Conservation of cofitness between RR42_RS19480 and RR42_RS17990 in Cupriavidus basilensis FW507-4G11

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS19480 secretion system protein G 1.0 RR42_RS17990 methyltransferase 0.88 6
Ralstonia sp. UNC404CL21Col 0.84 ABZR87_RS03410 type II secretion system major pseudopilin GspG 0.62 ABZR87_RS01855 A24 family peptidase 0.65 13
Ralstonia solanacearum PSI07 0.84 RPSI07_RS09560 type II secretion system protein GspG 0.60 RPSI07_RS11050 prepilin peptidase low > 81
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS07700 type II secretion system protein GspG 0.64 RALBFv3_RS06190 prepilin peptidase low > 76
Ralstonia solanacearum UW163 0.81 UW163_RS05925 type II secretion system protein GspG 0.64 UW163_RS07435 prepilin peptidase — —
Ralstonia solanacearum GMI1000 0.81 RS_RS15600 type II secretion system protein GspG 0.59 RS_RS14140 prepilin peptidase 0.48 16
Paraburkholderia graminis OAS925 0.75 ABIE53_000300 general secretion pathway protein G 0.44 ABIE53_003596 leader peptidase (prepilin peptidase)/N-methyltransferase 0.87 1
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_02352 general secretion pathway protein G 0.46 H281DRAFT_06255 leader peptidase (prepilin peptidase) / N-methyltransferase 0.57 2
Paraburkholderia sabiae LMG 24235 0.75 QEN71_RS29530 type II secretion system protein GspG 0.47 QEN71_RS27315 A24 family peptidase 0.31 145
Burkholderia phytofirmans PsJN 0.74 BPHYT_RS19615 general secretion pathway protein G 0.45 BPHYT_RS17155 peptidase A24 — —
Acidovorax sp. GW101-3H11 0.67 Ac3H11_2038 General secretion pathway protein G 0.45 Ac3H11_4764 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF1382 General secretion pathway protein G 0.47 GFF1281 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 90
Variovorax sp. SCN45 0.65 GFF5244 General secretion pathway protein G 0.37 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 127
Variovorax sp. OAS795 0.64 ABID97_RS06990 type II secretion system major pseudopilin GspG 0.35 ABID97_RS23440 A24 family peptidase 0.41 35
Pseudomonas stutzeri RCH2 0.61 Psest_4200 general secretion pathway protein G 0.45 Psest_3286 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases low > 67
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS11870 type II secretion system protein GspG 0.48 PFLU_RS03940 prepilin peptidase low > 109
Pseudomonas fluorescens SBW25 0.59 PFLU_RS11870 type II secretion system protein GspG 0.48 PFLU_RS03940 prepilin peptidase low > 109
Pseudomonas sp. S08-1 0.59 OH686_11775 type II secretion system protein G 0.47 OH686_16495 Leader peptidase (Prepilin peptidase) / N-methyltransferase — —
Pseudomonas simiae WCS417 0.58 PS417_11275 general secretion pathway protein GspG 0.47 PS417_03895 methyltransferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_647 General secretion pathway protein G 0.45 Pf6N2E2_5140 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_24770 type II secretion system protein GspG 0.45 AO356_16005 methyltransferase low > 104
Marinobacter adhaerens HP15 0.56 HP15_1604 general secretion pathway protein G 0.48 HP15_2411 type IV pilus prepilin peptidase PilD 0.73 8
Pseudomonas sp. RS175 0.56 PFR28_01746 Type II secretion system protein G 0.43 PFR28_03733 Type 4 prepilin-like proteins leader peptide-processing enzyme low > 88
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_13775 type II secretion system protein GspG 0.48 CSW01_12285 prepilin peptidase — —
Pseudomonas putida KT2440 0.54 PP_1049 putative protein secretion protein for export 0.49 PP_0632 leader peptidase/N-methyltransferase low > 96
Erwinia tracheiphila SCR3 0.52 LU632_RS25245 gspG type II secretion system major pseudopilin GspG 0.31 LU632_RS25275 A24 family peptidase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.945.1 General secretion pathway protein G 0.38 Xcc-8004.1345.1 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) — —
Escherichia coli BL21 0.52 ECD_02835 putative type II secretion protein GspG 0.27 ECD_02841 bifunctional prepilin leader peptidase/ methylase 0.89 15
Escherichia coli ECOR38 0.52 HEPCGN_18065 gspG general secretion pathway protein G 0.27 HEPCGN_18035 pppA prepilin peptidase PppA 0.88 9
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_00742 Type II secretion system protein G 0.26 OHPLBJKB_00736 Leader peptidase PppA low > 73
Escherichia coli Nissle 1917 0.52 ECOLIN_RS17070 type II secretion system major pseudopilin GspG 0.27 ECOLIN_RS17100 prepilin peptidase PppA low > 55
Escherichia coli ECOR27 0.52 NOLOHH_10990 gspG general secretion pathway protein G 0.26 NOLOHH_10960 pppA prepilin peptidase PppA low > 75
Escherichia fergusonii Becca 0.52 EFB2_00848 Type II secretion system protein G 0.26 EFB2_00842 Prepilin peptidase PppA low > 86
Pectobacterium carotovorum WPP14 0.51 HER17_RS06700 type II secretion system major pseudopilin GspG 0.39 HER17_RS06740 A24 family peptidase low > 75
Dickeya dianthicola 67-19 0.51 HGI48_RS14720 type II secretion system major pseudopilin GspG 0.38 HGI48_RS14685 prepilin peptidase low > 71
Dickeya dianthicola ME23 0.51 DZA65_RS15665 type II secretion system major pseudopilin GspG 0.38 DZA65_RS15630 prepilin peptidase low > 75
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_12560 type II secretion system protein GspG 0.43 AO353_14320 methyltransferase low > 101
Shewanella loihica PV-4 0.51 Shew_3616 general secretion pathway protein G (RefSeq) 0.40 Shew_3440 prepilin peptidase (RefSeq) — —
Dickeya dadantii 3937 0.51 DDA3937_RS14785 type II secretion system major pseudopilin GspG 0.38 DDA3937_RS14750 prepilin peptidase low > 74
Escherichia coli ECRC102 0.49 NIAGMN_28590 gspG type II secretion system major pseudopilin GspG 0.34 NIAGMN_28555 pulO prepilin peptidase — —
Escherichia coli ECRC101 0.49 MCAODC_15280 gspG type II secretion system major pseudopilin GspG 0.34 MCAODC_15315 pulO prepilin peptidase low > 87
Escherichia coli ECRC98 0.49 JDDGAC_30310 gspG type II secretion system major pseudopilin GspG 0.34 JDDGAC_30345 pulO prepilin peptidase low > 86
Escherichia coli ECRC100 0.49 OKFHMN_00270 gspG type II secretion system major pseudopilin GspG 0.34 OKFHMN_00235 pulO prepilin peptidase low > 80
Klebsiella michiganensis M5al 0.49 BWI76_RS05075 type II secretion system protein GspG 0.39 BWI76_RS05035 prepilin peptidase — —
Pseudomonas fluorescens GW456-L13 0.49 PfGW456L13_263 General secretion pathway protein G 0.48 PfGW456L13_1508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) low > 87
Alteromonas macleodii MIT1002 0.48 MIT1002_03979 Pullulanase secretion protein PulG 0.43 MIT1002_03011 Pectic enzymes secretion protein OutO — —
Shewanella amazonensis SB2B 0.48 Sama_0172 general secretion pathway protein G (RefSeq) 0.43 Sama_0367 prepilin peptidase (RefSeq) — —
Rahnella sp. WP5 0.48 EX31_RS16180 type II secretion system major pseudopilin GspG 0.36 EX31_RS16215 prepilin peptidase low > 89
Shewanella sp. ANA-3 0.47 Shewana3_0154 general secretion pathway protein G (RefSeq) 0.43 Shewana3_0417 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A (RefSeq) 0.73 11
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2076 type II secretion system protein G 0.30 EX28DRAFT_2069 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases low > 76
Shewanella oneidensis MR-1 0.47 SO0169 gspG general secretion pathway protein G (NCBI ptt file) 0.43 SO0414 pilD type 4 prepilin-like proteins leader peptide processing enzyme (NCBI ptt file) 0.81 10
Enterobacter sp. TBS_079 0.47 MPMX20_01518 Type II secretion system protein G 0.30 MPMX20_01525 Type 4 prepilin-like proteins leader peptide-processing enzyme low > 85
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_0692 general secretion pathway protein G 0.43 B158DRAFT_2140 type 4 prepilin peptidase 1 (EC:3.4.23.43). Aspartic peptidase. MEROPS family A24A — —
Acinetobacter radioresistens SK82 0.39 MPMX26_00284 Type II secretion system protein G 0.40 MPMX26_00244 Type 4 prepilin-like proteins leader peptide-processing enzyme low > 36
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_3949 type II secretion system protein G 0.17 Ga0059261_1485 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases low > 68
Escherichia coli BW25113 0.37 b3328 gspG pseudopilin, cryptic, general secretion pathway (NCBI) 0.26 b2972 b2972 putative peptidase (VIMSS) low > 76
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS00940 general secretion pathway protein 0.40 HSERO_RS01760 methyltransferase low > 78
Rhodanobacter denitrificans MT42 0.32 LRK55_RS09610 type II secretion system major pseudopilin GspG 0.36 LRK55_RS03730 A24 family peptidase low > 63
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS09970 type II secretion system major pseudopilin GspG 0.36 LRK54_RS03960 A24 family peptidase low > 59
Rhodanobacter sp. FW510-T8 0.32 OKGIIK_16225 gspG type II secretion system major pseudopilin GspG 0.37 OKGIIK_10830 pulO prepilin peptidase low > 52
Lysobacter sp. OAE881 0.32 ABIE51_RS13610 type II secretion system major pseudopilin GspG 0.42 ABIE51_RS04805 A24 family peptidase low > 62
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_3149 General secretion pathway protein G 0.47 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_3149 General secretion pathway protein G 0.47 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A low > 86
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS13105 type II secretion system major pseudopilin GspG 0.40 ABZR86_RS10050 A24 family peptidase 0.74 9

Not shown: 2 genomes with orthologs for RR42_RS19480 only; 7 genomes with orthologs for RR42_RS17990 only