Fis family transcriptional regulator 0.68 AO356_18695 Acetyl-coenzyme A synthetase (EC 6.2.1.1) (from data) low > 104
Ralstonia solanacearum IBSBF1503 0.27 RALBFv3_RS07820 sigma-54-dependent Fis family transcriptional regulator 0.47 RALBFv3_RS02445 acetate--CoA ligase low > 76
Marinobacter adhaerens HP15 0.27 HP15_2165 sigma-54 dependent transcriptional regulator 0.70 HP15_811 acetyl-CoA synthetase low > 73
Ralstonia solanacearum PSI07 0.27 RPSI07_RS09460 sigma-54-dependent Fis family transcriptional regulator 0.47 RPSI07_RS14880 acetate--CoA ligase low > 81
Pseudomonas fluorescens SBW25 0.27 PFLU_RS26740 sigma-54-dependent Fis family transcriptional regulator 0.67 PFLU_RS23355 acetate--CoA ligase low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS26740 sigma-54-dependent Fis family transcriptional regulator 0.67 PFLU_RS23355 acetate--CoA ligase 0.43 6
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_4981 Nitrogen regulation protein NR(I) 0.68 Pf6N2E2_5659 Acetyl-coenzyme A synthetase (EC 6.2.1.1) low > 103
Ralstonia solanacearum GMI1000 0.26 RS_RS15720 sigma-54-dependent Fis family transcriptional regulator 0.47 RS_RS09815 acetyl-coenzyme A synthetase low > 80
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_1736 Helix-turn-helix, Fis-type 0.68 Psyr_3572 acetyl-coenzyme A synthetase low > 86
Pseudomonas sp. S08-1 0.26 OH686_03705 sigma-54-dependent transcriptional regulator 0.68 OH686_21250 acetate--CoA ligase low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_1736 Helix-turn-helix, Fis-type 0.68 Psyr_3572 acetyl-coenzyme A synthetase low > 86
Shewanella loihica PV-4 0.26 Shew_3573 Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) 0.67 Shew_1533 acetyl-CoA synthetase (RefSeq) low > 60
Azospirillum sp. SherDot2 0.25 MPMX19_01661 Acetoin catabolism regulatory protein 0.72 MPMX19_02038 Acetyl-coenzyme A synthetase low > 112
Shewanella sp. ANA-3 0.25 Shewana3_0251 Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) 0.68 Shewana3_2523 acetyl-CoA synthetase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_09115 sigma-54-dependent Fis family transcriptional regulator 0.68 CSW01_01520 acetyl-coenzyme A synthetase low > 62
Shewanella oneidensis MR-1 0.24 SO4479 sigma-54 dependent transcriptional regulator (NCBI ptt file) 0.68 SO2743 acs acetyl-coenzyme A synthetase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.24 Sama_3434 sigma-54 dependent transcriptional regulator (RefSeq) 0.69 Sama_2079 acetyl-CoA synthetase (RefSeq) low > 62
Azospirillum brasilense Sp245 0.23 AZOBR_RS04785 ATPase AAA 0.73 AZOBR_RS00270 acetyl-CoA synthetase low > 97
Agrobacterium fabrum C58 0.22 Atu4741 transcriptional regulator 0.70 Atu2745 acetyl-coenzyme A synthetase low > 89
Sinorhizobium meliloti 1021 0.22 SM_b20102 acetoin catabolism regulatory protein 0.70 SMc04093 acetyl-CoA synthetase low > 103
Dinoroseobacter shibae DFL-12 0.14 Dshi_4156 GAF modulated sigma54 specific transcriptional regulator, Fis family (RefSeq) 0.68 Dshi_3553 acetate--CoA ligase (RefSeq) — —

Not shown: 0 genomes with orthologs for TX73_006200 only; 49 genomes with orthologs for TX73_001095 only