| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS06555 | | 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) | 1.0 | RR42_RS26905 | | methylcrotonoyl-CoA carboxylase | 0.68 | 2 |
| Ralstonia solanacearum GMI1000 | 0.90 | RS_RS07905 | | CoA transferase subunit A | 0.90 | RS_RS01320 | | methylcrotonoyl-CoA carboxylase | 0.27 | 50 |
| Paraburkholderia sabiae LMG 24235 | 0.86 | QEN71_RS05245 | | CoA transferase subunit A | 0.87 | QEN71_RS12865 | | carboxyl transferase domain-containing protein | 0.73 | 9 |
| Ralstonia solanacearum IBSBF1503 | 0.86 | RALBFv3_RS01830 | | CoA transferase subunit A | 0.91 | RALBFv3_RS10480 | | methylcrotonoyl-CoA carboxylase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.86 | UW163_RS15140 | | CoA transferase subunit A | 0.91 | UW163_RS03100 | | methylcrotonoyl-CoA carboxylase | — | — |
| Ralstonia solanacearum PSI07 | 0.85 | RPSI07_RS15660 | | CoA transferase subunit A | 0.90 | RPSI07_RS22835 | | methylcrotonoyl-CoA carboxylase | low | > 81 |
| Burkholderia phytofirmans PsJN | 0.84 | BPHYT_RS13675 | | succinyl-CoA:3-ketoacid-CoA transferase | 0.86 | BPHYT_RS23265 | | methylcrotonoyl-CoA carboxylase | low | > 109 |
| Castellaniella sp019104865 MT123 | 0.82 | ABCV34_RS00770 | | CoA transferase subunit A | 0.77 | ABCV34_RS12355 | | carboxyl transferase domain-containing protein | 0.94 | 2 |
| Lysobacter sp. OAE881 | 0.81 | ABIE51_RS04380 | | CoA transferase subunit A | 0.74 | ABIE51_RS13160 | | carboxyl transferase domain-containing protein | low | > 62 |
| Acinetobacter radioresistens SK82 | 0.81 | MPMX26_00627 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | 0.77 | MPMX26_00631 | | Propionyl-CoA carboxylase beta chain | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.81 | H281DRAFT_04495 | | 3-oxoacid CoA-transferase subunit A | 0.86 | H281DRAFT_01345 | | 3-methylcrotonyl-CoA carboxylase beta subunit | 0.38 | 38 |
| Herbaspirillum seropedicae SmR1 | 0.80 | HSERO_RS23190 | | succinyl-CoA:3-ketoacid-CoA transferase | 0.83 | HSERO_RS23455 | | methylcrotonoyl-CoA carboxylase | — | — |
| Paraburkholderia graminis OAS925 | 0.80 | ABIE53_002909 | | 3-oxoacid CoA-transferase subunit A | 0.86 | ABIE53_005466 | | 3-methylcrotonyl-CoA carboxylase beta subunit | 0.48 | 40 |
| Ralstonia sp. UNC404CL21Col | 0.80 | ABZR87_RS13770 | | CoA transferase subunit A | 0.91 | ABZR87_RS06280 | | carboxyl transferase domain-containing protein | 0.61 | 31 |
| Acidovorax sp. GW101-3H11 | 0.79 | Ac3H11_132 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | 0.81 | Ac3H11_3010 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.79 | Xcc-8004.4478.1 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | 0.76 | Xcc-8004.319.1 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | 0.78 | 4 |
| Variovorax sp. OAS795 | 0.78 | ABID97_RS19440 | | CoA transferase subunit A | 0.79 | ABID97_RS25130 | | carboxyl transferase domain-containing protein | low | > 91 |
| Pseudomonas stutzeri RCH2 | 0.78 | Psest_1078 | | acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) | 0.71 | Psest_1083 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | 0.58 | 4 |
| Variovorax sp. SCN45 | 0.76 | GFF7371 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | 0.80 | GFF2008 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | low | > 127 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.76 | GFF5197 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | 0.81 | GFF1715 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | 0.60 | 24 |
| Rhodopseudomonas palustris CGA009 | 0.73 | TX73_021545 | | CoA transferase subunit A | 0.73 | TX73_013115 | | carboxyl transferase domain-containing protein | 0.38 | 4 |
| Bosea sp. OAE506 | 0.72 | ABIE41_RS01850 | | CoA transferase subunit A | 0.72 | ABIE41_RS14815 | | carboxyl transferase domain-containing protein | low | > 77 |
| Caulobacter crescentus NA1000 | 0.70 | CCNA_00206 | | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A | 0.72 | CCNA_02252 | | methylcrotonyl-CoA carboxylase carboxyl transferase subunit | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.70 | CCNA_00206 | | succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A | 0.72 | CCNA_02252 | | methylcrotonyl-CoA carboxylase carboxyl transferase subunit | low | > 67 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.70 | A4249_RS02960 | | CoA transferase subunit A | 0.71 | A4249_RS03795 | | carboxyl transferase domain-containing protein | low | > 48 |
| Dinoroseobacter shibae DFL-12 | 0.68 | Dshi_1136 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | 0.67 | Dshi_1300 | | Propionyl-CoA carboxylase (RefSeq) | low | > 64 |
| Phaeobacter inhibens DSM 17395 | 0.67 | PGA1_c06210 | | probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A | 0.70 | PGA1_c10320 | | methylcrotonoyl-CoA carboxylase beta chain | — | — |
| Shewanella loihica PV-4 | 0.66 | Shew_2575 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | 0.76 | Shew_2571 | | propionyl-CoA carboxylase (RefSeq) | — | — |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.65 | CA264_04625 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.48 | CA264_20625 | | methylcrotonoyl-CoA carboxylase | low | > 74 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.64 | CA265_RS06305 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.48 | CA265_RS10640 | | methylcrotonoyl-CoA carboxylase | low | > 88 |
| Shewanella oneidensis MR-1 | 0.64 | SO1892 | atoD | acetate CoA-transferase, subunit A (NCBI ptt file) | 0.76 | SO1896 | pccB-1 | 3-methylcrotonyl CoA carboxylase, beta subunit (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.64 | Sama_0518 | | 3-oxoacid CoA-transferase (RefSeq) | 0.76 | Sama_1361 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | low | > 62 |
| Shewanella sp. ANA-3 | 0.63 | Shewana3_1667 | | 3-oxoacid CoA-transferase, A subunit (RefSeq) | 0.76 | Shewana3_1671 | | carboxyl transferase (RefSeq) | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.63 | Echvi_3272 | | 3-oxoacid CoA-transferase, A subunit | 0.43 | Echvi_0113 | | Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | low | > 79 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.63 | ABZR88_RS15870 | | CoA transferase subunit A | 0.48 | ABZR88_RS10315 | | acyl-CoA carboxylase subunit beta | low | > 71 |
| Kangiella aquimarina DSM 16071 | 0.63 | B158DRAFT_2505 | | 3-oxoacid CoA-transferase, A subunit | 0.77 | B158DRAFT_2509 | | Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.62 | Ga0059261_0265 | | 3-oxoacid CoA-transferase, A subunit | 0.72 | Ga0059261_4055 | | Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) | low | > 68 |
| Alteromonas macleodii MIT1002 | 0.62 | MIT1002_02001 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | 0.76 | MIT1002_01668 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 70 |
| Mycobacterium tuberculosis H37Rv | 0.61 | Rv2504c | | Probable succinyl-CoA:3-ketoacid-coenzyme A transferase (alpha subunit) ScoA (3-oxo acid:CoA transferase) (OXCT A) (succinyl-CoA:3-oxoacid-coenzyme A transferase) | 0.68 | Rv2502c | | Probable acetyl-/propionyl-CoA carboxylase (beta subunit) AccD1 | low | > 58 |
| Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_5833 | | Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) | 0.71 | Pf1N1B4_3986 | | Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) | 0.29 | 50 |
| Pseudomonas putida KT2440 | 0.60 | PP_3122 | | acetoacetyl CoA-transferase (subunit A) | 0.72 | PP_4065 | | methylcrotonyl-CoA carboxylase biotin-containing subunit beta | 0.39 | 4 |
| Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_21650 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.72 | AO356_01585 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | 0.32 | 35 |
| Pseudomonas fluorescens FW300-N2E3 | 0.60 | AO353_27935 | | succinyl-CoA--3-ketoacid-CoA transferase | 0.71 | AO353_20345 | | methylcrotonoyl-CoA carboxylase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.60 | Pf6N2E2_2111 | | Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) | 0.72 | Pf6N2E2_2192 | | 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) | 0.32 | 1 |
| Pseudomonas sp. RS175 | 0.60 | PFR28_01325 | | putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A | 0.71 | PFR28_01259 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | 0.48 | 23 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS10585 | | CoA transferase subunit A | 0.72 | PFLU_RS18970 | | methylcrotonoyl-CoA carboxylase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS10585 | | CoA transferase subunit A | 0.72 | PFLU_RS18970 | | methylcrotonoyl-CoA carboxylase | 0.27 | 14 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_10525 | | succinyl-CoA:3-ketoacid-CoA transferase | 0.72 | PS417_17020 | | methylcrotonoyl-CoA carboxylase | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.59 | Psyr_3237 | | 3-oxoacid CoA-transferase | 0.71 | Psyr_2469 | | Propionyl-CoA carboxylase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.59 | Psyr_3237 | | 3-oxoacid CoA-transferase | 0.71 | Psyr_2469 | | Propionyl-CoA carboxylase | low | > 86 |
| Fusobacterium nucleatum SB010 | 0.40 | HUW76_01850 | | CoA transferase subunit A | 0.15 | HUW76_02535 | | glutaconyl-CoA decarboxylase subunit alpha | — | — |
| Azospirillum sp. SherDot2 | 0.38 | MPMX19_03462 | | Acetate CoA-transferase subunit alpha | 0.78 | MPMX19_03938 | | Methylmalonyl-CoA carboxyltransferase 12S subunit | low | > 112 |
| Rhodospirillum rubrum S1H | 0.34 | Rru_A1383 | | Acetate CoA-transferase (NCBI) | 0.72 | Rru_A1943 | | Propionyl-CoA carboxylase (NCBI) | — | — |
Not shown: 10 genomes with orthologs for RR42_RS06555 only; 20 genomes with orthologs for RR42_RS26905 only