| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas syringae pv. syringae B728a | 1.0 | Psyr_0485 | | Protein of unknown function DUF179 | 1.0 | Psyr_5088 | | regulatory protein, LuxR:Response regulator receiver | 0.39 | 4 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 1.00 | Psyr_0485 | | Protein of unknown function DUF179 | 1.00 | Psyr_5088 | | regulatory protein, LuxR:Response regulator receiver | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.75 | Pf1N1B4_2350 | | UPF0301 protein YqgE | 0.52 | Pf1N1B4_4408 | | two-component response regulator | low | > 87 |
| Pseudomonas sp. RS175 | 0.75 | PFR28_04234 | | hypothetical protein | 0.67 | PFR28_02521 | | Response regulator protein TmoT | — | — |
| Pseudomonas simiae WCS417 | 0.74 | PS417_26685 | | hypothetical protein | 0.41 | PS417_10320 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.74 | Pf6N2E2_4609 | | UPF0301 protein YqgE | 0.38 | Pf6N2E2_1724 | | DNA-binding response regulator, LuxR family | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.74 | AO356_13465 | | hypothetical protein | 0.68 | AO356_22615 | | nodulation protein NolW | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.73 | PfGW456L13_1019 | | UPF0301 protein YqgE | 0.36 | PfGW456L13_3749 | | Nitrogen regulation protein NR(I) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.69 | OH686_10925 | | UPF0301 protein YqgE | 0.50 | OH686_18645 | | Two-component transcriptional response regulator, LuxR family | low | > 80 |
| Pseudomonas putida KT2440 | 0.69 | PP_4995 | | putative protein possibly involved in the control of exopolysaccharide production | 0.38 | PP_3551 | | DNA-binding response regulator, LuxR family | low | > 96 |
| Ralstonia solanacearum GMI1000 | 0.46 | RS_RS03395 | | YqgE/AlgH family protein | 0.36 | RS_RS08045 | | DNA-binding response regulator | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_04814 | | putative transcriptional regulator | 0.51 | H281DRAFT_03395 | | two component transcriptional regulator, LuxR family | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS04220 | | hypothetical protein | 0.50 | BPHYT_RS11910 | | chemotaxis protein CheY | — | — |
| Ralstonia solanacearum PSI07 | 0.45 | RPSI07_RS20650 | | YqgE/AlgH family protein | 0.36 | RPSI07_RS15805 | | DNA-binding response regulator | — | — |
| Paraburkholderia graminis OAS925 | 0.45 | ABIE53_001128 | | putative transcriptional regulator | 0.54 | ABIE53_001505 | | FixJ family two-component response regulator | low | > 113 |
| Ralstonia solanacearum UW163 | 0.45 | UW163_RS00955 | | DUF179 domain-containing protein | 0.36 | UW163_RS14990 | | DNA-binding response regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.45 | RALBFv3_RS12610 | | DUF179 domain-containing protein | 0.36 | RALBFv3_RS01680 | | DNA-binding response regulator | — | — |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS24675 | | YqgE/AlgH family protein | 0.44 | ABID97_RS26300 | | response regulator | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.44 | RR42_RS15875 | | hypothetical protein | 0.50 | RR42_RS25965 | | LuxR family transcriptional regulator | low | > 128 |
| Variovorax sp. SCN45 | 0.44 | GFF2157 | | UPF0301 protein YqgE | 0.36 | GFF965 | | Two-component transcriptional response regulator, LuxR family | — | — |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS08610 | | YqgE/AlgH family protein | 0.36 | ABZR87_RS13480 | | response regulator transcription factor | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.43 | QEN71_RS25795 | | YqgE/AlgH family protein | 0.53 | QEN71_RS39350 | | response regulator transcription factor | — | — |
| Acidovorax sp. GW101-3H11 | 0.42 | Ac3H11_3981 | | UPF0301 protein YqgE | 0.35 | Ac3H11_4095 | | Nitrogen regulation protein NR(I) | low | > 79 |
| Shewanella sp. ANA-3 | 0.42 | Shewana3_1200 | | hypothetical protein (RefSeq) | 0.31 | Shewana3_3697 | | two component LuxR family transcriptional regulator (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.42 | SO3346 | | conserved hypothetical protein (NCBI ptt file) | 0.31 | SO4157 | | DNA-binding response regulator (NCBI ptt file) | low | > 76 |
| Marinobacter adhaerens HP15 | 0.42 | HP15_3510 | | transcriptional regulator | 0.39 | HP15_1053 | | two component transcriptional regulator, LuxR family | low | > 73 |
| Rhizobium sp. OAE497 | 0.42 | ABIE40_RS04185 | | YqgE/AlgH family protein | 0.48 | ABIE40_RS15215 | | response regulator | low | > 107 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.41 | GFF648 | | UPF0301 protein YqgE | 0.35 | GFF1673 | | Nitrogen regulation protein NR(I) | low | > 90 |
| Azospirillum brasilense Sp245 | 0.40 | AZOBR_RS10525 | | hypothetical protein | 0.54 | AZOBR_RS17625 | | Nodulation protein W | — | — |
| Dechlorosoma suillum PS | 0.40 | Dsui_0593 | | putative transcriptional regulator | 0.40 | Dsui_2511 | | response regulator | low | > 51 |
| Rhodopseudomonas palustris CGA009 | 0.40 | TX73_004710 | | YqgE/AlgH family protein | 0.48 | TX73_010870 | | response regulator | low | > 86 |
| Herbaspirillum seropedicae SmR1 | 0.40 | HSERO_RS02315 | | transcriptional regulator | 0.42 | HSERO_RS22535 | | LuxR family transcriptional regulator | low | > 78 |
| Castellaniella sp019104865 MT123 | 0.40 | ABCV34_RS10730 | | YqgE/AlgH family protein | 0.39 | ABCV34_RS04170 | | response regulator transcription factor | — | — |
| Azospirillum sp. SherDot2 | 0.39 | MPMX19_01077 | | hypothetical protein | 0.50 | MPMX19_03583 | | Response regulator protein TodT | — | — |
| Serratia liquefaciens MT49 | 0.39 | IAI46_21395 | | YqgE/AlgH family protein | 0.29 | IAI46_04860 | | response regulator transcription factor | low | > 86 |
| Agrobacterium fabrum C58 | 0.39 | Atu0781 | | hypothetical protein | 0.49 | Atu4774 | | two component response regulator | low | > 89 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS18565 | | YqgE/AlgH family protein | 0.67 | DDA3937_RS07235 | | response regulator transcription factor | low | > 74 |
| Pantoea sp. MT58 | 0.39 | IAI47_03610 | | YqgE/AlgH family protein | 0.40 | IAI47_20275 | | response regulator transcription factor | low | > 76 |
| Sinorhizobium meliloti 1021 | 0.38 | SMc00019 | | hypothetical protein | 0.40 | SM_b20869 | | two-component response regulator protein | low | > 103 |
| Shewanella amazonensis SB2B | 0.38 | Sama_2472 | | putative transcriptional regulator (RefSeq) | 0.32 | Sama_3183 | | response regulator receiver protein (RefSeq) | low | > 62 |
| Lysobacter sp. OAE881 | 0.38 | ABIE51_RS16025 | | YqgE/AlgH family protein | 0.55 | ABIE51_RS11970 | | response regulator transcription factor | low | > 62 |
| Dyella japonica UNC79MFTsu3.2 | 0.38 | ABZR86_RS10380 | | YqgE/AlgH family protein | 0.32 | ABZR86_RS13745 | | response regulator | — | — |
| Klebsiella michiganensis M5al | 0.38 | BWI76_RS24080 | | DUF179 domain-containing protein | 0.28 | BWI76_RS14640 | | DNA-binding response regulator | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.38 | GFF3050 | | UPF0301 protein YqgE | 0.28 | GFF3576 | | Tetrathionate reductase two-component response regulator | low | > 78 |
| Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_3083 | | protein of unknown function DUF179 (RefSeq) | 0.34 | Dshi_2568 | | two component transcriptional regulator, LuxR family (RefSeq) | low | > 64 |
| Shewanella loihica PV-4 | 0.35 | Shew_1144 | | hypothetical protein (RefSeq) | 0.42 | Shew_3240 | | two component LuxR family transcriptional regulator (RefSeq) | low | > 60 |
| Enterobacter asburiae PDN3 | 0.35 | EX28DRAFT_2986 | | Putative transcriptional regulator | 0.38 | EX28DRAFT_3507 | | Response regulator | low | > 76 |
| Enterobacter sp. TBS_079 | 0.35 | MPMX20_03806 | | hypothetical protein | 0.25 | MPMX20_01965 | | Response regulator protein TmoT | low | > 85 |
| Caulobacter crescentus NA1000 | 0.32 | CCNA_03506 | | putative transcriptional regulator | 0.34 | CCNA_00795 | | two-component response regulator FixJ | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.32 | CCNA_03506 | | putative transcriptional regulator | 0.34 | CCNA_00795 | | two-component response regulator FixJ | low | > 67 |
| Sphingomonas koreensis DSMZ 15582 | 0.30 | Ga0059261_4015 | | Putative transcriptional regulator | 0.33 | Ga0059261_3828 | | two component transcriptional regulator, LuxR family | low | > 68 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.29 | A4249_RS00260 | | YqgE/AlgH family protein | 0.30 | A4249_RS15535 | | response regulator | — | — |
Not shown: 42 genomes with orthologs for Psyr_0485 only; 0 genomes with orthologs for Psyr_5088 only