| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Sinorhizobium meliloti 1021 | 1.0 | SMc00770 | | putrescine-binding periplasmic protein | 1.0 | SMc00773 | | putrescine ABC transporter permease | 0.50 | 3 |
| Rhizobium sp. OAE497 | 0.77 | ABIE40_RS03265 | | polyamine ABC transporter substrate-binding protein | 0.83 | ABIE40_RS03280 | | ABC transporter permease subunit | low | > 107 |
| Rhodopseudomonas palustris CGA009 | 0.61 | TX73_010380 | | polyamine ABC transporter substrate-binding protein | 0.65 | TX73_021555 | | ABC transporter permease subunit | 0.53 | 5 |
| Agrobacterium fabrum C58 | 0.61 | Atu0609 | | ABC transporter, substrate binding protein (putrescine) | 0.73 | Atu0612 | | ABC transporter, membrane spanning protein | 0.37 | 3 |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_4284 | | Spermidine/putrescine-binding periplasmic protein | 0.49 | Psest_4280 | | ABC-type spermidine/putrescine transport system, permease component II | 0.67 | 3 |
| Phaeobacter inhibens DSM 17395 | 0.55 | PGA1_c34420 | | putrescine-binding periplasmic protein PotF | 0.64 | PGA1_c34450 | | putrescine transport system permease protein PotI | 0.68 | 1 |
| Shewanella amazonensis SB2B | 0.54 | Sama_2642 | | polyamine ABC transporter, periplasmic polyamine-binding protein (RefSeq) | 0.52 | Sama_2639 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.94 | 3 |
| Pseudomonas fluorescens GW456-L13 | 0.54 | PfGW456L13_929 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | 0.46 | PfGW456L13_932 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | 0.51 | 7 |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_4514 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | 0.46 | Pf6N2E2_4517 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | 0.73 | 9 |
| Rahnella sp. WP5 | 0.54 | EX31_RS09630 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.53 | EX31_RS09615 | | putrescine ABC transporter permease PotI | 0.33 | 31 |
| Pseudomonas fluorescens FW300-N1B4 | 0.53 | Pf1N1B4_2260 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | 0.47 | Pf1N1B4_4350 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | 0.22 | 86 |
| Bosea sp. OAE506 | 0.53 | ABIE41_RS21650 | | polyamine ABC transporter substrate-binding protein | 0.59 | ABIE41_RS21635 | | ABC transporter permease subunit | low | > 77 |
| Pseudomonas sp. RS175 | 0.53 | PFR28_04294 | | Spermidine-binding periplasmic protein SpuE | 0.48 | PFR28_04291 | | Inner membrane ABC transporter permease protein YdcV | 0.51 | 37 |
| Pseudomonas sp. S08-1 | 0.53 | OH686_11465 | | Putrescine ABC transporter putrescine-binding protein PotF | 0.49 | OH686_11445 | | Putrescine transport system permease protein PotI | 0.72 | 24 |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_13160 | | putrescine ABC transporter, substrate-binding component (from data) | 0.46 | AO356_13175 | | spermidine/putrescine ABC transporter permease | 0.85 | 6 |
| Pseudomonas syringae pv. syringae B728a | 0.53 | Psyr_4864 | | extracellular solute-binding protein, family 1 | 0.47 | Psyr_4861 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS09460 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.50 | DDA3937_RS09475 | | putrescine ABC transporter permease PotI | 0.62 | 5 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.53 | Psyr_4864 | | extracellular solute-binding protein, family 1 | 0.47 | Psyr_4861 | | Binding-protein-dependent transport systems inner membrane component | low | > 86 |
| Pseudomonas putida KT2440 | 0.53 | PP_5180 | | spermidine/putrescine ABC transporter - periplasmic subunit | 0.47 | PP_5177 | | spermidine/putrescine ABC transporter - permease subunit | 0.58 | 4 |
| Shewanella oneidensis MR-1 | 0.53 | SO1270 | | polyamine ABC transporter, periplasmic polyamine-binding protein (NCBI ptt file) | 0.53 | SO1273 | | polyamine ABC transporter, permease protein (NCBI ptt file) | 0.96 | 1 |
| Shewanella sp. ANA-3 | 0.53 | Shewana3_3097 | | extracellular solute-binding protein (RefSeq) | 0.53 | Shewana3_3094 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.84 | 3 |
| Pectobacterium carotovorum WPP14 | 0.52 | HER17_RS12500 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.51 | HER17_RS12485 | | putrescine ABC transporter permease PotI | low | > 75 |
| Dickeya dianthicola ME23 | 0.52 | DZA65_RS09790 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.50 | DZA65_RS09805 | | putrescine ABC transporter permease PotI | low | > 75 |
| Pseudomonas simiae WCS417 | 0.52 | PS417_27120 | | ABC transporter substrate-binding protein | 0.47 | PS417_27105 | | spermidine/putrescine ABC transporter permease | 0.62 | 2 |
| Enterobacter asburiae PDN3 | 0.52 | EX28DRAFT_2099 | | Spermidine/putrescine-binding periplasmic protein | 0.54 | EX28DRAFT_2096 | | ABC-type spermidine/putrescine transport system, permease component II | low | > 76 |
| Enterobacter sp. TBS_079 | 0.52 | MPMX20_01495 | | Putrescine-binding periplasmic protein | 0.54 | MPMX20_01498 | | Inner membrane ABC transporter permease protein YdcV | 0.49 | 2 |
| Klebsiella michiganensis M5al | 0.52 | BWI76_RS09460 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.52 | BWI76_RS09475 | | putrescine ABC transporter permease PotI | low | > 92 |
| Dickeya dianthicola 67-19 | 0.52 | HGI48_RS09480 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.50 | HGI48_RS09495 | | putrescine ABC transporter permease PotI | low | > 71 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.52 | Xcc-8004.2206.1 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | 0.51 | Xcc-8004.2212.1 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 74 |
| Pseudomonas fluorescens SBW25 | 0.52 | PFLU_RS28770 | | polyamine ABC transporter substrate-binding protein | 0.46 | PFLU_RS28755 | | ABC transporter permease subunit | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.52 | PFLU_RS28770 | | polyamine ABC transporter substrate-binding protein | 0.46 | PFLU_RS28755 | | ABC transporter permease subunit | 0.43 | 1 |
| Pseudomonas fluorescens FW300-N2E3 | 0.52 | AO353_08575 | | ABC transporter substrate-binding protein | 0.47 | AO353_08560 | | spermidine/putrescine ABC transporter permease | low | > 101 |
| Pantoea sp. MT58 | 0.51 | IAI47_13045 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.51 | IAI47_13030 | | putrescine ABC transporter permease PotI | 0.35 | 18 |
| Rhodospirillum rubrum S1H | 0.51 | Rru_A1018 | | extracellular solute-binding protein, family 1 (NCBI) | 0.57 | Rru_A1015 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | 0.83 | 3 |
| Escherichia coli BW25113 | 0.51 | b0854 | potF | putrescine transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) | 0.50 | b0857 | potI | putrescine transporter subunit: membrane component of ABC superfamily (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.50 | EFB2_03207 | | Putrescine-binding periplasmic protein | 0.50 | EFB2_03204 | | Inner membrane ABC transporter permease protein YdcV | low | > 86 |
| Escherichia coli BL21 | 0.50 | ECD_00859 | | putrescine ABC transporter periplasmic binding protein | 0.49 | ECD_00862 | | putrescine ABC transporter permease | low | > 60 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_02814 | | Putrescine-binding periplasmic protein | 0.49 | OHPLBJKB_02811 | | Inner membrane ABC transporter permease protein YdcV | low | > 73 |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_04005 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.50 | NIAGMN_03990 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECRC62 | 0.50 | BNILDI_20585 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.50 | BNILDI_20570 | potH | putrescine ABC transporter permease PotH | — | — |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_22330 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.50 | NOLOHH_22315 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECRC101 | 0.50 | OKFHMN_05960 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.50 | OKFHMN_05945 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_02070 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.49 | HEPCGN_02085 | potI | putrescine ABC transporter permease PotI | low | > 85 |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS04550 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.50 | ECOLIN_RS04565 | | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECRC101 | 0.50 | MCAODC_25175 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.50 | MCAODC_25160 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_09595 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.50 | JDDGAC_09580 | potI | putrescine ABC transporter permease PotI | — | — |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_21950 | potF | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.50 | KEDOAH_21965 | potI | putrescine ABC transporter permease PotI | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF758 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | 0.53 | GFF761 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | low | > 78 |
| Shewanella loihica PV-4 | 0.50 | Shew_0973 | | extracellular solute-binding protein (RefSeq) | 0.50 | Shew_0976 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 60 |
| Serratia liquefaciens MT49 | 0.50 | IAI46_08370 | | spermidine/putrescine ABC transporter substrate-binding protein PotF | 0.54 | IAI46_08385 | | putrescine ABC transporter permease PotI | low | > 86 |
| Marinobacter adhaerens HP15 | 0.49 | HP15_940 | | putrescine ABC transporter, periplasmic putrescine-binding protein | 0.52 | HP15_937 | | spermidine/putrescine ABC transporter, permease protein | low | > 73 |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS26645 | | ABC transporter substrate-binding protein | 0.53 | BPHYT_RS23135 | | putrescine/spermidine ABC transporter permease | — | — |
| Castellaniella sp019104865 MT123 | 0.46 | ABCV34_RS02360 | | polyamine ABC transporter substrate-binding protein | 0.48 | ABCV34_RS02375 | | ABC transporter permease subunit | low | > 48 |
| Magnetospirillum magneticum AMB-1 | 0.46 | AMB_RS13210 | | polyamine ABC transporter substrate-binding protein | 0.56 | AMB_RS13195 | | putrescine ABC transporter permease PotI | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS07120 | | polyamine ABC transporter substrate-binding protein | 0.52 | QEN71_RS07135 | | ABC transporter permease subunit | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.44 | H281DRAFT_05180 | | putrescine transport system substrate-binding protein | 0.48 | H281DRAFT_05183 | | putrescine transport system permease protein | low | > 103 |
| Azospirillum brasilense Sp245 | 0.39 | AZOBR_RS08845 | | ABC transporter substrate-binding protein | 0.60 | AZOBR_RS08830 | | putrescine/spermidine ABC transporter permease | low | > 97 |
| Azospirillum sp. SherDot2 | 0.37 | MPMX19_04883 | | Spermidine-binding periplasmic protein SpuE | 0.62 | MPMX19_04880 | | Inner membrane ABC transporter permease protein YdcV | 0.41 | 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.32 | GFF2035 | | Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) | 0.40 | GFF2032 | | Putrescine transport system permease protein PotI (TC 3.A.1.11.2) | 0.98 | 3 |
| Desulfovibrio vulgaris Miyazaki F | 0.26 | DvMF_1957 | | extracellular solute-binding protein family 1 (RefSeq) | 0.40 | DvMF_1958 | potC | spermidine/putrescine ABC transporter membrane protein (RefSeq) | 0.27 | 43 |
| Vibrio cholerae E7946 ATCC 55056 | 0.26 | CSW01_07140 | | spermidine/putrescine ABC transporter substrate-binding protein | 0.42 | CSW01_07150 | | spermidine/putrescine ABC transporter permease PotC | low | > 62 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.25 | DVU0095 | potD-1 | polyamine ABC transporter, periplasmic polyamine-binding protein (TIGR) | 0.42 | DVU0096 | potC | polyamine ABC transporter, permease protein (TIGR) | low | > 55 |
| Fusobacterium nucleatum SB010 | 0.22 | HUW76_06130 | | extracellular solute-binding protein | 0.38 | HUW76_00740 | | ABC transporter permease | 0.99 | 3 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.18 | BT1288 | | spermidine/putrescine ABC transporter (NCBI ptt file) | 0.31 | BT1289 | | putrescine transport system permease protein potI (NCBI ptt file) | 0.19 | 30 |
| Bacteroides stercoris CC31F | 0.18 | HMPREF1181_RS12435 | | ABC transporter substrate-binding protein | 0.33 | HMPREF1181_RS12430 | | ABC transporter permease | low | > 56 |
| Bacteroides ovatus ATCC 8483 | 0.17 | BACOVA_00085 | | ABC transporter, solute-binding protein | 0.30 | BACOVA_00084 | | ABC transporter, permease protein | 0.63 | 3 |
| Dinoroseobacter shibae DFL-12 | 0.08 | Dshi_2123 | | extracellular solute-binding protein family 1 (RefSeq) | 0.24 | Dshi_1598 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 64 |
Not shown: 3 genomes with orthologs for SMc00770 only; 4 genomes with orthologs for SMc00773 only