Conservation of cofitness between QEN71_RS28660 and QEN71_RS05480 in Paraburkholderia sabiae LMG 24235

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS28660 5-oxoprolinase subunit PxpA 1.0 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.68 18
Paraburkholderia graminis OAS925 0.93 ABIE53_000049 UPF0271 protein 0.95 ABIE53_002857 phosphomethylpyrimidine synthase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.93 H281DRAFT_05811 UPF0271 protein 0.95 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Burkholderia phytofirmans PsJN 0.92 BPHYT_RS18635 LamB/YcsF family protein 0.95 BPHYT_RS13220 phosphomethylpyrimidine synthase low > 109
Ralstonia solanacearum PSI07 0.69 RPSI07_RS13790 LamB/YcsF family protein 0.70 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC low > 81
Variovorax sp. OAS795 0.69 ABID97_RS23840 5-oxoprolinase subunit PxpA 0.65 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC low > 91
Ralstonia solanacearum UW163 0.68 UW163_RS10245 LamB/YcsF family protein 0.69 UW163_RS03640 phosphomethylpyrimidine synthase ThiC — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS03425 LamB/YcsF family protein 0.69 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC — —
Ralstonia solanacearum GMI1000 0.68 RS_RS10885 LamB/YcsF family protein 0.69 RS_RS00555 phosphomethylpyrimidine synthase low > 80
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS15325 5-oxoprolinase subunit PxpA 0.69 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC low > 80
Variovorax sp. SCN45 0.66 GFF2324 Lactam utilization protein LamB 0.66 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) low > 127
Cupriavidus basilensis FW507-4G11 0.63 RR42_RS00650 hypothetical protein 0.69 RR42_RS01290 thiamine biosynthesis protein ThiC low > 128
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS08780 LamB/YcsF family protein 0.86 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC98 0.61 JDDGAC_10650 pxpA 5-oxoprolinase subunit PxpA 0.68 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC low > 86
Escherichia coli ECRC101 0.61 MCAODC_26215 pxpA 5-oxoprolinase subunit PxpA 0.68 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC low > 87
Escherichia coli BL21 0.61 ECD_00673 UPF0271 family protein 0.68 ECD_03871 phosphomethylpyrimidine synthase low > 61
Escherichia coli ECOR27 0.61 NOLOHH_23380 pxpA 5-oxoprolinase subunit PxpA 0.68 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC low > 75
Escherichia coli ECRC62 0.61 BNILDI_21375 pxpA 5-oxoprolinase subunit PxpA 0.68 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_03004 hypothetical protein 0.68 OHPLBJKB_04056 Phosphomethylpyrimidine synthase low > 73
Escherichia coli ECRC100 0.61 OKFHMN_06995 pxpA 5-oxoprolinase subunit PxpA 0.68 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC low > 80
Escherichia coli ECRC102 0.61 NIAGMN_05050 pxpA 5-oxoprolinase subunit PxpA 0.68 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC99 0.61 KEDOAH_20970 pxpA 5-oxoprolinase subunit PxpA 0.68 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli Nissle 1917 0.61 ECOLIN_RS03815 5-oxoprolinase subunit PxpA 0.68 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC low > 55
Escherichia coli BW25113 0.61 b0713 ybgL hypothetical protein (NCBI) 0.68 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) low > 76
Escherichia fergusonii Becca 0.61 EFB2_03390 5-oxoprolinase subunit A 0.68 EFB2_04617 Phosphomethylpyrimidine synthase low > 86
Escherichia coli ECOR38 0.61 HEPCGN_01215 pxpA 5-oxoprolinase subunit PxpA 0.67 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF4618 Lactam utilization protein LamB 0.67 GFF4198 Thiamin biosynthesis protein ThiC low > 78
Klebsiella michiganensis M5al 0.59 BWI76_RS08360 LamB/YcsF family protein 0.67 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC low > 92
Rahnella sp. WP5 0.59 EX31_RS23395 5-oxoprolinase subunit PxpA 0.67 EX31_RS16815 phosphomethylpyrimidine synthase ThiC low > 89
Pantoea sp. MT58 0.58 IAI47_13795 5-oxoprolinase subunit PxpA 0.67 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Serratia liquefaciens MT49 0.58 IAI46_06225 5-oxoprolinase subunit PxpA 0.67 IAI46_01320 phosphomethylpyrimidine synthase ThiC low > 86
Enterobacter asburiae PDN3 0.57 EX28DRAFT_2274 Uncharacterized proteins, homologs of lactam utilization protein B 0.67 EX28DRAFT_4536 phosphomethylpyrimidine synthase low > 76
Pectobacterium carotovorum WPP14 0.57 HER17_RS14975 5-oxoprolinase subunit PxpA 0.68 HER17_RS20380 phosphomethylpyrimidine synthase ThiC low > 75
Dickeya dadantii 3937 0.56 DDA3937_RS06425 5-oxoprolinase subunit PxpA 0.67 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC low > 74
Dickeya dianthicola ME23 0.55 DZA65_RS06815 5-oxoprolinase subunit PxpA 0.66 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS06470 5-oxoprolinase subunit PxpA 0.66 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC low > 71
Enterobacter sp. TBS_079 0.54 MPMX20_01347 5-oxoprolinase subunit A 0.68 MPMX20_00217 Phosphomethylpyrimidine synthase low > 85
Pedobacter sp. GW460-11-11-14-LB5 0.49 CA265_RS10100 lactam utilization protein LamB 0.70 CA265_RS20165 phosphomethylpyrimidine synthase ThiC low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.49 ABZR88_RS12605 5-oxoprolinase subunit PxpA 0.71 ABZR88_RS08840 phosphomethylpyrimidine synthase ThiC low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.49 CA264_08790 LamB/YcsF family protein 0.72 CA264_20435 phosphomethylpyrimidine synthase ThiC low > 74
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_04730 5-oxoprolinase subunit A 0.75 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC low > 52
Shewanella loihica PV-4 0.46 Shew_0006 LamB/YcsF family protein (RefSeq) 0.68 Shew_2096 thiamine biosynthesis protein ThiC (RefSeq) low > 60
Agrobacterium fabrum C58 0.45 Atu3910 LamB/YcsF family protein 0.62 Atu2569 thiamine biosynthesis protein low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0497 LamB/YcsF 0.74 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Magnetospirillum magneticum AMB-1 0.45 AMB_RS15095 LamB/YcsF family protein 0.64 AMB_RS01125 phosphomethylpyrimidine synthase — —
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0497 LamB/YcsF 0.74 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Azospirillum brasilense Sp245 0.44 AZOBR_RS14715 hypothetical protein 0.64 AZOBR_RS07940 phosphomethylpyrimidine synthase low > 97
Rhodopseudomonas palustris CGA009 0.43 TX73_013895 LamB/YcsF family protein 0.61 TX73_018540 phosphomethylpyrimidine synthase ThiC low > 86
Castellaniella sp019104865 MT123 0.41 ABCV34_RS01510 5-oxoprolinase subunit PxpA 0.79 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC low > 48
Rhodospirillum rubrum S1H 0.41 Rru_A1504 LamB/YcsF (NCBI) 0.57 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) low > 58
Shewanella amazonensis SB2B 0.40 Sama_0021 hypothetical protein (RefSeq) 0.68 Sama_1860 thiamine biosynthesis protein ThiC (RefSeq) low > 62
Azospirillum sp. SherDot2 0.40 MPMX19_04959 5-oxoprolinase subunit A 0.60 MPMX19_00336 Phosphomethylpyrimidine synthase low > 112
Lysobacter sp. OAE881 0.40 ABIE51_RS08130 5-oxoprolinase subunit PxpA 0.72 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC low > 62
Phaeobacter inhibens DSM 17395 0.39 PGA1_c28700 LamB/YcsF family protein 0.63 PGA1_c09110 thiamine biosynthesis protein ThiC low > 62
Bosea sp. OAE506 0.38 ABIE41_RS24170 5-oxoprolinase subunit PxpA 0.61 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC low > 77
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_3010 Uncharacterized proteins, homologs of lactam utilization protein B 0.71 Echvi_3567 thiamine biosynthesis protein ThiC low > 79
Pseudomonas simiae WCS417 0.37 PS417_21910 LamB/YcsF family protein 0.73 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_18055 hypothetical protein 0.66 CSW01_00335 phosphomethylpyrimidine synthase low > 62
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS09840 5-oxoprolinase subunit PxpA 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas fluorescens SBW25 0.36 PFLU_RS09840 5-oxoprolinase subunit PxpA 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC low > 109
Pseudomonas sp. S08-1 0.36 OH686_08750 Lactam utilization protein LamB 0.74 OH686_15885 phosphomethylpyrimidine synthase low > 80
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_04335 hypothetical protein 0.74 AO356_08810 thiamine biosynthesis protein ThiC low > 104
Pseudomonas putida KT2440 0.35 PP_2920 putative nitrogen-containing compound degradation enzyme 0.76 PP_4922 Phosphomethylpyrimidine synthase low > 96
Pseudomonas sp. RS175 0.35 PFR28_00728 5-oxoprolinase subunit A 3 0.74 PFR28_05091 Phosphomethylpyrimidine synthase low > 88
Dinoroseobacter shibae DFL-12 0.35 Dshi_2026 LamB/YcsF family protein (RefSeq) 0.63 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) — —
Pseudomonas stutzeri RCH2 0.35 Psest_1542 Uncharacterized proteins, homologs of lactam utilization protein B 0.74 Psest_0477 thiamine biosynthesis protein ThiC low > 67
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_4478 Lactam utilization protein LamB 0.74 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3366 Lactam utilization protein LamB 0.74 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 87
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_28820 lactam utilization protein LamB 0.74 AO353_13010 thiamine biosynthesis protein ThiC low > 101
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_2708 Lactam utilization protein LamB 0.74 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 103

Not shown: 1 genomes with orthologs for QEN71_RS28660 only; 24 genomes with orthologs for QEN71_RS05480 only