Conservation of cofitness between QEN71_RS23260 and QEN71_RS02525 in Paraburkholderia sabiae LMG 24235

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Paraburkholderia sabiae LMG 24235 1.0 QEN71_RS23260 fluoride efflux transporter CrcB 1.0 QEN71_RS02525 efflux RND transporter permease subunit 0.58 18
Paraburkholderia graminis OAS925 0.86 ABIE53_001795 CrcB protein 0.92 ABIE53_003408 multidrug efflux pump low > 113
Paraburkholderia bryophila 376MFSha3.1 0.85 H281DRAFT_05070 camphor resistance protein CrcB 0.93 H281DRAFT_04170 multidrug efflux pump low > 103
Burkholderia phytofirmans PsJN 0.82 BPHYT_RS07905 camphor resistance protein CrcB 0.93 BPHYT_RS16170 multidrug efflux RND transporter permease subunit — —
Erwinia tracheiphila SCR3 0.55 LU632_RS01320 crcB fluoride efflux transporter CrcB 0.64 LU632_RS18185 efflux RND transporter permease subunit — —
Castellaniella sp019104865 MT123 0.53 ABCV34_RS01160 fluoride efflux transporter CrcB 0.49 ABCV34_RS04225 efflux RND transporter permease subunit low > 48
Pantoea sp. MT58 0.49 IAI47_01170 fluoride efflux transporter CrcB 0.64 IAI47_14515 multidrug efflux RND transporter permease subunit 0.33 34
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS21375 fluoride efflux transporter CrcB 0.60 ABZR86_RS18285 efflux RND transporter permease subunit low > 74
Pectobacterium carotovorum WPP14 0.48 HER17_RS15285 fluoride efflux transporter CrcB 0.65 HER17_RS15740 multidrug efflux RND transporter permease subunit low > 75
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS14415 fluoride efflux transporter CrcB 0.46 LRK54_RS02100 multidrug efflux RND transporter permease subunit low > 59
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_03260 crcB fluoride efflux transporter CrcB 0.47 OKGIIK_09170 Efflux pump membrane transporter low > 52
Enterobacter sp. TBS_079 0.47 MPMX20_01284 Putative fluoride ion transporter CrcB 0.65 MPMX20_01064 Multidrug efflux pump subunit AcrB low > 85
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS11475 fluoride efflux transporter CrcB 0.55 ABZR87_RS05315 efflux RND transporter permease subunit — —
Serratia liquefaciens MT49 0.46 IAI46_05885 fluoride efflux transporter CrcB 0.65 IAI46_05185 multidrug efflux RND transporter permease subunit SdeY low > 86
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2338 protein CrcB 0.65 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family low > 76
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS10540 camphor resistance protein CrcB 0.59 HSERO_RS06815 multidrug transporter low > 78
Variovorax sp. OAS795 0.45 ABID97_RS09460 fluoride efflux transporter CrcB 0.52 ABID97_RS00325 efflux RND transporter permease subunit — —
Dickeya dadantii 3937 0.45 DDA3937_RS06125 fluoride efflux transporter CrcB 0.66 DDA3937_RS05735 multidrug efflux RND transporter permease subunit low > 74
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS00020 fluoride efflux transporter CrcB 0.62 RALBFv3_RS19795 multidrug efflux RND transporter permease subunit — —
Escherichia coli ECRC62 0.44 BNILDI_21800 crcB fluoride efflux transporter CrcB 0.65 BNILDI_22555 acrB efflux RND transporter permease AcrB low > 75
Escherichia coli ECRC101 0.44 MCAODC_26630 crcB fluoride efflux transporter CrcB 0.65 MCAODC_27430 acrB efflux RND transporter permease AcrB low > 87
Ralstonia solanacearum UW163 0.44 UW163_RS13350 fluoride efflux transporter CrcB 0.62 UW163_RS19380 multidrug efflux RND transporter permease subunit — —
Escherichia coli ECRC102 0.44 NIAGMN_05470 crcB fluoride efflux transporter CrcB 0.65 NIAGMN_06260 acrB efflux RND transporter permease AcrB — —
Escherichia coli ECRC100 0.44 OKFHMN_07415 crcB fluoride efflux transporter CrcB 0.65 OKFHMN_08205 acrB efflux RND transporter permease AcrB low > 80
Escherichia coli ECOR27 0.44 NOLOHH_23790 crcB fluoride efflux transporter CrcB 0.65 NOLOHH_01140 acrB efflux RND transporter permease AcrB low > 75
Ralstonia solanacearum GMI1000 0.44 RS_RS06685 fluoride efflux transporter CrcB 0.62 RS_RS21030 multidrug efflux RND transporter permease subunit low > 80
Escherichia coli BL21 0.44 ECD_00594 fluoride efflux channel, dual topology membrane protein 0.65 ECD_00413 multidrug efflux system protein low > 61
Escherichia coli ECRC99 0.44 KEDOAH_20555 crcB fluoride efflux transporter CrcB 0.65 KEDOAH_19760 acrB efflux RND transporter permease AcrB — —
Escherichia coli ECRC98 0.44 JDDGAC_11060 crcB fluoride efflux transporter CrcB 0.60 JDDGAC_25915 acrD multidrug efflux RND transporter permease AcrD low > 86
Escherichia coli Nissle 1917 0.44 ECOLIN_RS03405 fluoride efflux transporter CrcB 0.66 ECOLIN_RS02750 efflux RND transporter permease AcrB — —
Escherichia fergusonii Becca 0.44 EFB2_03467 Putative fluoride ion transporter CrcB 0.65 EFB2_03596 Multidrug efflux pump subunit AcrB 0.42 25
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_03081 Putative fluoride ion transporter CrcB 0.65 OHPLBJKB_03212 Multidrug efflux pump subunit AcrB low > 73
Ralstonia solanacearum PSI07 0.44 RPSI07_RS17460 fluoride efflux transporter CrcB 0.62 RPSI07_RS03390 multidrug efflux RND transporter permease subunit — —
Rahnella sp. WP5 0.44 EX31_RS23045 fluoride efflux transporter CrcB 0.66 EX31_RS22470 multidrug efflux RND transporter permease subunit low > 89
Escherichia coli BW25113 0.44 b0624 crcB camphor resistance protein CrcB (NCBI) 0.65 b0462 acrB multidrug efflux system protein (NCBI) low > 76
Klebsiella michiganensis M5al 0.44 BWI76_RS07985 fluoride ion transporter CrcB 0.66 BWI76_RS06775 multidrug efflux RND transporter permease subunit low > 92
Dickeya dianthicola ME23 0.44 DZA65_RS06515 fluoride efflux transporter CrcB 0.65 DZA65_RS06115 multidrug efflux RND transporter permease subunit low > 75
Dickeya dianthicola 67-19 0.44 HGI48_RS06170 fluoride efflux transporter CrcB 0.65 HGI48_RS05790 multidrug efflux RND transporter permease subunit low > 71
Escherichia coli ECOR38 0.43 HEPCGN_00860 crcB fluoride efflux transporter CrcB 0.65 HEPCGN_06820 acrB efflux RND transporter permease AcrB low > 87
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS12515 camphor resistance protein CrcB 0.82 RR42_RS32420 multidrug efflux RND transporter permease subunit low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF5356 Protein crcB homolog 0.52 GFF3840 RND efflux system, inner membrane transporter CmeB low > 90
Acidovorax sp. GW101-3H11 0.42 Ac3H11_2593 Protein crcB homolog 0.52 Ac3H11_4448 RND efflux system, inner membrane transporter CmeB low > 79
Dechlorosoma suillum PS 0.40 Dsui_1367 crcB protein 0.47 Dsui_3182 hydrophobe/amphiphile efflux-1 (HAE1) family transporter — —
Variovorax sp. SCN45 0.40 GFF6174 Fluoride ion transporter CrcB 0.57 GFF5990 RND efflux system, inner membrane transporter low > 127
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF4537 CrcB protein 0.66 GFF4379 RND efflux system, inner membrane transporter CmeB low > 78
Sinorhizobium meliloti 1021 0.30 SMc01274 camphor resistance protein CrcB 0.50 SMc02867 multidrug-efflux system transmembrane protein low > 103
Shewanella oneidensis MR-1 0.30 SO2309 crcB crcB protein (NCBI ptt file) 0.62 SO4692 AcrB/AcrD/AcrF family protein (NCBI ptt file) — —
Shewanella loihica PV-4 0.30 Shew_2021 CrcB protein (RefSeq) 0.62 Shew_0032 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) — —
Shewanella sp. ANA-3 0.30 Shewana3_2053 camphor resistance protein CrcB (RefSeq) 0.62 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) — —
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_2654 CrcB protein 0.62 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB low > 87
Pseudomonas sp. RS175 0.27 PFR28_02605 Putative fluoride ion transporter CrcB 0.62 PFR28_00631 putative efflux pump membrane transporter TtgB low > 88
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_22190 camphor resistance protein CrcB 0.63 AO356_04880 multidrug transporter low > 104
Rhodospirillum rubrum S1H 0.27 Rru_A0236 Camphor resistance CrcB protein (NCBI) 0.61 Rru_A2051 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) low > 58
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_27635 camphor resistance protein CrcB 0.62 AO353_17295 multidrug transporter low > 101
Shewanella amazonensis SB2B 0.26 Sama_1775 crcB protein (RefSeq) 0.61 Sama_3554 AcrB/AcrD/AcrF family protein (RefSeq) low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_3176 camphor resistance protein CrcB 0.62 Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 — —
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_3176 camphor resistance protein CrcB 0.62 Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 low > 86
Pseudomonas fluorescens SBW25 0.25 PFLU_RS18515 fluoride efflux transporter CrcB 0.61 PFLU_RS06805 efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS18515 fluoride efflux transporter CrcB 0.61 PFLU_RS06805 efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_4063 CrcB protein 0.62 Pf1N1B4_3246 RND efflux system, inner membrane transporter CmeB low > 87
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_300 CrcB protein 0.63 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB low > 103
Pseudomonas simiae WCS417 0.25 PS417_16475 camphor resistance protein CrcB 0.62 PS417_06770 multidrug transporter low > 88
Pseudomonas sp. S08-1 0.23 OH686_00275 Fluoride ion transporter CrcB 0.64 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) low > 80
Pseudomonas putida KT2440 0.23 PP_4001 Putative fluoride ion transporter CrcB 0.61 PP_1385 Probable efflux pump membrane transporter TtgB low > 96
Azospirillum sp. SherDot2 0.23 MPMX19_01719 Putative fluoride ion transporter CrcB 0.64 MPMX19_05884 Multidrug efflux pump subunit AcrB low > 112
Dinoroseobacter shibae DFL-12 0.22 Dshi_0314 Camphor resistance CrcB protein (RefSeq) 0.12 Dshi_0917 acriflavin resistance protein (RefSeq) — —
Acinetobacter radioresistens SK82 0.22 MPMX26_00303 Putative fluoride ion transporter CrcB 0.55 MPMX26_00689 Multidrug resistance protein MexB low > 36

Not shown: 15 genomes with orthologs for QEN71_RS23260 only; 10 genomes with orthologs for QEN71_RS02525 only