Conservation of cofitness between SMc03228 and SMc01877 in Sinorhizobium meliloti 1021

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc03228 YciI-like protein 1.0 SMc01877 DNA repair protein 0.45 1
Agrobacterium fabrum C58 0.63 Atu2649 hypothetical protein 0.81 Atu2083 DNA repair protein RecN 0.19 22
Dinoroseobacter shibae DFL-12 0.46 Dshi_3413 YCII-related (RefSeq) 0.34 Dshi_2413 DNA repair protein RecN (RefSeq) low > 64
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_00067 YciI-like protein 0.32 CCNA_02062 DNA repair protein recN low > 67
Caulobacter crescentus NA1000 0.39 CCNA_00067 YciI-like protein 0.32 CCNA_02062 DNA repair protein recN low > 66
Azospirillum brasilense Sp245 0.39 AZOBR_RS00285 hypothetical protein 0.40 AZOBR_RS12395 DNA repair protein RecN — —
Pseudomonas stutzeri RCH2 0.39 Psest_1886 Uncharacterized protein conserved in bacteria 0.29 Psest_0962 DNA repair protein RecN low > 67
Phaeobacter inhibens DSM 17395 0.38 PGA1_c35470 protein YciI 0.36 PGA1_c09720 DNA repair protein RecN low > 62
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS38165 YciI family protein 0.25 QEN71_RS26535 DNA repair protein RecN low > 153
Pseudomonas sp. RS175 0.36 PFR28_03321 Protein YciI 0.30 PFR28_00071 DNA repair protein RecN low > 88
Pseudomonas simiae WCS417 0.36 PS417_22285 hypothetical protein 0.29 PS417_24070 recombination and repair protein low > 88
Alteromonas macleodii MIT1002 0.36 MIT1002_01424 YciI-like protein 0.26 MIT1002_01443 Recombination protein N low > 70
Pseudomonas fluorescens SBW25 0.36 PFLU_RS23925 YciI family protein 0.30 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_18510 hypothetical protein 0.29 AO353_05660 DNA repair protein RecN low > 101
Dickeya dianthicola ME23 0.36 DZA65_RS10900 YciI family protein 0.27 DZA65_RS04235 DNA repair protein RecN low > 75
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS23925 YciI family protein 0.30 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas sp. S08-1 0.35 OH686_20785 YciL protein 0.30 OH686_17050 DNA repair protein RecN low > 80
Dickeya dadantii 3937 0.35 DDA3937_RS10420 YciI family protein 0.27 DDA3937_RS04325 DNA repair protein RecN low > 74
Rahnella sp. WP5 0.35 EX31_RS10020 YciI family protein 0.29 EX31_RS21760 DNA repair protein RecN low > 89
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3549 YciL protein 0.30 Pf1N1B4_1178 DNA repair protein RecN low > 87
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_18485 hypothetical protein 0.29 AO356_07510 DNA repair protein RecN — —
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_3588 YCII-related protein 0.31 Psyr_4197 DNA replication and repair protein RecN — —
Escherichia fergusonii Becca 0.35 EFB2_02674 Protein YciI 0.28 EFB2_01277 DNA repair protein RecN low > 86
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_4407 YciL protein 0.31 PfGW456L13_5106 DNA repair protein RecN low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_02432 Protein YciI 0.28 OHPLBJKB_01091 DNA repair protein RecN — —
Escherichia coli Nissle 1917 0.35 ECOLIN_RS07555 YciI family protein 0.28 ECOLIN_RS14775 DNA repair protein RecN — —
Escherichia coli BW25113 0.35 b1251 yciI orf, hypothetical protein (VIMSS) 0.28 b2616 recN recombination and repair protein (NCBI) low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_3588 YCII-related protein 0.31 Psyr_4197 DNA replication and repair protein RecN — —
Escherichia coli BL21 0.35 ECD_01225 putative DGPF domain-containing enzyme 0.28 ECD_02504 recombination and repair protein low > 60
Shewanella loihica PV-4 0.34 Shew_2261 YciI-like protein (RefSeq) 0.29 Shew_1196 recombination and repair protein (RefSeq) low > 60
Dechlorosoma suillum PS 0.34 Dsui_2887 hypothetical protein 0.29 Dsui_3072 DNA repair protein RecN low > 51
Dickeya dianthicola 67-19 0.34 HGI48_RS10425 YciI family protein 0.27 HGI48_RS04320 DNA repair protein RecN low > 71
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_2302 Uncharacterized protein conserved in bacteria 0.29 B158DRAFT_0601 DNA replication and repair protein RecN low > 40
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF2737 YciL protein 0.28 GFF4162 DNA repair protein RecN low > 78
Escherichia coli ECRC98 0.34 JDDGAC_05905 yciI YciI family protein 0.28 JDDGAC_24810 recN DNA repair protein RecN — —
Escherichia coli ECRC102 0.34 NIAGMN_27565 yciI YciI family protein 0.28 NIAGMN_18915 recN DNA repair protein RecN — —
Escherichia coli ECRC99 0.34 KEDOAH_25665 yciI YciI family protein 0.28 KEDOAH_07075 recN DNA repair protein RecN — —
Escherichia coli ECOR38 0.34 HEPCGN_25135 yciI YciI family protein 0.28 HEPCGN_20265 recN DNA repair protein RecN low > 85
Escherichia coli ECOR27 0.34 NOLOHH_20380 yciI YciI family protein 0.28 NOLOHH_12815 recN DNA repair protein RecN — —
Escherichia coli ECRC101 0.34 MCAODC_21590 yciI YciI family protein 0.28 MCAODC_11670 recN DNA repair protein RecN — —
Escherichia coli ECRC101 0.34 OKFHMN_28670 yciI YciI family protein 0.28 OKFHMN_21145 recN DNA repair protein RecN — —
Marinobacter adhaerens HP15 0.33 HP15_2225 YciI-like protein 0.34 HP15_3084 DNA repair protein RecN low > 73
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5623 YciL protein 0.30 Pf6N2E2_3370 DNA repair protein RecN low > 103
Acinetobacter radioresistens SK82 0.33 MPMX26_02640 Protein YciI 0.22 MPMX26_00239 DNA repair protein RecN low > 36
Pectobacterium carotovorum WPP14 0.33 HER17_RS10975 YciI family protein 0.27 HER17_RS17420 DNA repair protein RecN low > 75
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_08565 hypothetical protein 0.29 CSW01_04395 DNA repair protein RecN low > 62
Magnetospirillum magneticum AMB-1 0.33 AMB_RS21125 YciI family protein 0.41 AMB_RS19520 DNA repair protein RecN — —
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS00280 YciI family protein 0.26 LRK54_RS17960 DNA repair protein RecN low > 59
Rhodanobacter denitrificans MT42 0.32 LRK55_RS18180 YciI family protein 0.26 LRK55_RS17815 DNA repair protein RecN low > 63
Rhodospirillum rubrum S1H 0.32 Rru_A3572 YCII-related (NCBI) 0.35 Rru_A0940 DNA repair protein RecN (NCBI) — —
Serratia liquefaciens MT49 0.32 IAI46_14115 YciI family protein 0.28 IAI46_19635 DNA repair protein RecN — —
Erwinia tracheiphila SCR3 0.32 LU632_RS12835 YciI family protein 0.28 LU632_RS16985 recN DNA repair protein RecN low > 74
Enterobacter sp. TBS_079 0.32 MPMX20_02577 Protein YciI 0.29 MPMX20_03486 DNA repair protein RecN low > 85
Pseudomonas putida KT2440 0.31 PP_4502 putative enzyme 0.29 PP_4729 factor used in recombination and DNA repair low > 96
Klebsiella michiganensis M5al 0.31 BWI76_RS17195 hypothetical protein 0.29 BWI76_RS21560 DNA repair protein RecN low > 92
Shewanella amazonensis SB2B 0.31 Sama_2138 YciI-like protein (RefSeq) 0.29 Sama_1026 recombination and repair protein (RefSeq) low > 62
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_07030 YciI family protein 0.26 OKGIIK_07340 recN DNA repair protein RecN low > 52
Pantoea sp. MT58 0.30 IAI47_09125 YciI family protein 0.29 IAI47_04810 DNA repair protein RecN low > 76
Enterobacter asburiae PDN3 0.30 EX28DRAFT_0921 Uncharacterized protein conserved in bacteria 0.29 EX28DRAFT_2719 DNA repair protein RecN low > 76
Shewanella oneidensis MR-1 0.30 SO3036 conserved hypothetical protein (NCBI ptt file) 0.29 SO3462 recN DNA repair protein RecN (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.30 Shewana3_1504 YciI-like protein (RefSeq) 0.28 Shewana3_1104 recombination and repair protein (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.2360.1 YciL protein 0.27 Xcc-8004.3431.1 DNA repair protein RecN low > 74
Paraburkholderia graminis OAS925 0.29 ABIE53_006363 uncharacterized protein YciI 0.24 ABIE53_000856 DNA repair protein RecN (Recombination protein N) low > 113
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS02840 YciI family protein 0.27 ABZR86_RS05665 DNA repair protein RecN low > 74
Azospirillum sp. SherDot2 0.29 MPMX19_02041 Protein YciI 0.40 MPMX19_01601 DNA repair protein RecN low > 112
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF1577 YciL protein 0.27 GFF829 DNA repair protein RecN low > 90
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS32875 hypothetical protein 0.29 RR42_RS05910 DNA repair protein low > 128

Not shown: 2 genomes with orthologs for SMc03228 only; 33 genomes with orthologs for SMc01877 only