Conservation of cofitness between RR42_RS31760 and RR42_RS36990 in Cupriavidus basilensis FW507-4G11

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS31760 IclR family transcriptional regulator 1.0 RR42_RS36990 hemolysin III 0.44 3
Acidovorax sp. GW101-3H11 0.37 Ac3H11_3905 Ferrichrome-iron receptor 0.55 Ac3H11_4296 COG1272: Predicted membrane protein hemolysin III homolog low > 79
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS02745 TonB-dependent siderophore receptor 0.39 LRK54_RS06145 hemolysin III family protein low > 59
Rhodanobacter denitrificans MT42 0.24 LRK55_RS02500 TonB-dependent siderophore receptor 0.39 LRK55_RS05890 hemolysin III family protein low > 63
Variovorax sp. OAS795 0.24 ABID97_RS23370 TonB-dependent siderophore receptor 0.44 ABID97_RS07605 hemolysin III family protein 0.31 79
Pseudomonas simiae WCS417 0.23 PS417_00680 TonB-dependent receptor 0.59 PS417_26570 hemolysin III low > 88
Rhodopseudomonas palustris CGA009 0.23 TX73_019885 TonB-dependent siderophore receptor 0.24 TX73_008140 hemolysin III family protein low > 86
Agrobacterium fabrum C58 0.23 Atu4022 hydroxamate-type ferrisiderophore receptor 0.22 Atu0906 Hemolysin III low > 89
Pseudomonas stutzeri RCH2 0.22 Psest_0380 TonB-dependent siderophore receptor 0.60 Psest_3779 channel protein, hemolysin III family low > 67
Lysobacter sp. OAE881 0.22 ABIE51_RS00595 TonB-dependent siderophore receptor 0.40 ABIE51_RS16230 hemolysin III family protein low > 62
Azospirillum brasilense Sp245 0.22 AZOBR_RS26605 TonB-denpendent receptor 0.22 AZOBR_RS18955 DNA-binding protein low > 97
Variovorax sp. SCN45 0.22 GFF5295 Ferrichrome-iron receptor 0.42 GFF727 FIG01964566: Predicted membrane protein, hemolysin III homolog low > 127
Paraburkholderia graminis OAS925 0.21 ABIE53_001694 iron complex outermembrane receptor protein 0.66 ABIE53_003461 hemolysin III low > 113
Marinobacter adhaerens HP15 0.21 HP15_3673 ferrichrome outer membrane transporter 0.45 HP15_2974 channel protein, hemolysin III family low > 73
Serratia liquefaciens MT49 0.21 IAI46_21185 ferrichrome porin FhuA 0.32 IAI46_20775 hemolysin III family protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_1636 Ferrichrome-iron receptor 0.59 Pf6N2E2_4629 COG1272: Predicted membrane protein hemolysin III homolog low > 103
Pectobacterium carotovorum WPP14 0.20 HER17_RS17620 TonB-dependent siderophore receptor 0.31 HER17_RS17935 hemolysin III family protein low > 75
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_04924 iron complex outermembrane recepter protein 0.66 H281DRAFT_04221 hemolysin III low > 103
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS30735 TonB-dependent siderophore receptor 0.66 QEN71_RS02270 hemolysin III family protein 0.31 121
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS12695 TonB-dependent siderophore receptor 0.59 PFLU_RS28225 hemolysin III family protein 0.11 103
Pseudomonas fluorescens SBW25 0.20 PFLU_RS12695 TonB-dependent siderophore receptor 0.59 PFLU_RS28225 hemolysin III family protein low > 109
Pseudomonas sp. RS175 0.20 PFR28_04773 Ferrichrome outer membrane transporter/phage receptor 0.59 PFR28_04213 hypothetical protein low > 88
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS20275 TonB-denpendent receptor 0.67 BPHYT_RS16440 hemolysin D low > 109
Rhizobium sp. OAE497 0.20 ABIE40_RS21735 TonB-dependent siderophore receptor 0.23 ABIE40_RS04960 hemolysin III family protein low > 107
Dickeya dadantii 3937 0.20 DDA3937_RS14700 TonB-dependent siderophore receptor 0.31 DDA3937_RS03270 hemolysin III family protein low > 74
Pseudomonas sp. S08-1 0.20 OH686_01055 Ferrichrome-iron receptor 0.59 OH686_06045 Predicted membrane protein, hemolysin III-related low > 80
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_14070 TonB-dependent receptor 0.60 AO356_13560 hemolysin III low > 104
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_1813 Ferrichrome-iron receptor 0.58 Pf1N1B4_2371 COG1272: Predicted membrane protein hemolysin III homolog low > 87
Pseudomonas putida KT2440 0.19 PP_3155 putative Outer membrane ferric siderophore receptor 0.61 PP_4986 Channel protein, hemolysin III family low > 96
Klebsiella michiganensis M5al 0.19 BWI76_RS05125 ferrichrome porin FhuA 0.33 BWI76_RS23840 hemolysin III family protein low > 92
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_3124 TonB-dependent siderophore receptor 0.60 Psyr_0452 HylII low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_3124 TonB-dependent siderophore receptor 0.60 Psyr_0452 HylII low > 86
Sinorhizobium meliloti 1021 0.18 SMc01611 ferrichrome receptor precursor protein 0.23 SMc00455 hypothetical protein low > 103
Enterobacter sp. TBS_079 0.18 MPMX20_00608 Ferrichrome outer membrane transporter/phage receptor 0.33 MPMX20_03758 hypothetical protein low > 85
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_05095 TonB-dependent receptor 0.59 AO353_08075 hemolysin III low > 101
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF4258 Ferrichrome-iron receptor 0.32 GFF2997 COG1272: Predicted membrane protein hemolysin III homolog low > 78
Pantoea sp. MT58 0.18 IAI47_15610 ferrichrome porin FhuA 0.35 IAI47_03795 hemolysin III family protein low > 76
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS12840 TonB-dependent siderophore receptor 0.83 ABZR87_RS02015 hemolysin III family protein low > 80
Rahnella sp. WP5 0.18 EX31_RS03225 ferrichrome porin FhuA 0.34 EX31_RS21610 hemolysin III family protein low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_03512 Ferrichrome outer membrane transporter/phage receptor 0.33 OHPLBJKB_00816 hypothetical protein low > 73
Shewanella amazonensis SB2B 0.17 Sama_2875 outer membrane protein (RefSeq) 0.29 Sama_1862 hemolysin III family channel protein (RefSeq) low > 62
Pseudomonas fluorescens GW456-L13 0.17 PfGW456L13_1133 Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent 0.58 PfGW456L13_1038 COG1272: Predicted membrane protein hemolysin III homolog low > 87
Shewanella sp. ANA-3 0.17 Shewana3_0983 TonB-dependent siderophore receptor (RefSeq) 0.27 Shewana3_1934 hemolysin III family channel protein (RefSeq) low > 73
Enterobacter asburiae PDN3 0.17 EX28DRAFT_3739 TonB-dependent siderophore receptor 0.33 EX28DRAFT_2950 channel protein, hemolysin III family low > 76
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.5299.1 Ferrichrome-iron receptor 0.47 Xcc-8004.1589.1 COG1272: Predicted membrane protein hemolysin III homolog low > 74
Escherichia coli ECOR38 0.17 HEPCGN_08270 fhuA ferrichrome porin FhuA 0.33 HEPCGN_18835 yqfA hemolysin III family protein low > 87
Shewanella oneidensis MR-1 0.17 SO1156 TonB-dependent receptor (NCBI ptt file) 0.27 SO2447 channel protein, hemolysin III family subfamily (NCBI ptt file) low > 76
Escherichia coli BL21 0.17 ECD_00149 ferrichrome outer membrane transporter 0.33 ECD_02731 hemolysin III family HylIII inner membrane protein low > 61
Escherichia coli Nissle 1917 0.16 ECOLIN_RS00840 ferrichrome porin FhuA 0.33 ECOLIN_RS16150 hemolysin III family protein low > 55
Escherichia fergusonii Becca 0.16 EFB2_03894 Ferrichrome outer membrane transporter/phage receptor 0.33 EFB2_01002 hypothetical protein low > 86
Escherichia coli ECRC101 0.16 MCAODC_00835 fhuA ferrichrome porin FhuA 0.33 MCAODC_10065 yqfA hemolysin III family protein low > 87
Escherichia coli ECRC99 0.16 KEDOAH_17835 fhuA ferrichrome porin FhuA 0.33 KEDOAH_08595 yqfA hemolysin III family protein — —
Escherichia coli ECRC102 0.16 NIAGMN_08170 fhuA ferrichrome porin FhuA 0.33 NIAGMN_17310 yqfA hemolysin III family protein — —
Escherichia coli ECRC100 0.16 OKFHMN_10320 fhuA ferrichrome porin FhuA 0.33 OKFHMN_19545 yqfA hemolysin III family protein low > 80
Escherichia coli ECRC98 0.16 JDDGAC_13915 fhuA ferrichrome porin FhuA 0.33 JDDGAC_23185 yqfA hemolysin III family protein low > 86
Escherichia coli ECRC62 0.16 BNILDI_09005 fhuA ferrichrome porin FhuA 0.33 BNILDI_10000 yqfA hemolysin III family protein low > 75
Escherichia coli ECOR27 0.16 NOLOHH_02665 fhuA ferrichrome porin FhuA 0.33 NOLOHH_11465 yqfA hemolysin III family protein low > 75
Escherichia coli BW25113 0.16 b0150 fhuA ferrichrome outer membrane transporter (NCBI) 0.33 b2899 yqfA predicted oxidoreductase, inner membrane subunit (NCBI) low > 76
Acinetobacter radioresistens SK82 0.15 MPMX26_01925 Metal-pseudopaline receptor CntO 0.31 MPMX26_00606 hypothetical protein — —
Alteromonas macleodii MIT1002 0.14 MIT1002_01786 Ferric hydroxamate uptake 0.34 MIT1002_00886 hemolysin low > 70
Caulobacter crescentus NA1000 Δfur 0.14 CCNA_01585 TonB-dependent receptor 0.23 CCNA_03601 hemolysin III-related membrane protein low > 67
Caulobacter crescentus NA1000 0.14 CCNA_01585 TonB-dependent receptor 0.23 CCNA_03601 hemolysin III-related membrane protein low > 66
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS04635 TonB-dependent receptor 0.43 ABZR86_RS18160 hemolysin III family protein low > 74

Not shown: 17 genomes with orthologs for RR42_RS31760 only; 15 genomes with orthologs for RR42_RS36990 only