Conservation of cofitness between SMc03228 and SMc02908 in Sinorhizobium meliloti 1021

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc03228 YciI-like protein 1.0 SMc02908 recombination protein RecR 0.38 3
Rhizobium sp. OAE497 0.78 ABIE40_RS18050 YciI-like protein 0.86 ABIE40_RS00300 recombination mediator RecR low > 107
Agrobacterium fabrum C58 0.63 Atu2649 hypothetical protein 0.91 Atu0093 Recombination protein 0.22 10
Dinoroseobacter shibae DFL-12 0.46 Dshi_3413 YCII-related (RefSeq) 0.56 Dshi_0648 recombination protein RecR (RefSeq) low > 64
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_00067 YciI-like protein 0.59 CCNA_00270 Recombination protein recR low > 67
Caulobacter crescentus NA1000 0.39 CCNA_00067 YciI-like protein 0.59 CCNA_00270 Recombination protein recR low > 66
Azospirillum brasilense Sp245 0.39 AZOBR_RS00285 hypothetical protein 0.65 AZOBR_RS03880 recombinase RecR 0.77 10
Pseudomonas stutzeri RCH2 0.39 Psest_1886 Uncharacterized protein conserved in bacteria 0.38 Psest_2545 recombination protein RecR low > 67
Phaeobacter inhibens DSM 17395 0.38 PGA1_c35470 protein YciI 0.59 PGA1_c30290 recombination protein RecR low > 62
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS38165 YciI family protein 0.36 QEN71_RS22285 recombination mediator RecR low > 153
Pseudomonas sp. RS175 0.36 PFR28_03321 Protein YciI 0.36 PFR28_01077 Recombination protein RecR low > 88
Alteromonas macleodii MIT1002 0.36 MIT1002_01424 YciI-like protein 0.36 MIT1002_02649 Recombination protein RecR low > 70
Pseudomonas simiae WCS417 0.36 PS417_22285 hypothetical protein 0.36 PS417_20800 recombination protein RecR low > 88
Dickeya dianthicola ME23 0.36 DZA65_RS10900 YciI family protein 0.37 DZA65_RS06165 recombination protein RecR low > 75
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_18510 hypothetical protein 0.35 AO353_00675 recombination protein RecR low > 101
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS23925 YciI family protein 0.35 PFLU_RS22415 recombination protein RecR low > 109
Pseudomonas fluorescens SBW25 0.36 PFLU_RS23925 YciI family protein 0.35 PFLU_RS22415 recombination protein RecR low > 109
Pseudomonas sp. S08-1 0.35 OH686_20785 YciL protein 0.35 OH686_02385 recombination protein RecR low > 80
Dickeya dadantii 3937 0.35 DDA3937_RS10420 YciI family protein 0.37 DDA3937_RS05790 recombination protein RecR low > 74
Rahnella sp. WP5 0.35 EX31_RS10020 YciI family protein 0.36 EX31_RS22525 recombination protein RecR low > 89
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3549 YciL protein 0.35 Pf1N1B4_3864 Recombination protein RecR low > 87
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_18485 hypothetical protein 0.36 AO356_02495 recombination protein RecR — —
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_3588 YCII-related protein 0.36 Psyr_3396 DNA replication and repair protein RecR — —
Escherichia coli Nissle 1917 0.35 ECOLIN_RS07555 YciI family protein 0.37 ECOLIN_RS02805 recombination mediator RecR — —
Escherichia coli BW25113 0.35 b1251 yciI orf, hypothetical protein (VIMSS) 0.37 b0472 recR recombination protein RecR (NCBI) low > 76
Escherichia coli BL21 0.35 ECD_01225 putative DGPF domain-containing enzyme 0.37 ECD_00423 gap repair protein low > 60
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_4407 YciL protein 0.35 PfGW456L13_4074 Recombination protein RecR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_02432 Protein YciI 0.37 OHPLBJKB_03202 Recombination protein RecR — —
Escherichia fergusonii Becca 0.35 EFB2_02674 Protein YciI 0.37 EFB2_03586 Recombination protein RecR low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_3588 YCII-related protein 0.36 Psyr_3396 DNA replication and repair protein RecR — —
Dechlorosoma suillum PS 0.34 Dsui_2887 hypothetical protein 0.41 Dsui_1811 recombination protein RecR low > 51
Shewanella loihica PV-4 0.34 Shew_2261 YciI-like protein (RefSeq) 0.40 Shew_2233 recombination protein RecR (RefSeq) low > 60
Dickeya dianthicola 67-19 0.34 HGI48_RS10425 YciI family protein 0.37 HGI48_RS05840 recombination protein RecR — —
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_2302 Uncharacterized protein conserved in bacteria 0.39 B158DRAFT_2480 DNA replication and repair protein RecR low > 40
Escherichia coli ECRC99 0.34 KEDOAH_25665 yciI YciI family protein 0.37 KEDOAH_19810 recR recombination mediator RecR — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF2737 YciL protein 0.37 GFF4390 Recombination protein RecR low > 78
Escherichia coli ECRC102 0.34 NIAGMN_27565 yciI YciI family protein 0.37 NIAGMN_06210 recR recombination mediator RecR — —
Escherichia coli ECRC101 0.34 OKFHMN_28670 yciI YciI family protein 0.37 OKFHMN_08155 recR recombination mediator RecR — —
Escherichia coli ECOR27 0.34 NOLOHH_20380 yciI YciI family protein 0.37 NOLOHH_01085 recR recombination mediator RecR — —
Escherichia coli ECOR38 0.34 HEPCGN_25135 yciI YciI family protein 0.37 HEPCGN_06770 recR recombination mediator RecR low > 85
Escherichia coli ECRC101 0.34 MCAODC_21590 yciI YciI family protein 0.37 MCAODC_27380 recR recombination mediator RecR — —
Escherichia coli ECRC98 0.34 JDDGAC_05905 yciI YciI family protein 0.37 JDDGAC_11805 recR recombination mediator RecR — —
Marinobacter adhaerens HP15 0.33 HP15_2225 YciI-like protein 0.42 HP15_1883 recombination protein RecR — —
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5623 YciL protein 0.36 Pf6N2E2_2325 Recombination protein RecR low > 103
Acinetobacter radioresistens SK82 0.33 MPMX26_02640 Protein YciI 0.44 MPMX26_01643 Recombination protein RecR low > 36
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_08565 hypothetical protein 0.37 CSW01_05375 recombination protein RecR low > 62
Pectobacterium carotovorum WPP14 0.33 HER17_RS10975 YciI family protein 0.36 HER17_RS15695 recombination mediator RecR low > 75
Magnetospirillum magneticum AMB-1 0.33 AMB_RS21125 YciI family protein 0.60 AMB_RS20755 recombination protein RecR low > 64
Rhodanobacter denitrificans MT42 0.32 LRK55_RS18180 YciI family protein 0.40 LRK55_RS01020 recombination mediator RecR low > 63
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS00280 YciI family protein 0.40 LRK54_RS01250 recombination mediator RecR low > 59
Rhodospirillum rubrum S1H 0.32 Rru_A3572 YCII-related (NCBI) 0.59 Rru_A3471 RecR protein (NCBI) — —
Erwinia tracheiphila SCR3 0.32 LU632_RS12835 YciI family protein 0.36 LU632_RS18105 recR recombination mediator RecR low > 74
Serratia liquefaciens MT49 0.32 IAI46_14115 YciI family protein 0.37 IAI46_05240 recombination protein RecR — —
Enterobacter sp. TBS_079 0.32 MPMX20_02577 Protein YciI 0.37 MPMX20_01074 Recombination protein RecR low > 85
Pseudomonas putida KT2440 0.31 PP_4502 putative enzyme 0.34 PP_4267 Recombination protein RecR low > 96
Klebsiella michiganensis M5al 0.31 BWI76_RS17195 hypothetical protein 0.36 BWI76_RS06830 recombination protein RecR low > 92
Shewanella amazonensis SB2B 0.31 Sama_2138 YciI-like protein (RefSeq) 0.38 Sama_1312 recR recombination protein RecR (RefSeq) low > 62
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_07030 YciI family protein 0.41 OKGIIK_05655 recR recombination mediator RecR low > 52
Pantoea sp. MT58 0.30 IAI47_09125 YciI family protein 0.36 IAI47_14465 recombination protein RecR low > 76
Enterobacter asburiae PDN3 0.30 EX28DRAFT_0921 Uncharacterized protein conserved in bacteria 0.37 EX28DRAFT_2485 DNA replication and repair protein RecR low > 76
Shewanella oneidensis MR-1 0.30 SO3036 conserved hypothetical protein (NCBI ptt file) 0.38 SO2015 recR recombination protein RecR (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.30 Shewana3_1504 YciI-like protein (RefSeq) 0.39 Shewana3_2444 recR recombination protein RecR (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.2360.1 YciL protein 0.36 Xcc-8004.4012.1 Recombination protein RecR low > 74
Paraburkholderia graminis OAS925 0.29 ABIE53_006363 uncharacterized protein YciI 0.36 ABIE53_002048 recombination protein RecR low > 113
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS02840 YciI family protein 0.40 ABZR86_RS06235 recombination mediator RecR low > 74
Azospirillum sp. SherDot2 0.29 MPMX19_02041 Protein YciI 0.65 MPMX19_02195 Recombination protein RecR low > 112
Variovorax sp. OAS795 0.29 ABID97_RS29000 YciI family protein 0.39 ABID97_RS14700 recombination mediator RecR low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF1577 YciL protein 0.40 GFF4253 Recombination protein RecR low > 90
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS32875 hypothetical protein 0.37 RR42_RS13270 recombination protein RecR low > 128

Not shown: 0 genomes with orthologs for SMc03228 only; 32 genomes with orthologs for SMc02908 only