Conservation of cofitness between PP_3378 and PP_4984 in Pseudomonas putida KT2440

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_3378 putative 2-ketogluconokinase 1.0 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.19 8
Pseudomonas simiae WCS417 0.68 PS417_12565 2-dehydro-3-deoxygluconokinase 0.89 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_4765 2-ketogluconate kinase (EC 2.7.1.13) 0.89 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 87
Pseudomonas fluorescens SBW25 0.68 PFLU_RS13250 sugar kinase 0.89 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 109
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS13250 sugar kinase 0.89 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 109
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_629 2-ketogluconate kinase (EC 2.7.1.13) 0.89 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 103
Pseudomonas fluorescens FW300-N2C3 0.66 AO356_24685 2-dehydro-3-deoxygluconokinase 0.89 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 104
Pseudomonas sp. RS175 0.66 PFR28_01598 2-dehydro-3-deoxygluconokinase 0.89 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 88
Pseudomonas fluorescens GW456-L13 0.65 PfGW456L13_2950 2-ketogluconate kinase (EC 2.7.1.13) 0.90 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 87
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_26875 2-dehydro-3-deoxygluconokinase 0.90 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 101
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_05211 2-dehydro-3-deoxygluconokinase 0.47 H281DRAFT_02094 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.24 82
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS11300 2-dehydro-3-deoxygluconokinase 0.48 BPHYT_RS02165 adenosylmethionine-8-amino-7-oxononanoate aminotransferase — —
Paraburkholderia sabiae LMG 24235 0.57 QEN71_RS35755 sugar kinase 0.47 QEN71_RS01100 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS09020 sugar kinase 0.46 ABZR87_RS12335 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 80
Enterobacter asburiae PDN3 0.55 EX28DRAFT_3815 Sugar kinases, ribokinase family 0.32 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase low > 76
Enterobacter sp. TBS_079 0.55 MPMX20_00179 2-dehydro-3-deoxygluconokinase 0.32 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 85
Klebsiella michiganensis M5al 0.54 BWI76_RS26950 2-dehydro-3-deoxygluconokinase 0.32 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 92
Serratia liquefaciens MT49 0.54 IAI46_00095 sugar kinase 0.33 IAI46_06520 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 86
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS07545 2-dehydro-3-deoxygluconokinase 0.45 HSERO_RS12250 adenosylmethionine--8-amino-7-oxononanoate aminotransferase low > 78
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS09470 2-dehydro-3-deoxygluconokinase 0.41 RR42_RS00925 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA low > 128
Variovorax sp. OAS795 0.53 ABID97_RS20030 sugar kinase 0.44 ABID97_RS16265 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 91
Variovorax sp. SCN45 0.53 GFF2716 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45) 0.45 GFF145 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 127
Pantoea sp. MT58 0.52 IAI47_00120 sugar kinase 0.30 IAI47_13535 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 76
Castellaniella sp019104865 MT123 0.51 ABCV34_RS08620 sugar kinase 0.28 ABCV34_RS15300 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 48
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS12620 sugar kinase 0.57 ABZR86_RS10225 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 74
Acidovorax sp. GW101-3H11 0.18 Ac3H11_700 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) 0.46 Ac3H11_3828 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 79
Erwinia tracheiphila SCR3 0.18 LU632_RS03295 aminoimidazole riboside kinase 0.32 LU632_RS09125 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECOR27 0.17 NOLOHH_14150 cscK aminoimidazole riboside kinase 0.31 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 57
Escherichia coli ECRC62 0.17 BNILDI_13005 cscK aminoimidazole riboside kinase 0.31 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECRC101 0.17 OKFHMN_22470 cscK aminoimidazole riboside kinase 0.31 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECOR38 0.17 HEPCGN_19180 aminoimidazole riboside kinase 0.31 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 85
Escherichia coli ECRC102 0.17 NIAGMN_20245 cscK aminoimidazole riboside kinase 0.31 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECRC101 0.17 MCAODC_13000 cscK aminoimidazole riboside kinase 0.31 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli ECRC98 0.17 JDDGAC_26430 cscK aminoimidazole riboside kinase 0.31 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF178 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) 0.48 GFF3993 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 90
Dickeya dianthicola ME23 0.17 DZA65_RS11450 carbohydrate kinase 0.31 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 75
Escherichia coli BL21 0.17 ECD_01741 putative kinase 0.31 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent — —
Escherichia fergusonii Becca 0.17 EFB2_02222 putative sugar kinase YdjH 0.31 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 86
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_17490 aminoimidazole riboside kinase 0.31 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA low > 62
Rahnella sp. WP5 0.17 EX31_RS00440 aminoimidazole riboside kinase 0.33 EX31_RS23690 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.47 13
Escherichia coli Nissle 1917 0.17 ECOLIN_RS09885 sugar kinase 0.31 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Escherichia coli BW25113 0.16 b1772 b1772 putative kinase (VIMSS) 0.31 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) low > 76
Azospirillum brasilense Sp245 0.16 AZOBR_RS29860 ketodeoxygluconokinase 0.31 AZOBR_RS31120 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 97
Escherichia coli HS(pFamp)R (ATCC 700891) 0.16 OHPLBJKB_01960 putative sugar kinase YdjH 0.31 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 73
Ralstonia solanacearum GMI1000 0.16 RS_RS22845 sugar kinase 0.45 RS_RS07430 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 80
Ralstonia solanacearum IBSBF1503 0.16 RALBFv3_RS18190 sugar kinase 0.45 RALBFv3_RS00815 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.28 43
Ralstonia solanacearum UW163 0.16 UW163_RS20940 sugar kinase 0.45 UW163_RS14150 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Pectobacterium carotovorum WPP14 0.16 HER17_RS19640 aminoimidazole riboside kinase 0.32 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 75
Ralstonia solanacearum PSI07 0.16 RPSI07_RS05445 sugar kinase 0.46 RPSI07_RS16705 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 81
Dickeya dianthicola 67-19 0.15 HGI48_RS01780 aminoimidazole riboside kinase 0.31 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 71
Escherichia coli ECRC99 0.15 KEDOAH_01345 rbsK sugar kinase 0.31 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Dickeya dadantii 3937 0.15 DDA3937_RS01855 aminoimidazole riboside kinase 0.32 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 74
Rhizobium sp. OAE497 0.15 ABIE40_RS02140 carbohydrate kinase 0.29 ABIE40_RS21060 adenosylmethionine--8-amino-7-oxononanoate transaminase — —
Alteromonas macleodii MIT1002 0.15 MIT1002_02434 2-dehydro-3-deoxygluconokinase 0.32 MIT1002_01378 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 70
Shewanella amazonensis SB2B 0.15 Sama_0561 Fructokinase (EC 2.7.1.4) (from data) 0.26 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) — —
Phaeobacter inhibens DSM 17395 0.15 PGA1_c07240 5-dehydro-2-deoxygluconokinase (EC 2.7.1.92) (from data) 0.29 PGA1_c09150 adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA low > 62
Agrobacterium fabrum C58 0.14 Atu3166 fructokinase 0.31 Atu4000 adenosylmethionine-8-amino-7-oxononanoate aminotransferase low > 89
Synechococcus elongatus PCC 7942 0.12 Synpcc7942_0116 cscK fructokinase 0.33 Synpcc7942_0031 bioA aminotransferase — —
Sphingomonas koreensis DSMZ 15582 0.12 Ga0059261_2965 Sugar kinases, ribokinase family 0.30 Ga0059261_3674 adenosylmethionine-8-amino-7-oxononanoate transaminase low > 68
Rhodopseudomonas palustris CGA009 0.12 TX73_024175 sugar kinase 0.32 TX73_015405 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.10 Xcc-8004.157.1 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) 0.49 Xcc-8004.1559.1 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) low > 74
Rhodanobacter sp. FW510-T8 0.10 OKGIIK_01685 rbsK carbohydrate kinase 0.56 OKGIIK_11015 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase low > 52
Phocaeicola dorei CL03T12C01 0.10 ABI39_RS13320 sugar kinase 0.31 ABI39_RS14245 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 72
Rhodanobacter denitrificans FW104-10B01 0.09 LRK54_RS05060 carbohydrate kinase 0.56 LRK54_RS04150 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 59
Rhodanobacter denitrificans MT42 0.09 LRK55_RS04840 carbohydrate kinase 0.56 LRK55_RS03920 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 63
Phocaeicola vulgatus CL09T03C04 0.09 HMPREF1058_RS10465 sugar kinase 0.31 HMPREF1058_RS17955 adenosylmethionine--8-amino-7-oxononanoate transaminase low > 67

Not shown: 6 genomes with orthologs for PP_3378 only; 27 genomes with orthologs for PP_4984 only