Conservation of cofitness between SMc03228 and SMc00760 in Sinorhizobium meliloti 1021

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc03228 YciI-like protein 1.0 SMc00760 recombinase A 0.35 8
Rhizobium sp. OAE497 0.78 ABIE40_RS18050 YciI-like protein 0.94 ABIE40_RS10320 recombinase RecA low > 107
Agrobacterium fabrum C58 0.63 Atu2649 hypothetical protein 0.93 Atu1874 RecA protein 0.27 3
Dinoroseobacter shibae DFL-12 0.46 Dshi_3413 YCII-related (RefSeq) 0.70 Dshi_1643 recA protein (RefSeq) low > 64
Caulobacter crescentus NA1000 0.39 CCNA_00067 YciI-like protein 0.71 CCNA_01141 RecA protein low > 66
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_00067 YciI-like protein 0.71 CCNA_01141 RecA protein — —
Azospirillum brasilense Sp245 0.39 AZOBR_RS00285 hypothetical protein 0.79 AZOBR_RS11095 recombinase RecA 0.63 18
Pseudomonas stutzeri RCH2 0.39 Psest_1886 Uncharacterized protein conserved in bacteria 0.67 Psest_2872 protein RecA low > 67
Phaeobacter inhibens DSM 17395 0.38 PGA1_c35470 protein YciI 0.74 PGA1_c15260 protein recA (recombinase A) low > 62
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS38165 YciI family protein 0.69 QEN71_RS02335 recombinase RecA — —
Pseudomonas sp. RS175 0.36 PFR28_03321 Protein YciI 0.66 PFR28_00472 Protein RecA 0.14 56
Alteromonas macleodii MIT1002 0.36 MIT1002_01424 YciI-like protein 0.68 MIT1002_00955 Recombinase A low > 70
Pseudomonas simiae WCS417 0.36 PS417_22285 hypothetical protein 0.66 PS417_05815 recombinase RecA low > 88
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS23925 YciI family protein 0.66 PFLU_RS05885 recombinase RecA low > 109
Pseudomonas fluorescens SBW25 0.36 PFLU_RS23925 YciI family protein 0.66 PFLU_RS05885 recombinase RecA low > 109
Dickeya dianthicola ME23 0.36 DZA65_RS10900 YciI family protein 0.66 DZA65_RS17450 recombinase RecA — —
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_18510 hypothetical protein 0.65 AO353_16805 recombinase RecA low > 101
Pseudomonas sp. S08-1 0.35 OH686_20785 YciL protein 0.67 OH686_18205 protein RecA low > 80
Rahnella sp. WP5 0.35 EX31_RS10020 YciI family protein 0.65 EX31_RS07800 recombinase RecA low > 89
Dickeya dadantii 3937 0.35 DDA3937_RS10420 YciI family protein 0.66 DDA3937_RS16245 recombinase RecA low > 74
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_18485 hypothetical protein 0.66 AO356_05670 recombinase RecA — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3549 YciL protein 0.65 Pf1N1B4_3143 RecA protein low > 87
Escherichia coli Nissle 1917 0.35 ECOLIN_RS07555 YciI family protein 0.66 ECOLIN_RS15060 recombinase RecA — —
Escherichia fergusonii Becca 0.35 EFB2_02674 Protein YciI 0.66 EFB2_01225 Protein RecA low > 86
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_3588 YCII-related protein 0.66 Psyr_1378 RecA protein — —
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_4407 YciL protein 0.65 PfGW456L13_4668 RecA protein low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_02432 Protein YciI 0.66 OHPLBJKB_01035 Protein RecA — —
Escherichia coli BW25113 0.35 b1251 yciI orf, hypothetical protein (VIMSS) 0.66 b2699 recA recombinase A (NCBI) low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_3588 YCII-related protein 0.66 Psyr_1378 RecA protein — —
Escherichia coli BL21 0.35 ECD_01225 putative DGPF domain-containing enzyme 0.66 ECD_02549 DNA recombination and repair protein; ssDNA-dependent ATPase; synaptase; ssDNA and dsDNA binding protein; ATP-dependent homologous DNA strand exchanger; recombinase A; LexA autocleavage cofactor low > 60
Dechlorosoma suillum PS 0.34 Dsui_2887 hypothetical protein 0.64 Dsui_0707 protein RecA low > 51
Shewanella loihica PV-4 0.34 Shew_2261 YciI-like protein (RefSeq) 0.66 Shew_1215 recA recombinase A (RefSeq) low > 60
Dickeya dianthicola 67-19 0.34 HGI48_RS10425 YciI family protein 0.65 HGI48_RS16355 recombinase RecA 0.37 31
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_2302 Uncharacterized protein conserved in bacteria 0.68 B158DRAFT_1531 protein RecA low > 40
Escherichia coli ECOR27 0.34 NOLOHH_20380 yciI YciI family protein 0.66 NOLOHH_12545 recA recombinase RecA — —
Escherichia coli ECRC102 0.34 NIAGMN_27565 yciI YciI family protein 0.66 NIAGMN_18475 recA recombinase RecA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF2737 YciL protein 0.66 GFF4693 RecA protein — —
Escherichia coli ECRC98 0.34 JDDGAC_05905 yciI YciI family protein 0.66 JDDGAC_24370 recA recombinase RecA — —
Escherichia coli ECOR38 0.34 HEPCGN_25135 yciI YciI family protein 0.66 HEPCGN_19900 recA recombinase RecA low > 85
Escherichia coli ECRC101 0.34 OKFHMN_28670 yciI YciI family protein 0.66 OKFHMN_20705 recA recombinase RecA — —
Escherichia coli ECRC99 0.34 KEDOAH_25665 yciI YciI family protein 0.66 KEDOAH_07430 recA recombinase RecA — —
Escherichia coli ECRC101 0.34 MCAODC_21590 yciI YciI family protein 0.66 MCAODC_11230 recA recombinase RecA — —
Marinobacter adhaerens HP15 0.33 HP15_2225 YciI-like protein 0.66 HP15_1048 recombinase A low > 73
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5623 YciL protein 0.66 Pf6N2E2_2993 RecA protein — —
Acinetobacter radioresistens SK82 0.33 MPMX26_02640 Protein YciI 0.67 MPMX26_01308 Protein RecA low > 36
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_08565 hypothetical protein 0.66 CSW01_02875 DNA recombination/repair protein RecA low > 62
Pectobacterium carotovorum WPP14 0.33 HER17_RS10975 YciI family protein 0.65 HER17_RS05045 recombinase RecA low > 75
Magnetospirillum magneticum AMB-1 0.33 AMB_RS21125 YciI family protein 0.79 AMB_RS03205 DNA recombination/repair protein RecA low > 64
Rhodanobacter denitrificans MT42 0.32 LRK55_RS18180 YciI family protein 0.67 LRK55_RS14695 recombinase RecA low > 63
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS00280 YciI family protein 0.67 LRK54_RS14980 recombinase RecA low > 59
Rhodospirillum rubrum S1H 0.32 Rru_A3572 YCII-related (NCBI) 0.80 Rru_A2819 RecA DNA recombination protein (NCBI) — —
Erwinia tracheiphila SCR3 0.32 LU632_RS12835 YciI family protein 0.67 LU632_RS15735 recA recombinase RecA low > 74
Serratia liquefaciens MT49 0.32 IAI46_14115 YciI family protein 0.65 IAI46_03840 recombinase RecA — —
Enterobacter sp. TBS_079 0.32 MPMX20_02577 Protein YciI 0.66 MPMX20_03580 Protein RecA low > 85
Pseudomonas putida KT2440 0.31 PP_4502 putative enzyme 0.65 PP_1629 Protein RecA low > 96
Klebsiella michiganensis M5al 0.31 BWI76_RS17195 hypothetical protein 0.65 BWI76_RS22180 recombinase RecA — —
Shewanella amazonensis SB2B 0.31 Sama_2138 YciI-like protein (RefSeq) 0.66 Sama_1046 recA recombinase A (RefSeq) low > 62
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_07030 YciI family protein 0.67 OKGIIK_03740 recA recombinase RecA low > 52
Pantoea sp. MT58 0.30 IAI47_09125 YciI family protein 0.66 IAI47_04300 recombinase RecA low > 76
Enterobacter asburiae PDN3 0.30 EX28DRAFT_0921 Uncharacterized protein conserved in bacteria 0.66 EX28DRAFT_2785 protein RecA — —
Shewanella oneidensis MR-1 0.30 SO3036 conserved hypothetical protein (NCBI ptt file) 0.65 SO3430 recA recA protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.30 Shewana3_1504 YciI-like protein (RefSeq) 0.65 Shewana3_1126 recA recombinase A (RefSeq) low > 73
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.2360.1 YciL protein 0.65 Xcc-8004.3111.1 RecA protein — —
Paraburkholderia graminis OAS925 0.29 ABIE53_006363 uncharacterized protein YciI 0.69 ABIE53_003448 recombination protein RecA low > 113
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS02840 YciI family protein 0.64 ABZR86_RS00660 recombinase RecA low > 74
Azospirillum sp. SherDot2 0.29 MPMX19_02041 Protein YciI 0.80 MPMX19_00869 Protein RecA — —
Variovorax sp. OAS795 0.29 ABID97_RS29000 YciI family protein 0.67 ABID97_RS02275 recombinase RecA low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF1577 YciL protein 0.65 GFF2500 RecA protein low > 90
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS32875 hypothetical protein 0.65 RR42_RS03080 recombinase RecA low > 128

Not shown: 0 genomes with orthologs for SMc03228 only; 32 genomes with orthologs for SMc00760 only