Conservation of cofitness between Psyr_3177 and Psyr_3435 in Pseudomonas syringae pv. syringae B728a

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_3177 Recombination protein MgsA 1.0 Psyr_3435 chemotaxis phosphatase, CheZ 0.31 20
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_3177 Recombination protein MgsA 1.00 Psyr_3435 chemotaxis phosphatase, CheZ low > 86
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_22185 recombination factor protein RarA 0.87 AO356_03720 protein phosphatase low > 104
Pseudomonas sp. RS175 0.92 PFR28_02606 Replication-associated recombination protein A 0.85 PFR28_00854 Protein phosphatase CheZ low > 88
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_299 FIG065221: Holliday junction DNA helicase 0.85 Pf6N2E2_2571 Chemotaxis response - phosphatase CheZ low > 103
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_4062 FIG065221: Holliday junction DNA helicase 0.85 Pf1N1B4_3628 Chemotaxis response - phosphatase CheZ — —
Pseudomonas putida KT2440 0.91 PP_4002 DNA-dependent ATPase required for recombination 0.79 PP_4339 Protein phosphatase CheZ low > 96
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_27640 recombination factor protein RarA 0.86 AO353_18795 protein phosphatase low > 101
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_2653 FIG065221: Holliday junction DNA helicase 0.85 PfGW456L13_4329 Chemotaxis response - phosphatase CheZ low > 87
Pseudomonas fluorescens SBW25 0.90 PFLU_RS18520 replication-associated recombination protein A 0.85 PFLU_RS21650 protein phosphatase CheZ low > 109
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS18520 replication-associated recombination protein A 0.85 PFLU_RS21650 protein phosphatase CheZ low > 109
Pseudomonas simiae WCS417 0.90 PS417_16480 recombination factor protein RarA 0.86 PS417_19685 protein phosphatase low > 88
Pseudomonas sp. S08-1 0.89 OH686_00270 Replication-associated recombination protein RarA 0.74 OH686_02720 Chemotaxis response - phosphatase CheZ low > 80
Pseudomonas stutzeri RCH2 0.87 Psest_2034 ATPase related to the helicase subunit of the Holliday junction resolvase 0.59 Psest_1742 Chemotaxis protein 0.15 31
Shewanella sp. ANA-3 0.59 Shewana3_2052 recombination factor protein RarA (RefSeq) 0.37 Shewana3_1361 chemotaxis phosphatase, CheZ (RefSeq) — —
Enterobacter sp. TBS_079 0.59 MPMX20_01554 Replication-associated recombination protein A 0.22 MPMX20_02785 Protein phosphatase CheZ low > 85
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2040 ATPase related to the helicase subunit of the Holliday junction resolvase 0.22 EX28DRAFT_0675 Chemotaxis protein low > 76
Shewanella loihica PV-4 0.59 Shew_2022 recombination factor protein RarA (RefSeq) 0.39 Shew_1385 chemotaxis phosphatase, CheZ (RefSeq) low > 60
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF4896 FIG065221: Holliday junction DNA helicase 0.22 GFF1662 Chemotaxis response - phosphatase CheZ low > 78
Rahnella sp. WP5 0.59 EX31_RS18515 replication-associated recombination protein A 0.22 EX31_RS11350 protein phosphatase CheZ low > 89
Dickeya dianthicola ME23 0.59 DZA65_RS09930 replication-associated recombination protein A 0.22 DZA65_RS14045 protein phosphatase CheZ low > 75
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_05630 replication-associated recombination protein A 0.31 CSW01_10325 protein phosphatase CheZ low > 62
Dickeya dianthicola 67-19 0.59 HGI48_RS09620 replication-associated recombination protein A 0.22 HGI48_RS13560 protein phosphatase CheZ low > 71
Shewanella oneidensis MR-1 0.59 SO2308 ATPase, AAA family (NCBI ptt file) 0.38 SO3208 cheZ chemotaxis protein CheZ (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.59 DDA3937_RS09605 replication-associated recombination protein A 0.22 DDA3937_RS13515 protein phosphatase CheZ low > 74
Shewanella amazonensis SB2B 0.58 Sama_1774 recombination factor protein RarA (RefSeq) 0.34 Sama_2278 putative chemotaxis phosphatase, CheZ (RefSeq) low > 62
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS04355 recombination factor protein RarA 0.24 RR42_RS35775 chemotaxis protein CheZ low > 128
Escherichia fergusonii Becca 0.58 EFB2_03169 Replication-associated recombination protein A 0.21 EFB2_02062 Protein phosphatase CheZ low > 86
Escherichia coli ECRC102 0.58 NIAGMN_03280 rarA replication-associated recombination protein RarA 0.21 NIAGMN_01900 cheZ protein phosphatase CheZ — —
Escherichia coli ECRC98 0.58 JDDGAC_09370 rarA replication-associated recombination protein RarA 0.21 JDDGAC_00735 cheZ protein phosphatase CheZ low > 86
Escherichia coli BW25113 0.58 b0892 ycaJ recombination protein (NCBI) 0.21 b1881 cheZ chemotaxis regulator, protein phosphatase for CheY (NCBI) low > 76
Escherichia coli ECOR38 0.58 HEPCGN_22950 rarA replication-associated recombination protein RarA 0.21 HEPCGN_04580 cheZ protein phosphatase CheZ low > 87
Escherichia coli BL21 0.58 ECD_00896 recombination intermediate processing DNA-dependent ATPase 0.21 ECD_01852 chemotaxis regulator, protein phosphatase for CheY low > 61
Escherichia coli ECRC99 0.58 KEDOAH_22175 rarA replication-associated recombination protein RarA 0.21 KEDOAH_01945 cheZ protein phosphatase CheZ — —
Escherichia coli ECOR27 0.58 NOLOHH_22130 rarA replication-associated recombination protein RarA 0.21 NOLOHH_16600 cheZ protein phosphatase CheZ 0.57 66
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_02776 Replication-associated recombination protein A 0.21 OHPLBJKB_01847 Protein phosphatase CheZ low > 73
Escherichia coli ECRC101 0.58 MCAODC_24950 rarA replication-associated recombination protein RarA 0.21 MCAODC_19245 cheZ protein phosphatase CheZ low > 87
Escherichia coli ECRC100 0.58 OKFHMN_05560 rarA replication-associated recombination protein RarA 0.21 OKFHMN_26160 cheZ protein phosphatase CheZ low > 80
Escherichia coli Nissle 1917 0.58 ECOLIN_RS04745 replication-associated recombination protein RarA 0.21 ECOLIN_RS10745 protein phosphatase CheZ — —
Serratia liquefaciens MT49 0.58 IAI46_08570 replication-associated recombination protein A 0.20 IAI46_16005 protein phosphatase CheZ low > 86
Escherichia coli ECRC62 0.58 BNILDI_20385 rarA replication-associated recombination protein RarA 0.21 BNILDI_15390 cheZ protein phosphatase CheZ low > 75
Erwinia tracheiphila SCR3 0.58 LU632_RS09755 replication-associated recombination protein A 0.21 LU632_RS13515 cheZ protein phosphatase CheZ low > 74
Pantoea sp. MT58 0.58 IAI47_12900 replication-associated recombination protein A 0.23 IAI47_08340 protein phosphatase CheZ low > 76
Paraburkholderia graminis OAS925 0.58 ABIE53_001292 putative ATPase 0.22 ABIE53_000117 chemotaxis protein CheZ low > 113
Pectobacterium carotovorum WPP14 0.58 HER17_RS12345 replication-associated recombination protein A 0.21 HER17_RS08130 protein phosphatase CheZ low > 75
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS03415 replication-associated recombination protein A 0.22 QEN71_RS28975 protein phosphatase CheZ low > 153
Ralstonia solanacearum PSI07 0.57 RPSI07_RS13205 replication-associated recombination protein A 0.25 RPSI07_RS06220 protein phosphatase CheZ low > 81
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS16030 replication-associated recombination protein A 0.26 ABZR87_RS18000 protein phosphatase CheZ low > 80
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS05100 ATPase AAA 0.23 BPHYT_RS18960 chemotaxis protein CheZ low > 109
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS04145 replication-associated recombination protein A 0.24 RALBFv3_RS17425 protein phosphatase CheZ low > 76
Ralstonia solanacearum UW163 0.57 UW163_RS09525 replication-associated recombination protein A 0.24 UW163_RS21725 protein phosphatase CheZ — —
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS09515 ATPase AAA 0.22 HSERO_RS10135 chemotaxis protein CheZ low > 78
Ralstonia solanacearum GMI1000 0.56 RS_RS11735 replication-associated recombination protein A 0.25 RS_RS03740 protein phosphatase CheZ low > 80
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_00180 Recombination protein MgsA 0.22 H281DRAFT_05749 chemotaxis protein CheZ low > 103
Dechlorosoma suillum PS 0.56 Dsui_1694 AAA ATPase 0.23 Dsui_1720 chemotaxis protein low > 51
Castellaniella sp019104865 MT123 0.56 ABCV34_RS07220 replication-associated recombination protein A 0.21 ABCV34_RS05805 protein phosphatase CheZ low > 48
Xanthomonas campestris pv. campestris strain 8004 0.54 Xcc-8004.2744.1 FIG065221: Holliday junction DNA helicase 0.15 Xcc-8004.2834.1 Chemotaxis response - phosphatase CheZ low > 74
Alteromonas macleodii MIT1002 0.54 MIT1002_02178 Replication-associated recombination protein A 0.34 MIT1002_01105 chemotaxis regulator CheZ low > 70
Variovorax sp. SCN45 0.54 GFF6034 Replication-associated recombination protein RarA 0.23 GFF5769 Chemotaxis response - phosphatase CheZ low > 127
Acidovorax sp. GW101-3H11 0.53 Ac3H11_1696 FIG065221: Holliday junction DNA helicase 0.19 Ac3H11_1386 Chemotaxis response - phosphatase CheZ low > 79
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_07580 rarA recombination factor protein RarA 0.15 OKGIIK_02840 cheZ chemotaxis protein CheZ — —
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS17320 replication-associated recombination protein A 0.13 LRK54_RS13590 protein phosphatase CheZ — —
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS01825 replication-associated recombination protein A 0.15 ABZR86_RS20275 protein phosphatase CheZ — —
Rhodanobacter denitrificans MT42 0.52 LRK55_RS17545 replication-associated recombination protein A 0.13 LRK55_RS13330 protein phosphatase CheZ — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF777 FIG065221: Holliday junction DNA helicase 0.17 GFF1434 Chemotaxis response - phosphatase CheZ low > 90

Not shown: 35 genomes with orthologs for Psyr_3177 only; 0 genomes with orthologs for Psyr_3435 only