Conservation of cofitness between SMc04218 and SMc04228 in Sinorhizobium meliloti 1021

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc04218 transport transmembrane protein 1.0 SMc04228 hypothetical protein 0.36 6
Agrobacterium fabrum C58 0.86 Atu1906 ABC transporter, membrane spanning protein 0.71 Atu1994 acyl-CoA hydrolase low > 89
Rhizobium sp. OAE497 0.81 ABIE40_RS10760 ABC transporter permease 0.75 ABIE40_RS10785 acyl-CoA thioesterase low > 107
Castellaniella sp019104865 MT123 0.71 ABCV34_RS02915 ABC transporter permease 0.40 ABCV34_RS09595 acyl-CoA thioesterase low > 48
Bosea sp. OAE506 0.71 ABIE41_RS06200 ABC transporter permease 0.57 ABIE41_RS12055 acyl-CoA thioesterase low > 77
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_02997 ABC-2 type transport system permease protein 0.44 H281DRAFT_04633 (3S)-malyl-CoA thioesterase low > 103
Paraburkholderia graminis OAS925 0.70 ABIE53_005060 ABC-2 type transport system permease protein 0.42 ABIE53_000793 acyl-CoA thioesterase YciA 0.19 41
Burkholderia phytofirmans PsJN 0.70 BPHYT_RS29970 sugar ABC transporter permease 0.43 BPHYT_RS03270 acyl-CoA hydrolase low > 109
Azospirillum brasilense Sp245 0.69 AZOBR_RS23890 sugar ABC transporter permease 0.41 AZOBR_RS22235 acyl-CoA thioester hydrolase low > 97
Marinobacter adhaerens HP15 0.68 HP15_1735 ABC transporter, permease protein 0.39 HP15_3390 thioesterase superfamily protein low > 73
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS20370 ABC transporter permease 0.42 QEN71_RS02095 acyl-CoA thioesterase low > 153
Rhodanobacter sp. FW510-T8 0.68 OKGIIK_04405 yadH sugar ABC transporter permease 0.30 OKGIIK_13375 Acyl-CoA hydrolase
Caulobacter crescentus NA1000 0.68 CCNA_03482 ABC transporter permease protein 0.41 CCNA_00190 acyl-CoA hydrolase low > 66
Dyella japonica UNC79MFTsu3.2 0.68 ABZR86_RS01310 ABC transporter permease 0.31 ABZR86_RS16210 acyl-CoA thioesterase
Caulobacter crescentus NA1000 Δfur 0.68 CCNA_03482 ABC transporter permease protein 0.41 CCNA_00190 acyl-CoA hydrolase low > 67
Pseudomonas stutzeri RCH2 0.68 Psest_0321 Predicted membrane protein 0.42 Psest_0218 Acyl-CoA hydrolase low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF155 ABC-type multidrug transport system, permease component 0.43 GFF516 Acyl-CoA hydrolase (EC 3.1.2.20) low > 90
Pseudomonas sp. S08-1 0.66 OH686_16800 Efflux ABC transporter, permease protein 0.43 OH686_13400 cytosolic long-chain acyl-CoA thioester hydrolase family protein low > 80
Dinoroseobacter shibae DFL-12 0.65 Dshi_0639 ABC-2 type transporter (RefSeq) 0.55 Dshi_2218 thioesterase superfamily protein (RefSeq) low > 64
Azospirillum sp. SherDot2 0.65 MPMX19_04599 Inner membrane transport permease YadH 0.40 MPMX19_00971 putative acyl-CoA thioester hydrolase low > 112
Brevundimonas sp. GW460-12-10-14-LB2 0.65 A4249_RS10850 ABC transporter permease 0.38 A4249_RS12320 acyl-CoA thioesterase low > 48
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_2704 ABC-type multidrug transport system, permease component 0.43 Ga0059261_3714 Acyl-CoA hydrolase low > 68
Escherichia coli ECOR38 0.37 HEPCGN_08410 Inner membrane transport permease YadH 0.46 HEPCGN_25145 yciA acyl-CoA thioester hydrolase YciA low > 87
Escherichia coli BW25113 0.37 b0128 yadH predicted transporter subunit: membrane component of ABC superfamily (NCBI) 0.46 b1253 yciA predicted hydrolase (NCBI) low > 76
Escherichia fergusonii Becca 0.37 EFB2_03917 Inner membrane transport permease YadH 0.46 EFB2_02672 putative acyl-CoA thioester hydrolase low > 86
Escherichia coli ECRC62 0.37 BNILDI_08895 yadH Inner membrane transport permease YadH 0.46 BNILDI_18515 yciA acyl-CoA thioester hydrolase YciA low > 75
Escherichia coli BL21 0.37 ECD_00127 putative ABC transporter permease 0.46 ECD_01227 acyl-CoA esterase low > 61
Escherichia coli ECRC98 0.37 JDDGAC_14025 yadH Inner membrane transport permease YadH 0.47 JDDGAC_05895 yciA acyl-CoA thioester hydrolase YciA low > 86
Klebsiella michiganensis M5al 0.37 BWI76_RS04970 ABC transporter permease 0.48 BWI76_RS11790 acyl-CoA thioesterase low > 92
Escherichia coli Nissle 1917 0.37 ECOLIN_RS00710 ABC transporter permease 0.46 ECOLIN_RS07565 acyl-CoA thioester hydrolase YciA low > 55
Escherichia coli ECOR27 0.37 NOLOHH_02775 yadH Inner membrane transport permease YadH 0.46 NOLOHH_20370 yciA acyl-CoA thioester hydrolase YciA low > 75
Escherichia coli ECRC102 0.37 NIAGMN_08280 yadH Inner membrane transport permease YadH 0.47 NIAGMN_27555 yciA acyl-CoA thioester hydrolase YciA
Escherichia coli ECRC101 0.37 MCAODC_00945 yadH Inner membrane transport permease YadH 0.47 MCAODC_21580 yciA acyl-CoA thioester hydrolase YciA low > 87
Escherichia coli ECRC100 0.37 OKFHMN_10430 yadH Inner membrane transport permease YadH 0.47 OKFHMN_28680 yciA acyl-CoA thioester hydrolase YciA low > 80
Escherichia coli ECRC99 0.37 KEDOAH_17725 yadH Inner membrane transport permease YadH 0.47 KEDOAH_25675 yciA acyl-CoA thioester hydrolase YciA
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_03533 Inner membrane transport permease YadH 0.46 OHPLBJKB_02430 putative acyl-CoA thioester hydrolase low > 73
Dickeya dianthicola 67-19 0.37 HGI48_RS16085 ABC transporter permease 0.48 HGI48_RS10435 acyl-CoA thioester hydrolase YciA low > 71
Serratia liquefaciens MT49 0.37 IAI46_21260 ABC transporter permease 0.45 IAI46_14085 acyl-CoA thioester hydrolase YciA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF100 ABC-type multidrug transport system, permease component 0.48 GFF2735 Acyl-CoA thioesterase YciA, involved in membrane biogenesis low > 78
Dickeya dianthicola ME23 0.36 DZA65_RS17170 ABC transporter permease 0.48 DZA65_RS10910 acyl-CoA thioester hydrolase YciA low > 75
Pectobacterium carotovorum WPP14 0.36 HER17_RS05545 ABC transporter permease 0.46 HER17_RS10965 acyl-CoA thioester hydrolase YciA low > 75
Enterobacter asburiae PDN3 0.36 EX28DRAFT_3725 ABC-type polysaccharide/polyol phosphate export systems, permease component 0.48 EX28DRAFT_0923 Acyl-CoA hydrolase low > 76
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS02520 ABC transporter permease 0.41 ABZR87_RS07500 acyl-CoA thioesterase low > 80
Enterobacter sp. TBS_079 0.36 MPMX20_00822 Inner membrane transport permease YadH 0.49 MPMX20_02575 putative acyl-CoA thioester hydrolase low > 85
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_03125 ABC transporter permease 0.46 CSW01_08560 acyl-CoA thioester hydrolase YciA low > 62
Dickeya dadantii 3937 0.36 DDA3937_RS15970 ABC transporter permease 0.48 DDA3937_RS10430 acyl-CoA thioester hydrolase YciA low > 74
Pantoea sp. MT58 0.35 IAI47_15675 ABC transporter permease 0.44 IAI47_09135 acyl-CoA thioester hydrolase YciA low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_1631 ABC-2 0.43 Psyr_5043 Thioesterase superfamily low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_1631 ABC-2 0.43 Psyr_5043 Thioesterase superfamily low > 86
Ralstonia solanacearum PSI07 0.34 RPSI07_RS10370 ABC transporter permease 0.41 RPSI07_RS21675 acyl-CoA thioesterase low > 81
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_2081 ABC-type multidrug transport system, permease component 0.43 PfGW456L13_751 cytosolic long-chain acyl-CoA thioester hydrolase family protein low > 87
Pseudomonas simiae WCS417 0.34 PS417_09205 membrane protein 0.44 PS417_28095 long-chain acyl-CoA thioester hydrolase
Pseudomonas fluorescens SBW25 0.34 PFLU_RS09215 ABC transporter permease 0.44 PFLU_RS29780 acyl-CoA thioesterase low > 109
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS09215 ABC transporter permease 0.44 PFLU_RS29780 acyl-CoA thioesterase low > 109
Pseudomonas putida KT2440 0.34 PP_1896 putative ABC transporter - permease subunit 0.43 PP_5331 Long-chain acyl-CoA thioester hydrolase low > 96
Rahnella sp. WP5 0.34 EX31_RS03295 ABC transporter permease 0.47 EX31_RS10010 acyl-CoA thioester hydrolase YciA low > 89
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS18935 metal-dependent hydrolase 0.43 RR42_RS02530 acyl-CoA hydrolase low > 128
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS06865 ABC transporter permease 0.41 RALBFv3_RS11535 acyl-CoA thioesterase low > 76
Ralstonia solanacearum UW163 0.33 UW163_RS06750 ABC transporter permease 0.41 UW163_RS02050 acyl-CoA thioesterase
Pseudomonas sp. RS175 0.33 PFR28_03033 Inner membrane transport permease YadH 0.43 PFR28_04491 putative acyl-CoA thioester hydrolase low > 88
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_01480 hypothetical protein 0.42 AO353_09915 long-chain acyl-CoA thioester hydrolase low > 101
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_475 ABC-type multidrug transport system, permease component 0.43 Pf1N1B4_2032 cytosolic long-chain acyl-CoA thioester hydrolase family protein
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_20050 hypothetical protein 0.42 AO356_11055 long-chain acyl-CoA thioester hydrolase low > 104
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_5928 ABC-type multidrug transport system, permease component 0.42 Pf6N2E2_4077 cytosolic long-chain acyl-CoA thioester hydrolase family protein low > 103
Ralstonia solanacearum GMI1000 0.32 RS_RS14810 ABC transporter permease 0.42 RS_RS02365 acyl-CoA thioesterase low > 80
Dechlorosoma suillum PS 0.31 Dsui_1405 ABC-type polysaccharide/polyol phosphate export systems, permease component 0.48 Dsui_0322 acyl-CoA hydrolase low > 51
Acinetobacter radioresistens SK82 0.31 MPMX26_02104 Inner membrane transport permease YadH 0.45 MPMX26_02646 putative acyl-CoA thioester hydrolase low > 36
Acidovorax sp. GW101-3H11 0.30 Ac3H11_4719 ABC-type multidrug transport system, permease component 0.44 Ac3H11_1945 Acyl-CoA hydrolase (EC 3.1.2.20) low > 79
Variovorax sp. SCN45 0.30 GFF5341 Efflux ABC transporter, permease protein 0.45 GFF4599 Acyl-CoA hydrolase (EC 3.1.2.20) low > 127
Variovorax sp. OAS795 0.29 ABID97_RS23180 ABC transporter permease 0.45 ABID97_RS05905 acyl-CoA thioesterase low > 91
Rhodospirillum rubrum S1H 0.28 Rru_A0640 ABC-2 transporter component (NCBI) 0.51 Rru_A2709 Thioesterase superfamily (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.26 AMB_RS01590 multidrug ABC transporter permease 0.49 AMB_RS16945 acyl-CoA thioesterase low > 64

Not shown: 15 genomes with orthologs for SMc04218 only; 0 genomes with orthologs for SMc04228 only